RNA–Protein interactions for RNA: ENST00000398339.5

TCF4-203, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-203ENST00000398339 POLR3AO14802 1390 aaPredicted RBP10.52□□□□□ -0.72
TCF4-203ENST00000398339 CARD14Q9BXL6 1004 aa10.52□□□□□ -0.73
TCF4-203ENST00000398339 RARSP54136 660 aaKnown RBP10.52□□□□□ -0.73
TCF4-203ENST00000398339 PDZRN3Q9UPQ7 1066 aa10.52□□□□□ -0.73
TCF4-203ENST00000398339 PCDHB15Q9Y5E8 787 aa10.52□□□□□ -0.73
TCF4-203ENST00000398339 PTPRTO14522 1441 aa10.51□□□□□ -0.73
TCF4-203ENST00000398339 ERVK-7P63135 1459 aa10.51□□□□□ -0.73
TCF4-203ENST00000398339 CEP152O94986 1710 aa10.51□□□□□ -0.73
TCF4-203ENST00000398339 CLTCL1P53675 1640 aa10.5□□□□□ -0.73
TCF4-203ENST00000398339 FSD2A1L4K1 749 aa10.5□□□□□ -0.73
TCF4-203ENST00000398339 RLBP1P12271 317 aa10.5□□□□□ -0.73
TCF4-203ENST00000398339 KIAA1210Q9ULL0 1709 aa10.49□□□□□ -0.73
TCF4-203ENST00000398339 GOLGA6L3A6NEY3 463 aa10.49□□□□□ -0.73
TCF4-203ENST00000398339 XRCC6P12956 609 aaKnown RBP eCLIP10.49□□□□□ -0.73
TCF4-203ENST00000398339 RWDD1Q9H446 243 aaPredicted RBP10.49□□□□□ -0.73
TCF4-203ENST00000398339 TNNQ9UQP3 1299 aa10.49□□□□□ -0.73
TCF4-203ENST00000398339 MCM4P33991 863 aa10.49□□□□□ -0.73
TCF4-203ENST00000398339 OSCARQ8IYS5 282 aa10.48□□□□□ -0.73
TCF4-203ENST00000398339 RUNDC1Q96C34 613 aa10.48□□□□□ -0.73
TCF4-203ENST00000398339 CHMP4BQ9H444 224 aaKnown RBP10.48□□□□□ -0.73
TCF4-203ENST00000398339 IQSEC2Q5JU85 1478 aa10.48□□□□□ -0.73
TCF4-203ENST00000398339 C14orf37Q86TY3 774 aa10.47□□□□□ -0.73
TCF4-203ENST00000398339 WDR63Q8IWG1 891 aa10.47□□□□□ -0.73
TCF4-203ENST00000398339 RRP7AQ9Y3A4 280 aaKnown RBP10.47□□□□□ -0.73
TCF4-203ENST00000398339 PLCH2O75038 1416 aa10.47□□□□□ -0.73
TCF4-203ENST00000398339 NEUROD2Q15784 382 aa10.47□□□□□ -0.73
TCF4-203ENST00000398339 TCP11L2Q8N4U5 519 aa10.47□□□□□ -0.73
TCF4-203ENST00000398339 SHPRHQ149N8 1683 aa10.47□□□□□ -0.73
TCF4-203ENST00000398339 TRAPPC8Q9Y2L5 1435 aa10.46□□□□□ -0.73
TCF4-203ENST00000398339 CFAP70Q5T0N1 1121 aa10.46□□□□□ -0.73
TCF4-203ENST00000398339 CHMP5Q9NZZ3 219 aa10.46□□□□□ -0.73
TCF4-203ENST00000398339 RTEL1-TNFRSF6BF6WH68 1400 aa10.46□□□□□ -0.73
TCF4-203ENST00000398339 EFCAB2Q5VUJ9 269 aa10.46□□□□□ -0.74
TCF4-203ENST00000398339 SPRYD3Q8NCJ5 442 aa10.46□□□□□ -0.74
TCF4-203ENST00000398339 BCL2L13Q9BXK5 485 aa10.46□□□□□ -0.74
TCF4-203ENST00000398339 ABCC1P33527 1531 aa10.46□□□□□ -0.74
TCF4-203ENST00000398339 KANK1Q14678 1352 aa10.45□□□□□ -0.74
TCF4-203ENST00000398339 RRP9O43818 475 aaKnown RBP10.45□□□□□ -0.74
TCF4-203ENST00000398339 BBXQ8WY36 941 aaPredicted RBP10.45□□□□□ -0.74
TCF4-203ENST00000398339 NEURL4Q96JN8 1562 aa10.45□□□□□ -0.74
TCF4-203ENST00000398339 MYOM2P54296 1465 aa10.45□□□□□ -0.74
TCF4-203ENST00000398339 CLCN1P35523 988 aa10.45□□□□□ -0.74
TCF4-203ENST00000398339 MVPQ14764 893 aaKnown RBP10.45□□□□□ -0.74
TCF4-203ENST00000398339 CCDC27Q2M243 656 aa10.45□□□□□ -0.74
TCF4-203ENST00000398339 MORC1Q86VD1 984 aa10.45□□□□□ -0.74
TCF4-203ENST00000398339 PANK2Q9BZ23 570 aa10.45□□□□□ -0.74
TCF4-203ENST00000398339 C22orf23Q9BZE7 217 aa10.45□□□□□ -0.74
TCF4-203ENST00000398339 GZF1Q9H116 711 aaPredicted RBP10.45□□□□□ -0.74
TCF4-203ENST00000398339 ABCA6Q8N139 1617 aa10.44□□□□□ -0.74
TCF4-203ENST00000398339 TRAK2O60296 914 aa10.44□□□□□ -0.74
TCF4-203ENST00000398339 SHROOM2Q13796 1616 aa10.44□□□□□ -0.74
TCF4-203ENST00000398339 MAP3K4Q9Y6R4 1608 aa10.44□□□□□ -0.74
TCF4-203ENST00000398339 HSP90AA2PQ14568 343 aaPredicted RBP10.44□□□□□ -0.74
TCF4-203ENST00000398339 IPO4Q8TEX9 1081 aaKnown RBP10.44□□□□□ -0.74
TCF4-203ENST00000398339 NSD3Q9BZ95 1437 aa10.44□□□□□ -0.74
TCF4-203ENST00000398339 TET3O43151 1660 aa10.44□□□□□ -0.74
TCF4-203ENST00000398339 SBNO2Q9Y2G9 1366 aa10.44□□□□□ -0.74
TCF4-203ENST00000398339 SPAG9O60271 1321 aaKnown RBP10.43□□□□□ -0.74
TCF4-203ENST00000398339 ADGRF5Q8IZF2 1346 aa10.43□□□□□ -0.74
TCF4-203ENST00000398339 DEPDC5O75140 1603 aa10.43□□□□□ -0.74
TCF4-203ENST00000398339 MRE11P49959 708 aa10.43□□□□□ -0.74
TCF4-203ENST00000398339 MFAP1P55081 439 aaKnown RBP10.43□□□□□ -0.74
TCF4-203ENST00000398339 PNNQ9H307 717 aaKnown RBP10.43□□□□□ -0.74
TCF4-203ENST00000398339 MYH16Q9H6N6 1097 aa10.43□□□□□ -0.74
TCF4-203ENST00000398339 MYO3AQ8NEV4 1616 aa10.42□□□□□ -0.74
TCF4-203ENST00000398339 GTF2E1P29083 439 aaPredicted RBP10.42□□□□□ -0.74
TCF4-203ENST00000398339 ZKSCAN2Q63HK3 967 aa10.42□□□□□ -0.74
TCF4-203ENST00000398339 TNNT2P45379 298 aaPredicted RBP10.42□□□□□ -0.74
TCF4-203ENST00000398339 ZFYVE16Q7Z3T8 1539 aa10.42□□□□□ -0.74
TCF4-203ENST00000398339 ZNF518AQ6AHZ1 1483 aa10.41□□□□□ -0.74
TCF4-203ENST00000398339 DZIP1LQ8IYY4 767 aaKnown RBP10.41□□□□□ -0.74
TCF4-203ENST00000398339 ZNF692Q9BU19 519 aaPredicted RBP10.41□□□□□ -0.74
TCF4-203ENST00000398339 VWDEQ8N2E2 1590 aa10.41□□□□□ -0.74
TCF4-203ENST00000398339 DDX11L8A8MPP1 907 aa10.41□□□□□ -0.74
TCF4-203ENST00000398339 CNKSR2Q8WXI2 1034 aa10.41□□□□□ -0.74
TCF4-203ENST00000398339 HDAC1Q13547 482 aaPredicted RBP10.4□□□□□ -0.74
TCF4-203ENST00000398339 HSCBQ8IWL3 235 aa10.4□□□□□ -0.74
TCF4-203ENST00000398339 FTSJ3Q8IY81 847 aaKnown RBP10.4□□□□□ -0.74
TCF4-203ENST00000398339 PRDM4Q9UKN5 801 aa10.4□□□□□ -0.74
TCF4-203ENST00000398339 CFAP53Q96M91 514 aa10.4□□□□□ -0.74
TCF4-203ENST00000398339 ISY1Q9ULR0 285 aaKnown RBP10.4□□□□□ -0.74
TCF4-203ENST00000398339 NCOA3Q9Y6Q9 1424 aa10.39□□□□□ -0.75
TCF4-203ENST00000398339 CT47B1P0C2W7 299 aaPredicted RBP10.39□□□□□ -0.75
TCF4-203ENST00000398339 MTHFSP49914 203 aa10.39□□□□□ -0.75
TCF4-203ENST00000398339 AFAP1Q8N556 730 aa10.39□□□□□ -0.75
TCF4-203ENST00000398339 GRPEL1Q9HAV7 217 aa10.39□□□□□ -0.75
TCF4-203ENST00000398339 NRXN1Q9ULB1 1477 aa10.39□□□□□ -0.75
TCF4-203ENST00000398339 UGGT1Q9NYU2 1555 aa10.39□□□□□ -0.75
TCF4-203ENST00000398339 DDIT3P35638 169 aa10.39□□□□□ -0.75
TCF4-203ENST00000398339 ZFP91Q96JP5 570 aaPredicted RBP10.39□□□□□ -0.75
TCF4-203ENST00000398339 SLC12A5Q9H2X9 1139 aa10.39□□□□□ -0.75
TCF4-203ENST00000398339 USP32Q8NFA0 1604 aa10.38□□□□□ -0.75
TCF4-203ENST00000398339 SMC5Q8IY18 1101 aa10.37□□□□□ -0.75
TCF4-203ENST00000398339 IFT172Q9UG01 1749 aa10.37□□□□□ -0.75
TCF4-203ENST00000398339 ADGRL1O94910 1474 aa10.37□□□□□ -0.75
TCF4-203ENST00000398339 TRIM27P14373 513 aa10.37□□□□□ -0.75
TCF4-203ENST00000398339 SNX21Q969T3 373 aa10.37□□□□□ -0.75
TCF4-203ENST00000398339 SMC4Q9NTJ3 1288 aa10.37□□□□□ -0.75
TCF4-203ENST00000398339 DDX19BQ9UMR2 479 aa10.37□□□□□ -0.75
TCF4-203ENST00000398339 ADGRB2O60241 1585 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms