RNA–Protein interactions for RNA: ENST00000398637.9

SLC38A1-201, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 8,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-201ENST00000398637 HMGB2P26583 209 aaKnown RBP13.8□□□□□ -0.2
SLC38A1-201ENST00000398637 SOGA1O94964 1423 aa13.8□□□□□ -0.2
SLC38A1-201ENST00000398637 RNF20Q5VTR2 975 aa13.8□□□□□ -0.2
SLC38A1-201ENST00000398637 NGLY1Q96IV0 654 aa13.8□□□□□ -0.2
SLC38A1-201ENST00000398637 CCDC173Q0VFZ6 552 aa13.79□□□□□ -0.2
SLC38A1-201ENST00000398637 TTC16Q8NEE8 873 aa13.79□□□□□ -0.2
SLC38A1-201ENST00000398637 CABP4P57796 275 aa13.79□□□□□ -0.2
SLC38A1-201ENST00000398637 BCL2L13Q9BXK5 485 aa13.79□□□□□ -0.2
SLC38A1-201ENST00000398637 JPH4Q96JJ6 628 aa13.78□□□□□ -0.2
SLC38A1-201ENST00000398637 UACAQ9BZF9 1416 aa13.78□□□□□ -0.2
SLC38A1-201ENST00000398637 CEP162Q5TB80 1403 aa13.78□□□□□ -0.2
SLC38A1-201ENST00000398637 NOP58Q9Y2X3 529 aaKnown RBP13.78□□□□□ -0.2
SLC38A1-201ENST00000398637 ZPR1O75312 459 aa13.77□□□□□ -0.2
SLC38A1-201ENST00000398637 PRDM2Q13029 1718 aa13.77□□□□□ -0.2
SLC38A1-201ENST00000398637 TXNDC2Q86VQ3 553 aa13.77□□□□□ -0.2
SLC38A1-201ENST00000398637 DESP17661 470 aa13.77□□□□□ -0.2
SLC38A1-201ENST00000398637 ZNF76P36508 570 aa13.77□□□□□ -0.2
SLC38A1-201ENST00000398637 SMG6Q86US8 1419 aaKnown RBP13.77□□□□□ -0.2
SLC38A1-201ENST00000398637 NEFHP12036 1026 aa13.77□□□□□ -0.21
SLC38A1-201ENST00000398637 MPHOSPH8Q99549 860 aa13.77□□□□□ -0.21
SLC38A1-201ENST00000398637 ANKRD62A6NC57 917 aa13.77□□□□□ -0.21
SLC38A1-201ENST00000398637 ECM2O94769 699 aaPredicted RBP13.77□□□□□ -0.21
SLC38A1-201ENST00000398637 RCAN3Q9UKA8 241 aa13.77□□□□□ -0.21
SLC38A1-201ENST00000398637 TATP17735 454 aaPredicted RBP13.77□□□□□ -0.21
SLC38A1-201ENST00000398637 ATP6V1DQ9Y5K8 247 aa13.77□□□□□ -0.21
SLC38A1-201ENST00000398637 BEGAINQ9BUH8 593 aa13.76□□□□□ -0.21
SLC38A1-201ENST00000398637 BCL11BQ9C0K0 894 aaPredicted RBP13.76□□□□□ -0.21
SLC38A1-201ENST00000398637 PRDM11Q9NQV5 511 aa13.76□□□□□ -0.21
SLC38A1-201ENST00000398637 HSPA5P11021 654 aaKnown RBP13.75□□□□□ -0.21
SLC38A1-201ENST00000398637 SKIDA1Q1XH10 827 aa13.75□□□□□ -0.21
SLC38A1-201ENST00000398637 RUFY1Q96T51 708 aa13.75□□□□□ -0.21
SLC38A1-201ENST00000398637 ATP2B1P20020 1258 aa13.75□□□□□ -0.21
SLC38A1-201ENST00000398637 TTC39AQ5SRH9 613 aa13.75□□□□□ -0.21
SLC38A1-201ENST00000398637 BICD2Q8TD16 824 aa13.75□□□□□ -0.21
SLC38A1-201ENST00000398637 CEP164Q9UPV0 1460 aa13.75□□□□□ -0.21
SLC38A1-201ENST00000398637 BIN2Q9UBW5 565 aaPredicted RBP13.75□□□□□ -0.21
SLC38A1-201ENST00000398637 ERC1Q8IUD2 1116 aa13.75□□□□□ -0.21
SLC38A1-201ENST00000398637 ZNF592Q92610 1267 aa13.75□□□□□ -0.21
SLC38A1-201ENST00000398637 HMOX1P09601 288 aa13.74□□□□□ -0.21
SLC38A1-201ENST00000398637 RALBP1Q15311 655 aa13.74□□□□□ -0.21
SLC38A1-201ENST00000398637 RSPH4AQ5TD94 716 aa13.74□□□□□ -0.21
SLC38A1-201ENST00000398637 SMARCA2P51531 1590 aa13.74□□□□□ -0.21
SLC38A1-201ENST00000398637 DNAI2Q9GZS0 605 aa13.74□□□□□ -0.21
SLC38A1-201ENST00000398637 ZNF710Q8N1W2 664 aa13.73□□□□□ -0.21
SLC38A1-201ENST00000398637 DNAJC2Q99543 621 aaKnown RBP13.73□□□□□ -0.21
SLC38A1-201ENST00000398637 MPHOSPH9Q99550 1183 aa13.73□□□□□ -0.21
SLC38A1-201ENST00000398637 PSMD1Q99460 953 aa13.72□□□□□ -0.21
SLC38A1-201ENST00000398637 PODXL2Q9NZ53 605 aa13.72□□□□□ -0.21
SLC38A1-201ENST00000398637 GPS2Q13227 327 aa13.72□□□□□ -0.21
SLC38A1-201ENST00000398637 DIAPH1O60610 1272 aaKnown RBP13.72□□□□□ -0.21
SLC38A1-201ENST00000398637 ZRSR2Q15696 482 aaKnown RBP13.71□□□□□ -0.21
SLC38A1-201ENST00000398637 ERC2O15083 957 aa13.71□□□□□ -0.21
SLC38A1-201ENST00000398637 TXLNAP40222 546 aa13.71□□□□□ -0.21
SLC38A1-201ENST00000398637 TTLL5Q6EMB2 1281 aa13.71□□□□□ -0.21
SLC38A1-201ENST00000398637 ANKIB1Q9P2G1 1089 aa13.71□□□□□ -0.21
SLC38A1-201ENST00000398637 PPP4R3AQ6IN85 833 aa13.71□□□□□ -0.22
SLC38A1-201ENST00000398637 USP5P45974 858 aa13.71□□□□□ -0.22
SLC38A1-201ENST00000398637 CRACR2BQ8N4Y2 399 aaPredicted RBP13.7□□□□□ -0.22
SLC38A1-201ENST00000398637 CDR1P51861 262 aa13.7□□□□□ -0.22
SLC38A1-201ENST00000398637 ZMYND15Q9H091 742 aa13.7□□□□□ -0.22
SLC38A1-201ENST00000398637 PLEKHO1Q53GL0 409 aaPredicted RBP13.7□□□□□ -0.22
SLC38A1-201ENST00000398637 XPCQ01831 940 aaPredicted RBP13.7□□□□□ -0.22
SLC38A1-201ENST00000398637 SOGA3Q5TF21 947 aa13.69□□□□□ -0.22
SLC38A1-201ENST00000398637 VPS37CA5D8V6 355 aaPredicted RBP13.69□□□□□ -0.22
SLC38A1-201ENST00000398637 SEPT7Q16181 437 aaKnown RBP13.69□□□□□ -0.22
SLC38A1-201ENST00000398637 ANKLE2Q86XL3 938 aa13.69□□□□□ -0.22
SLC38A1-201ENST00000398637 THEMISQ8N1K5 641 aaPredicted RBP13.69□□□□□ -0.22
SLC38A1-201ENST00000398637 MYO6Q9UM54 1294 aa13.69□□□□□ -0.22
SLC38A1-201ENST00000398637 MYL6BP14649 208 aa13.68□□□□□ -0.22
SLC38A1-201ENST00000398637 RIPK4P57078 832 aa13.68□□□□□ -0.22
SLC38A1-201ENST00000398637 CCDC158Q5M9N0 1113 aa13.68□□□□□ -0.22
SLC38A1-201ENST00000398637 WWC3Q9ULE0 1092 aa13.68□□□□□ -0.22
SLC38A1-201ENST00000398637 MAGEC2Q9UBF1 373 aaPredicted RBP13.68□□□□□ -0.22
SLC38A1-201ENST00000398637 CAGE1Q8TC20 777 aa13.68□□□□□ -0.22
SLC38A1-201ENST00000398637 SPINK5Q9NQ38 1064 aaPredicted RBP13.68□□□□□ -0.22
SLC38A1-201ENST00000398637 SEPT11Q9NVA2 429 aaKnown RBP13.68□□□□□ -0.22
SLC38A1-201ENST00000398637 OLFM4Q6UX06 510 aa13.68□□□□□ -0.22
SLC38A1-201ENST00000398637 CCDC144AA2RUR9 1427 aa13.68□□□□□ -0.22
SLC38A1-201ENST00000398637 PDILTQ8N807 584 aa13.67□□□□□ -0.22
SLC38A1-201ENST00000398637 CHMP5Q9NZZ3 219 aa13.67□□□□□ -0.22
SLC38A1-201ENST00000398637 RPGRQ92834 1020 aaKnown RBP13.67□□□□□ -0.22
SLC38A1-201ENST00000398637 NACADO15069 1562 aa13.67□□□□□ -0.22
SLC38A1-201ENST00000398637 TNIP1Q15025 636 aa13.66□□□□□ -0.22
SLC38A1-201ENST00000398637 PTPRGP23470 1445 aa13.66□□□□□ -0.22
SLC38A1-201ENST00000398637 SSR1P43307 286 aaKnown RBP13.66□□□□□ -0.22
SLC38A1-201ENST00000398637 ZNF622Q969S3 477 aaKnown RBP eCLIP13.66□□□□□ -0.223e-6■■■□□ 16.8
SLC38A1-201ENST00000398637 CCDC18Q5T9S5 1454 aa13.66□□□□□ -0.22
SLC38A1-201ENST00000398637 SSBP05455 408 aaKnown RBP eCLIP13.66□□□□□ -0.22
SLC38A1-201ENST00000398637 UBTFL1P0CB47 393 aaPredicted RBP13.66□□□□□ -0.22
SLC38A1-201ENST00000398637 SPG7Q9UQ90 795 aa13.66□□□□□ -0.22
SLC38A1-201ENST00000398637 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.65□□□□□ -0.226e-7■□□□□ 10.9
SLC38A1-201ENST00000398637 NOP2P46087 812 aaKnown RBP13.65□□□□□ -0.22
SLC38A1-201ENST00000398637 BRPF1P55201 1214 aaPredicted RBP13.65□□□□□ -0.22
SLC38A1-201ENST00000398637 GRIPAP1Q4V328 841 aa13.65□□□□□ -0.22
SLC38A1-201ENST00000398637 STAC3Q96MF2 364 aa13.65□□□□□ -0.22
SLC38A1-201ENST00000398637 FAM161AQ3B820 660 aa13.65□□□□□ -0.22
SLC38A1-201ENST00000398637 PIBF1Q8WXW3 757 aa13.65□□□□□ -0.22
SLC38A1-201ENST00000398637 FSD1Q9BTV5 496 aa13.65□□□□□ -0.22
SLC38A1-201ENST00000398637 ZNF652Q9Y2D9 606 aa13.65□□□□□ -0.23
SLC38A1-201ENST00000398637 ROCK1Q13464 1354 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms