RNA–Protein interactions for RNA: ENST00000399353.5

ITSN1-210, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-210ENST00000399353 PRDM2Q13029 1718 aa18.28■□□□□ 0.52
ITSN1-210ENST00000399353 KIF3AQ9Y496 699 aa18.28■□□□□ 0.52
ITSN1-210ENST00000399353 TOPBP1Q92547 1522 aa18.28■□□□□ 0.52
ITSN1-210ENST00000399353 TTC12Q9H892 705 aaPredicted RBP18.27■□□□□ 0.52
ITSN1-210ENST00000399353 NUTM2DQ5VT03 806 aaPredicted RBP18.27■□□□□ 0.52
ITSN1-210ENST00000399353 ABCC5O15440 1437 aa18.26■□□□□ 0.51
ITSN1-210ENST00000399353 NUCB2P80303 420 aa18.25■□□□□ 0.51
ITSN1-210ENST00000399353 BCORL1Q5H9F3 1711 aa18.25■□□□□ 0.51
ITSN1-210ENST00000399353 EPRSP07814 1512 aaKnown RBP18.25■□□□□ 0.51
ITSN1-210ENST00000399353 ERICH4A6NGS2 130 aa18.25■□□□□ 0.51
ITSN1-210ENST00000399353 DMTNQ08495 405 aa18.25■□□□□ 0.51
ITSN1-210ENST00000399353 SPC24Q8NBT2 197 aa18.25■□□□□ 0.51
ITSN1-210ENST00000399353 PDIA4P13667 645 aaKnown RBP18.24■□□□□ 0.51
ITSN1-210ENST00000399353 SMC5Q8IY18 1101 aa18.24■□□□□ 0.51
ITSN1-210ENST00000399353 DRC7Q8IY82 874 aa18.24■□□□□ 0.51
ITSN1-210ENST00000399353 GDPD2Q9HCC8 539 aa18.24■□□□□ 0.51
ITSN1-210ENST00000399353 TRAK1Q9UPV9 953 aa18.24■□□□□ 0.51
ITSN1-210ENST00000399353 PKP1Q13835 747 aa18.24■□□□□ 0.51
ITSN1-210ENST00000399353 EXOSC9Q06265 439 aaKnown RBP18.23■□□□□ 0.51
ITSN1-210ENST00000399353 ZNF592Q92610 1267 aa18.23■□□□□ 0.51
ITSN1-210ENST00000399353 USP25Q9UHP3 1055 aa18.23■□□□□ 0.51
ITSN1-210ENST00000399353 DDX19BQ9UMR2 479 aa18.23■□□□□ 0.51
ITSN1-210ENST00000399353 HMGXB3Q12766 1538 aa18.23■□□□□ 0.51
ITSN1-210ENST00000399353 U2AF2P26368 475 aaKnown RBP eCLIP18.22■□□□□ 0.512e-6■■■□□ 14.6
ITSN1-210ENST00000399353 KCNJ4P48050 445 aa18.22■□□□□ 0.51
ITSN1-210ENST00000399353 KIF16BQ96L93 1317 aa18.22■□□□□ 0.51
ITSN1-210ENST00000399353 AEBP1Q8IUX7 1158 aa18.21■□□□□ 0.51
ITSN1-210ENST00000399353 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.21■□□□□ 0.51
ITSN1-210ENST00000399353 HMGN5P82970 282 aaKnown RBP18.21■□□□□ 0.51
ITSN1-210ENST00000399353 STK26Q9P289 416 aa18.21■□□□□ 0.51
ITSN1-210ENST00000399353 NOB1Q9ULX3 412 aaKnown RBP18.21■□□□□ 0.51
ITSN1-210ENST00000399353 NPHP1O15259 732 aa18.2■□□□□ 0.5
ITSN1-210ENST00000399353 CHMP3Q9Y3E7 222 aa18.2■□□□□ 0.5
ITSN1-210ENST00000399353 TESK2Q96S53 571 aa18.2■□□□□ 0.5
ITSN1-210ENST00000399353 CFAP43Q8NDM7 1665 aa18.2■□□□□ 0.5
ITSN1-210ENST00000399353 TMEM57Q8N5G2 664 aa18.19■□□□□ 0.5
ITSN1-210ENST00000399353 DNAJC5BQ9UF47 199 aa18.19■□□□□ 0.5
ITSN1-210ENST00000399353 STAG3Q9UJ98 1225 aa18.19■□□□□ 0.5
ITSN1-210ENST00000399353 TERF1P54274 439 aa18.19■□□□□ 0.5
ITSN1-210ENST00000399353 ZNF692Q9BU19 519 aaPredicted RBP18.19■□□□□ 0.5
ITSN1-210ENST00000399353 TSPY26PQ9H489 355 aa18.19■□□□□ 0.5
ITSN1-210ENST00000399353 BLMP54132 1417 aaPredicted RBP18.19■□□□□ 0.5
ITSN1-210ENST00000399353 ZNF500O60304 480 aaPredicted RBP18.19■□□□□ 0.5
ITSN1-210ENST00000399353 ZSCAN20P17040 1043 aaPredicted RBP18.19■□□□□ 0.5
ITSN1-210ENST00000399353 CHD1LQ86WJ1 897 aa18.19■□□□□ 0.5
ITSN1-210ENST00000399353 ST18O60284 1047 aa18.18■□□□□ 0.5
ITSN1-210ENST00000399353 ZGPATQ8N5A5 531 aaKnown RBP18.18■□□□□ 0.5
ITSN1-210ENST00000399353 PLEKHH2Q8IVE3 1493 aa18.18■□□□□ 0.5
ITSN1-210ENST00000399353 TNNT3P45378 269 aaPredicted RBP18.18■□□□□ 0.5
ITSN1-210ENST00000399353 AEBP2Q6ZN18 517 aaPredicted RBP18.18■□□□□ 0.5
ITSN1-210ENST00000399353 RUNDC1Q96C34 613 aa18.18■□□□□ 0.5
ITSN1-210ENST00000399353 ERBINQ96RT1 1412 aa18.18■□□□□ 0.5
ITSN1-210ENST00000399353 ATP2B3Q16720 1220 aa18.17■□□□□ 0.5
ITSN1-210ENST00000399353 ZMYM4Q5VZL5 1548 aa18.17■□□□□ 0.5
ITSN1-210ENST00000399353 GTF2E1P29083 439 aaPredicted RBP18.17■□□□□ 0.5
ITSN1-210ENST00000399353 NOLC1Q14978 699 aaKnown RBP eCLIP18.17■□□□□ 0.5
ITSN1-210ENST00000399353 TBC1D9Q6ZT07 1266 aa18.17■□□□□ 0.5
ITSN1-210ENST00000399353 STAC3Q96MF2 364 aa18.17■□□□□ 0.5
ITSN1-210ENST00000399353 SYAP1Q96A49 352 aaPredicted RBP18.17■□□□□ 0.5
ITSN1-210ENST00000399353 SRPK2P78362 688 aaKnown RBP18.17■□□□□ 0.5
ITSN1-210ENST00000399353 ZNF521Q96K83 1311 aa18.16■□□□□ 0.5
ITSN1-210ENST00000399353 ABCA10Q8WWZ4 1543 aa18.16■□□□□ 0.5
ITSN1-210ENST00000399353 CARMIL2Q6F5E8 1435 aa18.16■□□□□ 0.5
ITSN1-210ENST00000399353 TRIM27P14373 513 aa18.16■□□□□ 0.5
ITSN1-210ENST00000399353 PAXIP1Q6ZW49 1069 aaPredicted RBP18.16■□□□□ 0.5
ITSN1-210ENST00000399353 KIF3BO15066 747 aa18.16■□□□□ 0.5
ITSN1-210ENST00000399353 SNX21Q969T3 373 aa18.16■□□□□ 0.5
ITSN1-210ENST00000399353 IPO8O15397 1037 aaKnown RBP18.15■□□□□ 0.5
ITSN1-210ENST00000399353 CASC1Q6TDU7 716 aa18.15■□□□□ 0.5
ITSN1-210ENST00000399353 GTPBP4Q9BZE4 634 aaKnown RBP18.15■□□□□ 0.5
ITSN1-210ENST00000399353 SSH1Q8WYL5 1049 aa18.15■□□□□ 0.5
ITSN1-210ENST00000399353 LETM1O95202 739 aaPredicted RBP18.15■□□□□ 0.5
ITSN1-210ENST00000399353 TMEM63CQ9P1W3 806 aa18.14■□□□□ 0.49
ITSN1-210ENST00000399353 ROCK1Q13464 1354 aa18.14■□□□□ 0.49
ITSN1-210ENST00000399353 MTHFSP49914 203 aa18.14■□□□□ 0.49
ITSN1-210ENST00000399353 HS1BP3Q53T59 392 aa18.14■□□□□ 0.49
ITSN1-210ENST00000399353 MYRIPQ8NFW9 859 aa18.14■□□□□ 0.49
ITSN1-210ENST00000399353 LRSAM1Q6UWE0 723 aa18.13■□□□□ 0.49
ITSN1-210ENST00000399353 LMBRD1Q9NUN5 540 aa18.13■□□□□ 0.49
ITSN1-210ENST00000399353 SNAPC4Q5SXM2 1469 aa18.13■□□□□ 0.49
ITSN1-210ENST00000399353 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.13■□□□□ 0.49
ITSN1-210ENST00000399353 KIF20AO95235 890 aa18.13■□□□□ 0.49
ITSN1-210ENST00000399353 GGT6Q6P531 493 aa18.12■□□□□ 0.49
ITSN1-210ENST00000399353 ATF7IPQ6VMQ6 1270 aa18.12■□□□□ 0.49
ITSN1-210ENST00000399353 NEK4P51957 841 aa18.12■□□□□ 0.49
ITSN1-210ENST00000399353 ZNF445P59923 1031 aa18.12■□□□□ 0.49
ITSN1-210ENST00000399353 DIAPH3Q9NSV4 1193 aa18.12■□□□□ 0.49
ITSN1-210ENST00000399353 IFT57Q9NWB7 429 aa18.12■□□□□ 0.49
ITSN1-210ENST00000399353 GRIN2BQ13224 1484 aa18.11■□□□□ 0.49
ITSN1-210ENST00000399353 CFAP70Q5T0N1 1121 aa18.11■□□□□ 0.49
ITSN1-210ENST00000399353 BCL2L12Q9HB09 334 aa18.11■□□□□ 0.49
ITSN1-210ENST00000399353 RALGAPBQ86X10 1494 aa18.11■□□□□ 0.49
ITSN1-210ENST00000399353 CERS3Q8IU89 383 aa18.11■□□□□ 0.49
ITSN1-210ENST00000399353 NSFL1CQ9UNZ2 370 aaKnown RBP18.11■□□□□ 0.49
ITSN1-210ENST00000399353 THOC2Q8NI27 1593 aaKnown RBP18.11■□□□□ 0.49
ITSN1-210ENST00000399353 CDC45O75419 566 aa18.11■□□□□ 0.49
ITSN1-210ENST00000399353 MCM5P33992 734 aa18.11■□□□□ 0.49
ITSN1-210ENST00000399353 HECW1Q76N89 1606 aa18.11■□□□□ 0.49
ITSN1-210ENST00000399353 C9orf84Q5VXU9 1444 aa18.1■□□□□ 0.49
ITSN1-210ENST00000399353 UGGT2Q9NYU1 1516 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms