RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 UPF2Q9HAU5 1272 aaKnown RBP17.89■□□□□ 0.45
APOB-202ENST00000399256 RICTORQ6R327 1708 aa17.88■□□□□ 0.45
APOB-202ENST00000399256 TBC1D2Q9BYX2 928 aa17.88■□□□□ 0.45
APOB-202ENST00000399256 HECW2Q9P2P5 1572 aa17.88■□□□□ 0.45
APOB-202ENST00000399256 RRP7AQ9Y3A4 280 aaKnown RBP17.87■□□□□ 0.45
APOB-202ENST00000399256 PCDHB15Q9Y5E8 787 aa17.87■□□□□ 0.45
APOB-202ENST00000399256 MLH3Q9UHC1 1453 aa17.87■□□□□ 0.45
APOB-202ENST00000399256 NINLQ9Y2I6 1382 aa17.87■□□□□ 0.45
APOB-202ENST00000399256 TBC1D32Q96NH3 1257 aa17.87■□□□□ 0.45
APOB-202ENST00000399256 BCL2L13Q9BXK5 485 aa17.86■□□□□ 0.45
APOB-202ENST00000399256 CARD14Q9BXL6 1004 aa17.86■□□□□ 0.45
APOB-202ENST00000399256 PDZRN3Q9UPQ7 1066 aa17.86■□□□□ 0.45
APOB-202ENST00000399256 RLBP1P12271 317 aa17.85■□□□□ 0.45
APOB-202ENST00000399256 PMFBP1Q8TBY8 1022 aa17.85■□□□□ 0.45
APOB-202ENST00000399256 GZF1Q9H116 711 aaPredicted RBP17.85■□□□□ 0.45
APOB-202ENST00000399256 FRMPD1Q5SYB0 1578 aa17.85■□□□□ 0.45
APOB-202ENST00000399256 RAPGEF3O95398 923 aa17.84■□□□□ 0.45
APOB-202ENST00000399256 RARSP54136 660 aaKnown RBP17.84■□□□□ 0.45
APOB-202ENST00000399256 KDM5AP29375 1690 aaKnown RBP17.84■□□□□ 0.45
APOB-202ENST00000399256 TNNT2P45379 298 aaPredicted RBP17.83■□□□□ 0.44
APOB-202ENST00000399256 SPHKAPQ2M3C7 1700 aa17.83■□□□□ 0.44
APOB-202ENST00000399256 ABCA6Q8N139 1617 aa17.82■□□□□ 0.44
APOB-202ENST00000399256 NGEFQ8N5V2 710 aa17.82■□□□□ 0.44
APOB-202ENST00000399256 DEPDC5O75140 1603 aa17.82■□□□□ 0.44
APOB-202ENST00000399256 XRCC6P12956 609 aaKnown RBP eCLIP17.81■□□□□ 0.441e-8■■■■■ 35.6
APOB-202ENST00000399256 GOLGA6L3A6NEY3 463 aa17.81■□□□□ 0.44
APOB-202ENST00000399256 CEP152O94986 1710 aa17.8■□□□□ 0.44
APOB-202ENST00000399256 PANK2Q9BZ23 570 aa17.8■□□□□ 0.44
APOB-202ENST00000399256 DNAJC5Q9H3Z4 198 aa17.8■□□□□ 0.44
APOB-202ENST00000399256 CFAP70Q5T0N1 1121 aa17.79■□□□□ 0.44
APOB-202ENST00000399256 ERVK-7P63135 1459 aa17.79■□□□□ 0.44
APOB-202ENST00000399256 MCM4P33991 863 aa17.79■□□□□ 0.44
APOB-202ENST00000399256 CLTCL1P53675 1640 aa17.78■□□□□ 0.44
APOB-202ENST00000399256 DIP2CQ9Y2E4 1556 aa17.78■□□□□ 0.44
APOB-202ENST00000399256 TRPM2O94759 1503 aa17.78■□□□□ 0.44
APOB-202ENST00000399256 RWDD1Q9H446 243 aaPredicted RBP17.78■□□□□ 0.44
APOB-202ENST00000399256 TCP11L2Q8N4U5 519 aa17.77■□□□□ 0.44
APOB-202ENST00000399256 POLR3AO14802 1390 aaPredicted RBP17.77■□□□□ 0.44
APOB-202ENST00000399256 MROH1Q8NDA8 1641 aa17.76■□□□□ 0.43
APOB-202ENST00000399256 MFAP1P55081 439 aaKnown RBP17.76■□□□□ 0.43
APOB-202ENST00000399256 RUNDC1Q96C34 613 aa17.76■□□□□ 0.43
APOB-202ENST00000399256 FSD2A1L4K1 749 aa17.76■□□□□ 0.43
APOB-202ENST00000399256 MORC1Q86VD1 984 aa17.75■□□□□ 0.43
APOB-202ENST00000399256 NAP1L5Q96NT1 182 aaPredicted RBP17.75■□□□□ 0.43
APOB-202ENST00000399256 VWDEQ8N2E2 1590 aa17.74■□□□□ 0.43
APOB-202ENST00000399256 YEATS2Q9ULM3 1422 aa17.74■□□□□ 0.43
APOB-202ENST00000399256 KIF3BO15066 747 aa17.74■□□□□ 0.43
APOB-202ENST00000399256 AAMPQ13685 434 aa17.74■□□□□ 0.43
APOB-202ENST00000399256 STAC3Q96MF2 364 aa17.74■□□□□ 0.43
APOB-202ENST00000399256 C22orf23Q9BZE7 217 aa17.74■□□□□ 0.43
APOB-202ENST00000399256 ZMYM3Q14202 1370 aa17.73■□□□□ 0.43
APOB-202ENST00000399256 TRAK2O60296 914 aa17.73■□□□□ 0.43
APOB-202ENST00000399256 CHMP5Q9NZZ3 219 aa17.72■□□□□ 0.43
APOB-202ENST00000399256 PTPRTO14522 1441 aa17.72■□□□□ 0.43
APOB-202ENST00000399256 ADGRF5Q8IZF2 1346 aa17.72■□□□□ 0.43
APOB-202ENST00000399256 SHPRHQ149N8 1683 aa17.72■□□□□ 0.43
APOB-202ENST00000399256 NSD3Q9BZ95 1437 aa17.72■□□□□ 0.43
APOB-202ENST00000399256 PNNQ9H307 717 aaKnown RBP17.72■□□□□ 0.43
APOB-202ENST00000399256 MVPQ14764 893 aaKnown RBP17.71■□□□□ 0.43
APOB-202ENST00000399256 IQSEC2Q5JU85 1478 aa17.7■□□□□ 0.42
APOB-202ENST00000399256 WDR63Q8IWG1 891 aa17.7■□□□□ 0.42
APOB-202ENST00000399256 FTSJ3Q8IY81 847 aaKnown RBP17.7■□□□□ 0.42
APOB-202ENST00000399256 TET3O43151 1660 aa17.69■□□□□ 0.42
APOB-202ENST00000399256 PHF23Q9BUL5 403 aaPredicted RBP17.69■□□□□ 0.42
APOB-202ENST00000399256 KANK1Q14678 1352 aa17.68■□□□□ 0.42
APOB-202ENST00000399256 CLCN1P35523 988 aa17.68■□□□□ 0.42
APOB-202ENST00000399256 SLC12A5Q9H2X9 1139 aa17.67■□□□□ 0.42
APOB-202ENST00000399256 KIAA1210Q9ULL0 1709 aa17.67■□□□□ 0.42
APOB-202ENST00000399256 SLC24A1O60721 1099 aa17.67■□□□□ 0.42
APOB-202ENST00000399256 MTHFSP49914 203 aa17.67■□□□□ 0.42
APOB-202ENST00000399256 ZKSCAN2Q63HK3 967 aa17.67■□□□□ 0.42
APOB-202ENST00000399256 DZIP1LQ8IYY4 767 aaKnown RBP17.67■□□□□ 0.42
APOB-202ENST00000399256 UGGT1Q9NYU2 1555 aa17.67■□□□□ 0.42
APOB-202ENST00000399256 HSCBQ8IWL3 235 aa17.66■□□□□ 0.42
APOB-202ENST00000399256 MYH16Q9H6N6 1097 aa17.66■□□□□ 0.42
APOB-202ENST00000399256 MRE11P49959 708 aa17.65■□□□□ 0.42
APOB-202ENST00000399256 TSR2Q969E8 191 aaKnown RBP17.65■□□□□ 0.42
APOB-202ENST00000399256 LMTK2Q8IWU2 1503 aa17.65■□□□□ 0.42
APOB-202ENST00000399256 GRPEL1Q9HAV7 217 aa17.64■□□□□ 0.41
APOB-202ENST00000399256 REREQ9P2R6 1566 aa17.63■□□□□ 0.41
APOB-202ENST00000399256 SMC4Q9NTJ3 1288 aa17.63■□□□□ 0.41
APOB-202ENST00000399256 ITPRIPQ8IWB1 547 aa17.63■□□□□ 0.41
APOB-202ENST00000399256 TRAK1Q9UPV9 953 aa17.63■□□□□ 0.41
APOB-202ENST00000399256 U2AF1L5P0DN76 240 aaPredicted RBP17.63■□□□□ 0.41
APOB-202ENST00000399256 U2AF1Q01081 240 aaKnown RBP eCLIP17.63■□□□□ 0.412e-11■■□□□ 11.5
APOB-202ENST00000399256 CCDC27Q2M243 656 aa17.63■□□□□ 0.41
APOB-202ENST00000399256 CFAP53Q96M91 514 aa17.63■□□□□ 0.41
APOB-202ENST00000399256 ZNF692Q9BU19 519 aaPredicted RBP17.63■□□□□ 0.41
APOB-202ENST00000399256 EFCAB6Q5THR3 1501 aa17.63■□□□□ 0.41
APOB-202ENST00000399256 ARHGEF40Q8TER5 1519 aa17.63■□□□□ 0.41
APOB-202ENST00000399256 DDX11L8A8MPP1 907 aa17.62■□□□□ 0.41
APOB-202ENST00000399256 MYOM2P54296 1465 aa17.61■□□□□ 0.41
APOB-202ENST00000399256 TRIM27P14373 513 aa17.61■□□□□ 0.41
APOB-202ENST00000399256 TRHP20396 242 aaPredicted RBP17.61■□□□□ 0.41
APOB-202ENST00000399256 GGT6Q6P531 493 aa17.6■□□□□ 0.41
APOB-202ENST00000399256 HSP90AA1P07900 732 aaKnown RBP17.6■□□□□ 0.41
APOB-202ENST00000399256 EXOSC9Q06265 439 aaKnown RBP17.6■□□□□ 0.41
APOB-202ENST00000399256 ABCC3O15438 1527 aa17.59■□□□□ 0.41
APOB-202ENST00000399256 ERBB4Q15303 1308 aa17.59■□□□□ 0.41
APOB-202ENST00000399256 SIGLEC1Q9BZZ2 1709 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms