RNA–Protein interactions for RNA: ENST00000398229.7

PDE9A-210, Transcript of phosphodiesterase 9A, humanhuman

TSL 1 (best) BASIC

Gene PDE9A, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE9A-210ENST00000398229 PIBF1Q8WXW3 757 aa13.75□□□□□ -0.21
PDE9A-210ENST00000398229 TNPO1Q92973 898 aaKnown RBP13.75□□□□□ -0.21
PDE9A-210ENST00000398229 NCAPGQ9BPX3 1015 aa13.75□□□□□ -0.21
PDE9A-210ENST00000398229 BCL2L12Q9HB09 334 aa13.75□□□□□ -0.21
PDE9A-210ENST00000398229 GAPVD1Q14C86 1478 aa13.75□□□□□ -0.21
PDE9A-210ENST00000398229 RPRD2Q5VT52 1461 aaKnown RBP13.75□□□□□ -0.21
PDE9A-210ENST00000398229 CTIFO43310 598 aaKnown RBP13.74□□□□□ -0.21
PDE9A-210ENST00000398229 PLIN1O60240 522 aa13.73□□□□□ -0.21
PDE9A-210ENST00000398229 SEC24BO95487 1268 aa13.73□□□□□ -0.21
PDE9A-210ENST00000398229 NLRP13Q86W25 1043 aa13.73□□□□□ -0.21
PDE9A-210ENST00000398229 SPTLC3Q9NUV7 552 aa13.73□□□□□ -0.21
PDE9A-210ENST00000398229 FEZ2Q9UHY8 353 aaPredicted RBP13.73□□□□□ -0.21
PDE9A-210ENST00000398229 MORC2Q9Y6X9 1032 aaPredicted RBP13.73□□□□□ -0.21
PDE9A-210ENST00000398229 FGD6Q6ZV73 1430 aa13.73□□□□□ -0.21
PDE9A-210ENST00000398229 ANKRD30AQ9BXX3 1397 aa13.73□□□□□ -0.21
PDE9A-210ENST00000398229 CGNL1Q0VF96 1302 aa13.73□□□□□ -0.21
PDE9A-210ENST00000398229 TARBP1Q13395 1621 aaKnown RBP13.72□□□□□ -0.21
PDE9A-210ENST00000398229 LMOD3Q0VAK6 560 aa13.72□□□□□ -0.21
PDE9A-210ENST00000398229 BCORL1Q5H9F3 1711 aa13.72□□□□□ -0.21
PDE9A-210ENST00000398229 BRPF1P55201 1214 aaPredicted RBP13.72□□□□□ -0.21
PDE9A-210ENST00000398229 MAPK8IP2Q13387 824 aaPredicted RBP13.72□□□□□ -0.21
PDE9A-210ENST00000398229 FKBP5Q13451 457 aaPredicted RBP13.72□□□□□ -0.21
PDE9A-210ENST00000398229 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.72□□□□□ -0.21
PDE9A-210ENST00000398229 AEBP1Q8IUX7 1158 aa13.72□□□□□ -0.21
PDE9A-210ENST00000398229 CHAF1AQ13111 956 aaPredicted RBP13.71□□□□□ -0.21
PDE9A-210ENST00000398229 HSP90AB3PQ58FF7 597 aa13.71□□□□□ -0.21
PDE9A-210ENST00000398229 DDX41Q9UJV9 622 aaKnown RBP13.71□□□□□ -0.21
PDE9A-210ENST00000398229 KIF14Q15058 1648 aa13.71□□□□□ -0.22
PDE9A-210ENST00000398229 KDM5CP41229 1560 aa13.7□□□□□ -0.22
PDE9A-210ENST00000398229 NGEFQ8N5V2 710 aa13.7□□□□□ -0.22
PDE9A-210ENST00000398229 SMC4Q9NTJ3 1288 aa13.7□□□□□ -0.22
PDE9A-210ENST00000398229 SHROOM2Q13796 1616 aa13.7□□□□□ -0.22
PDE9A-210ENST00000398229 TNNT3P45378 269 aaPredicted RBP13.69□□□□□ -0.22
PDE9A-210ENST00000398229 CEP83Q9Y592 693 aa13.69□□□□□ -0.22
PDE9A-210ENST00000398229 SPDYE4A6NLX3 237 aa13.69□□□□□ -0.22
PDE9A-210ENST00000398229 PATL2C9JE40 543 aaKnown RBP13.69□□□□□ -0.22
PDE9A-210ENST00000398229 NOP2P46087 812 aaKnown RBP13.69□□□□□ -0.22
PDE9A-210ENST00000398229 SATB1Q01826 763 aa13.69□□□□□ -0.22
PDE9A-210ENST00000398229 C20orf194Q5TEA3 1177 aa13.69□□□□□ -0.22
PDE9A-210ENST00000398229 EGFL6Q8IUX8 553 aa13.69□□□□□ -0.22
PDE9A-210ENST00000398229 MTUS2Q5JR59 1369 aa13.69□□□□□ -0.22
PDE9A-210ENST00000398229 PARD3Q8TEW0 1356 aa13.69□□□□□ -0.22
PDE9A-210ENST00000398229 DENND4BO75064 1496 aaPredicted RBP13.69□□□□□ -0.22
PDE9A-210ENST00000398229 FHOD3Q2V2M9 1422 aa13.68□□□□□ -0.22
PDE9A-210ENST00000398229 SNAPC4Q5SXM2 1469 aa13.68□□□□□ -0.22
PDE9A-210ENST00000398229 KIF1CO43896 1103 aaKnown RBP13.68□□□□□ -0.22
PDE9A-210ENST00000398229 CLSTN1O94985 981 aa13.68□□□□□ -0.22
PDE9A-210ENST00000398229 U2AF2P26368 475 aaKnown RBP eCLIP13.68□□□□□ -0.22
PDE9A-210ENST00000398229 SLC26A8Q96RN1 970 aa13.68□□□□□ -0.22
PDE9A-210ENST00000398229 EPRSP07814 1512 aaKnown RBP13.68□□□□□ -0.22
PDE9A-210ENST00000398229 GTF2A1P52655 376 aaPredicted RBP13.67□□□□□ -0.22
PDE9A-210ENST00000398229 CERS3Q8IU89 383 aa13.67□□□□□ -0.22
PDE9A-210ENST00000398229 KRT222Q8N1A0 295 aa13.67□□□□□ -0.22
PDE9A-210ENST00000398229 BANK1Q8NDB2 785 aa13.67□□□□□ -0.22
PDE9A-210ENST00000398229 CTNNA3Q9UI47 895 aa13.67□□□□□ -0.22
PDE9A-210ENST00000398229 PBRM1Q86U86 1689 aa13.67□□□□□ -0.22
PDE9A-210ENST00000398229 CCDC172P0C7W6 258 aa13.66□□□□□ -0.22
PDE9A-210ENST00000398229 NOLC1Q14978 699 aaKnown RBP eCLIP13.66□□□□□ -0.22
PDE9A-210ENST00000398229 ICE2Q659A1 982 aa13.66□□□□□ -0.22
PDE9A-210ENST00000398229 L3MBTL2Q969R5 705 aa13.66□□□□□ -0.22
PDE9A-210ENST00000398229 C22orf23Q9BZE7 217 aa13.66□□□□□ -0.22
PDE9A-210ENST00000398229 DDX49Q9Y6V7 483 aaKnown RBP13.66□□□□□ -0.22
PDE9A-210ENST00000398229 MBD5Q9P267 1494 aa13.66□□□□□ -0.22
PDE9A-210ENST00000398229 HMGB1P09429 215 aaKnown RBP13.66□□□□□ -0.22
PDE9A-210ENST00000398229 MUM1L1Q5H9M0 696 aa13.66□□□□□ -0.22
PDE9A-210ENST00000398229 RASSF4Q9H2L5 321 aa13.66□□□□□ -0.22
PDE9A-210ENST00000398229 RAI14Q9P0K7 980 aa13.66□□□□□ -0.22
PDE9A-210ENST00000398229 PLXNC1O60486 1568 aa13.66□□□□□ -0.22
PDE9A-210ENST00000398229 ZSCAN23Q3MJ62 389 aa13.65□□□□□ -0.22
PDE9A-210ENST00000398229 MNS1Q8NEH6 495 aa13.65□□□□□ -0.22
PDE9A-210ENST00000398229 PMFBP1Q8TBY8 1022 aa13.65□□□□□ -0.22
PDE9A-210ENST00000398229 CDCA7LQ96GN5 454 aa13.65□□□□□ -0.22
PDE9A-210ENST00000398229 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.65□□□□□ -0.22
PDE9A-210ENST00000398229 REC8O95072 547 aa13.64□□□□□ -0.23
PDE9A-210ENST00000398229 GUCY2CP25092 1073 aa13.64□□□□□ -0.23
PDE9A-210ENST00000398229 PDE3AQ14432 1141 aa13.64□□□□□ -0.23
PDE9A-210ENST00000398229 PLCD4Q9BRC7 762 aa13.64□□□□□ -0.23
PDE9A-210ENST00000398229 RBSNQ9H1K0 784 aa13.64□□□□□ -0.23
PDE9A-210ENST00000398229 MRC2Q9UBG0 1479 aa13.64□□□□□ -0.23
PDE9A-210ENST00000398229 KIF16BQ96L93 1317 aa13.64□□□□□ -0.23
PDE9A-210ENST00000398229 PLEKHH1Q9ULM0 1364 aa13.64□□□□□ -0.23
PDE9A-210ENST00000398229 GOLGA6L6A8MZA4 724 aa13.63□□□□□ -0.23
PDE9A-210ENST00000398229 TPM3P06753 285 aa13.63□□□□□ -0.23
PDE9A-210ENST00000398229 SIRT1Q96EB6 747 aa13.63□□□□□ -0.23
PDE9A-210ENST00000398229 RBM28Q9NW13 759 aaKnown RBP13.63□□□□□ -0.23
PDE9A-210ENST00000398229 FAM53CQ9NYF3 392 aa13.63□□□□□ -0.23
PDE9A-210ENST00000398229 CCDC9Q9Y3X0 531 aaKnown RBP13.63□□□□□ -0.23
PDE9A-210ENST00000398229 GRIN2BQ13224 1484 aa13.63□□□□□ -0.23
PDE9A-210ENST00000398229 LRSAM1Q6UWE0 723 aa13.63□□□□□ -0.23
PDE9A-210ENST00000398229 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.63□□□□□ -0.23
PDE9A-210ENST00000398229 TDRD9Q8NDG6 1382 aaKnown RBP13.62□□□□□ -0.23
PDE9A-210ENST00000398229 CAMSAP2Q08AD1 1489 aa13.62□□□□□ -0.23
PDE9A-210ENST00000398229 LOC102724159A0A0B4J2E5 919 aa13.62□□□□□ -0.23
PDE9A-210ENST00000398229 DHX16O60231 1041 aaKnown RBP13.62□□□□□ -0.23
PDE9A-210ENST00000398229 PWP2Q15269 919 aaKnown RBP13.62□□□□□ -0.23
PDE9A-210ENST00000398229 AMER1Q5JTC6 1135 aaPredicted RBP13.62□□□□□ -0.23
PDE9A-210ENST00000398229 USP47Q96K76 1375 aa13.62□□□□□ -0.23
PDE9A-210ENST00000398229 ADAMTS12P58397 1594 aa13.61□□□□□ -0.23
PDE9A-210ENST00000398229 CYP2C19P33261 490 aa13.61□□□□□ -0.23
PDE9A-210ENST00000398229 UVSSAQ2YD98 709 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms