RNA–Protein interactions for RNA: ENST00000399338.8

ITSN1-207, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-207ENST00000399338 CHIC2Q9UKJ5 165 aa13.66□□□□□ -0.22
ITSN1-207ENST00000399338 BAG4O95429 457 aaKnown RBP13.66□□□□□ -0.22
ITSN1-207ENST00000399338 PIBF1Q8WXW3 757 aa13.66□□□□□ -0.22
ITSN1-207ENST00000399338 SSFA2P28290 1259 aa13.66□□□□□ -0.22
ITSN1-207ENST00000399338 AEBP1Q8IUX7 1158 aa13.66□□□□□ -0.22
ITSN1-207ENST00000399338 NKTRP30414 1462 aaKnown RBP13.66□□□□□ -0.22
ITSN1-207ENST00000399338 GAPVD1Q14C86 1478 aa13.66□□□□□ -0.22
ITSN1-207ENST00000399338 TRIM6-TRIM34B2RNG4 842 aa13.65□□□□□ -0.22
ITSN1-207ENST00000399338 P3H3Q8IVL6 736 aa13.65□□□□□ -0.22
ITSN1-207ENST00000399338 PMFBP1Q8TBY8 1022 aa13.65□□□□□ -0.22
ITSN1-207ENST00000399338 TRIM34Q9BYJ4 488 aa13.65□□□□□ -0.22
ITSN1-207ENST00000399338 BCCIPQ9P287 314 aaKnown RBP eCLIP13.65□□□□□ -0.22
ITSN1-207ENST00000399338 CAVIN1Q6NZI2 390 aaKnown RBP13.65□□□□□ -0.22
ITSN1-207ENST00000399338 ADAMTS8Q9UP79 889 aa13.65□□□□□ -0.22
ITSN1-207ENST00000399338 SUPT6HQ7KZ85 1726 aaKnown RBP13.65□□□□□ -0.22
ITSN1-207ENST00000399338 GEMIN8Q9NWZ8 242 aaKnown RBP13.64□□□□□ -0.23
ITSN1-207ENST00000399338 UHRF1BP1Q6BDS2 1440 aa13.64□□□□□ -0.23
ITSN1-207ENST00000399338 ABCA10Q8WWZ4 1543 aa13.64□□□□□ -0.23
ITSN1-207ENST00000399338 TSPYL1Q9H0U9 437 aa13.64□□□□□ -0.23
ITSN1-207ENST00000399338 DNMBPQ6XZF7 1577 aa13.64□□□□□ -0.23
ITSN1-207ENST00000399338 NOLC1Q14978 699 aaKnown RBP eCLIP13.64□□□□□ -0.23
ITSN1-207ENST00000399338 ARHGEF11O15085 1522 aa13.63□□□□□ -0.23
ITSN1-207ENST00000399338 SNAPC4Q5SXM2 1469 aa13.63□□□□□ -0.23
ITSN1-207ENST00000399338 FKBP5Q13451 457 aaPredicted RBP13.63□□□□□ -0.23
ITSN1-207ENST00000399338 SAMD1Q6SPF0 538 aaPredicted RBP13.63□□□□□ -0.23
ITSN1-207ENST00000399338 NGEFQ8N5V2 710 aa13.63□□□□□ -0.23
ITSN1-207ENST00000399338 HDAC5Q9UQL6 1122 aa13.63□□□□□ -0.23
ITSN1-207ENST00000399338 CTIFO43310 598 aaKnown RBP13.62□□□□□ -0.23
ITSN1-207ENST00000399338 TERF2Q15554 542 aa13.62□□□□□ -0.23
ITSN1-207ENST00000399338 SPTLC3Q9NUV7 552 aa13.62□□□□□ -0.23
ITSN1-207ENST00000399338 KCNG1Q9UIX4 513 aa13.62□□□□□ -0.23
ITSN1-207ENST00000399338 UGGT2Q9NYU1 1516 aa13.62□□□□□ -0.23
ITSN1-207ENST00000399338 LMBRD1Q9NUN5 540 aa13.62□□□□□ -0.23
ITSN1-207ENST00000399338 CALCOCO1Q9P1Z2 691 aa13.62□□□□□ -0.23
ITSN1-207ENST00000399338 SHROOM2Q13796 1616 aa13.62□□□□□ -0.23
ITSN1-207ENST00000399338 NPC1L1Q9UHC9 1359 aa13.62□□□□□ -0.23
ITSN1-207ENST00000399338 LRRIQ1Q96JM4 1722 aa13.62□□□□□ -0.23
ITSN1-207ENST00000399338 COG6Q9Y2V7 657 aa13.62□□□□□ -0.23
ITSN1-207ENST00000399338 ST20-MTHFSA0A0A6YYL1 179 aa13.61□□□□□ -0.23
ITSN1-207ENST00000399338 CLGNO14967 610 aa13.61□□□□□ -0.23
ITSN1-207ENST00000399338 PCDHB15Q9Y5E8 787 aa13.61□□□□□ -0.23
ITSN1-207ENST00000399338 LRSAM1Q6UWE0 723 aa13.61□□□□□ -0.23
ITSN1-207ENST00000399338 ANKRD30AQ9BXX3 1397 aa13.6□□□□□ -0.23
ITSN1-207ENST00000399338 ZBTB7CA1YPR0 619 aa13.6□□□□□ -0.23
ITSN1-207ENST00000399338 PANK1Q8TE04 598 aa13.6□□□□□ -0.23
ITSN1-207ENST00000399338 CTNNA3Q9UI47 895 aa13.6□□□□□ -0.23
ITSN1-207ENST00000399338 EFCC1Q9HA90 598 aa13.6□□□□□ -0.23
ITSN1-207ENST00000399338 ZBTB9Q96C00 473 aa13.59□□□□□ -0.23
ITSN1-207ENST00000399338 SPINK5Q9NQ38 1064 aaPredicted RBP13.59□□□□□ -0.23
ITSN1-207ENST00000399338 CARD11Q9BXL7 1154 aa13.59□□□□□ -0.23
ITSN1-207ENST00000399338 DDX41Q9UJV9 622 aaKnown RBP13.59□□□□□ -0.23
ITSN1-207ENST00000399338 CHMP4CQ96CF2 233 aa13.59□□□□□ -0.23
ITSN1-207ENST00000399338 FEZ2Q9UHY8 353 aaPredicted RBP13.59□□□□□ -0.23
ITSN1-207ENST00000399338 MORC2Q9Y6X9 1032 aaPredicted RBP13.59□□□□□ -0.23
ITSN1-207ENST00000399338 SAMD9Q5K651 1589 aa13.58□□□□□ -0.23
ITSN1-207ENST00000399338 PTMAP06454 111 aaKnown RBP13.58□□□□□ -0.24
ITSN1-207ENST00000399338 EHBP1L1Q8N3D4 1523 aa13.57□□□□□ -0.24
ITSN1-207ENST00000399338 PLXNC1O60486 1568 aa13.57□□□□□ -0.24
ITSN1-207ENST00000399338 RIOK3O14730 519 aaKnown RBP13.57□□□□□ -0.24
ITSN1-207ENST00000399338 CD2BP2O95400 341 aaKnown RBP13.57□□□□□ -0.24
ITSN1-207ENST00000399338 MCTP1Q6DN14 999 aa13.57□□□□□ -0.24
ITSN1-207ENST00000399338 KIF2CQ99661 725 aa13.57□□□□□ -0.24
ITSN1-207ENST00000399338 K7ELQ4 463 aaPredicted RBP13.57□□□□□ -0.24
ITSN1-207ENST00000399338 CC2D1BQ5T0F9 858 aaKnown RBP13.57□□□□□ -0.24
ITSN1-207ENST00000399338 FOXD4L1Q9NU39 408 aa13.57□□□□□ -0.24
ITSN1-207ENST00000399338 GPT2Q8TD30 523 aa13.56□□□□□ -0.24
ITSN1-207ENST00000399338 SLC4A1APQ9BWU0 796 aaKnown RBP13.56□□□□□ -0.24
ITSN1-207ENST00000399338 FANCD2Q9BXW9 1451 aa13.56□□□□□ -0.24
ITSN1-207ENST00000399338 MYCNP04198 464 aaPredicted RBP13.56□□□□□ -0.24
ITSN1-207ENST00000399338 AXDND1Q5T1B0 1012 aaPredicted RBP13.56□□□□□ -0.24
ITSN1-207ENST00000399338 DIAPH3Q9NSV4 1193 aa13.56□□□□□ -0.24
ITSN1-207ENST00000399338 RBM27Q9P2N5 1060 aaKnown RBP13.56□□□□□ -0.24
ITSN1-207ENST00000399338 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.55□□□□□ -0.24
ITSN1-207ENST00000399338 AK9Q5TCS8 1911 aa13.55□□□□□ -0.24
ITSN1-207ENST00000399338 SYCP1Q15431 976 aa13.55□□□□□ -0.24
ITSN1-207ENST00000399338 GAS2L2Q8NHY3 880 aa13.55□□□□□ -0.24
ITSN1-207ENST00000399338 RWDD1Q9H446 243 aaPredicted RBP13.55□□□□□ -0.24
ITSN1-207ENST00000399338 FAM193AP78312 1265 aa13.55□□□□□ -0.24
ITSN1-207ENST00000399338 NCBP1Q09161 790 aaKnown RBP13.55□□□□□ -0.24
ITSN1-207ENST00000399338 C17orf53Q8N3J3 647 aaPredicted RBP13.55□□□□□ -0.24
ITSN1-207ENST00000399338 CYP2E1P05181 493 aaPredicted RBP13.54□□□□□ -0.24
ITSN1-207ENST00000399338 CAMSAP2Q08AD1 1489 aa13.54□□□□□ -0.24
ITSN1-207ENST00000399338 FAM135AQ9P2D6 1515 aa13.54□□□□□ -0.24
ITSN1-207ENST00000399338 TMEM63CQ9P1W3 806 aa13.54□□□□□ -0.24
ITSN1-207ENST00000399338 PZPP20742 1482 aa13.54□□□□□ -0.24
ITSN1-207ENST00000399338 POLA1P09884 1462 aaPredicted RBP13.53□□□□□ -0.24
ITSN1-207ENST00000399338 TOPBP1Q92547 1522 aa13.53□□□□□ -0.24
ITSN1-207ENST00000399338 SYCE3A1L190 88 aa13.53□□□□□ -0.24
ITSN1-207ENST00000399338 CNPY4Q8N129 248 aa13.53□□□□□ -0.24
ITSN1-207ENST00000399338 ZNF622Q969S3 477 aaKnown RBP eCLIP13.53□□□□□ -0.24
ITSN1-207ENST00000399338 ROCK1Q13464 1354 aa13.52□□□□□ -0.24
ITSN1-207ENST00000399338 APPP05067 770 aa13.51□□□□□ -0.25
ITSN1-207ENST00000399338 NOP2P46087 812 aaKnown RBP13.51□□□□□ -0.25
ITSN1-207ENST00000399338 FAM53CQ9NYF3 392 aa13.51□□□□□ -0.25
ITSN1-207ENST00000399338 LOC102724159A0A0B4J2E5 919 aa13.51□□□□□ -0.25
ITSN1-207ENST00000399338 PWP2Q15269 919 aaKnown RBP13.51□□□□□ -0.25
ITSN1-207ENST00000399338 CREBRFQ8IUR6 639 aa13.51□□□□□ -0.25
ITSN1-207ENST00000399338 RNF214Q8ND24 703 aa13.51□□□□□ -0.25
ITSN1-207ENST00000399338 KIF18AQ8NI77 898 aa13.51□□□□□ -0.25
ITSN1-207ENST00000399338 GRIN2BQ13224 1484 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms