RNA–Protein interactions for RNA: ENST00000397968.3

CDH7-202, Transcript of cadherin 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH7, Length 12,231 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH7-202ENST00000397968 RRP12Q5JTH9 1297 aaKnown RBP11.98□□□□□ -0.49
CDH7-202ENST00000397968 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.98□□□□□ -0.49
CDH7-202ENST00000397968 APAF1O14727 1248 aa11.97□□□□□ -0.49
CDH7-202ENST00000397968 TXLNBQ8N3L3 684 aa11.97□□□□□ -0.49
CDH7-202ENST00000397968 TAF3Q5VWG9 929 aa11.97□□□□□ -0.49
CDH7-202ENST00000397968 EFCAB5A4FU69 1503 aa11.97□□□□□ -0.49
CDH7-202ENST00000397968 TRAK2O60296 914 aa11.97□□□□□ -0.49
CDH7-202ENST00000397968 RIPK4P57078 832 aa11.97□□□□□ -0.49
CDH7-202ENST00000397968 MLECQ14165 292 aa11.96□□□□□ -0.49
CDH7-202ENST00000397968 DHX16O60231 1041 aaKnown RBP11.96□□□□□ -0.49
CDH7-202ENST00000397968 G3BP1Q13283 466 aaKnown RBP eCLIP11.96□□□□□ -0.49
CDH7-202ENST00000397968 PRDM2Q13029 1718 aa11.96□□□□□ -0.49
CDH7-202ENST00000397968 TRAK1Q9UPV9 953 aa11.96□□□□□ -0.5
CDH7-202ENST00000397968 PCMTD1Q96MG8 357 aaPredicted RBP11.96□□□□□ -0.5
CDH7-202ENST00000397968 BCL2L13Q9BXK5 485 aa11.96□□□□□ -0.5
CDH7-202ENST00000397968 ATAD2BQ9ULI0 1458 aa11.96□□□□□ -0.5
CDH7-202ENST00000397968 SMARCE1Q969G3 411 aa11.95□□□□□ -0.5
CDH7-202ENST00000397968 RRP7AQ9Y3A4 280 aaKnown RBP11.95□□□□□ -0.5
CDH7-202ENST00000397968 SLC4A3P48751 1232 aa11.95□□□□□ -0.5
CDH7-202ENST00000397968 CNTROBQ8N137 903 aa11.95□□□□□ -0.5
CDH7-202ENST00000397968 ZNF428Q96B54 188 aa11.95□□□□□ -0.5
CDH7-202ENST00000397968 GTF2E1P29083 439 aaPredicted RBP11.95□□□□□ -0.5
CDH7-202ENST00000397968 FOXD4L5Q5VV16 416 aaPredicted RBP11.95□□□□□ -0.5
CDH7-202ENST00000397968 CCDC191Q8NCU4 936 aa11.95□□□□□ -0.5
CDH7-202ENST00000397968 FOXD4L4Q8WXT5 416 aaPredicted RBP11.95□□□□□ -0.5
CDH7-202ENST00000397968 PLEKHH2Q8IVE3 1493 aa11.95□□□□□ -0.5
CDH7-202ENST00000397968 ANKRD1Q15327 319 aa11.94□□□□□ -0.5
CDH7-202ENST00000397968 IL27Q8NEV9 243 aa11.94□□□□□ -0.5
CDH7-202ENST00000397968 CASKIN1Q8WXD9 1431 aa11.94□□□□□ -0.5
CDH7-202ENST00000397968 RALYLQ86SE5 291 aaKnown RBP11.94□□□□□ -0.5
CDH7-202ENST00000397968 TCEAL9Q9UHQ7 104 aa11.94□□□□□ -0.5
CDH7-202ENST00000397968 HFM1A2PYH4 1435 aa11.94□□□□□ -0.5
CDH7-202ENST00000397968 KINO60870 393 aaKnown RBP11.93□□□□□ -0.5
CDH7-202ENST00000397968 GNAI3P08754 354 aa11.93□□□□□ -0.5
CDH7-202ENST00000397968 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.93□□□□□ -0.5
CDH7-202ENST00000397968 FKBP5Q13451 457 aaPredicted RBP11.93□□□□□ -0.5
CDH7-202ENST00000397968 LEKR1Q6ZMV7 388 aa11.93□□□□□ -0.5
CDH7-202ENST00000397968 VPS37CA5D8V6 355 aaPredicted RBP11.93□□□□□ -0.5
CDH7-202ENST00000397968 CIZ1Q9ULV3 898 aaPredicted RBP11.93□□□□□ -0.5
CDH7-202ENST00000397968 VPS53Q5VIR6 699 aa11.93□□□□□ -0.5
CDH7-202ENST00000397968 JMYQ8N9B5 988 aa11.92□□□□□ -0.5
CDH7-202ENST00000397968 SUPT6HQ7KZ85 1726 aaKnown RBP11.92□□□□□ -0.5
CDH7-202ENST00000397968 LUC7LQ9NQ29 371 aaKnown RBP11.92□□□□□ -0.5
CDH7-202ENST00000397968 EHBP1L1Q8N3D4 1523 aa11.92□□□□□ -0.5
CDH7-202ENST00000397968 TSPY26PQ9H489 355 aa11.92□□□□□ -0.5
CDH7-202ENST00000397968 RRP9O43818 475 aaKnown RBP11.92□□□□□ -0.5
CDH7-202ENST00000397968 AEBP1Q8IUX7 1158 aa11.92□□□□□ -0.5
CDH7-202ENST00000397968 JPH4Q96JJ6 628 aa11.92□□□□□ -0.5
CDH7-202ENST00000397968 ERC1Q8IUD2 1116 aa11.92□□□□□ -0.5
CDH7-202ENST00000397968 FANCD2Q9BXW9 1451 aa11.92□□□□□ -0.5
CDH7-202ENST00000397968 PDCL2Q8N4E4 241 aa11.91□□□□□ -0.5
CDH7-202ENST00000397968 ANKRD50Q9ULJ7 1429 aa11.91□□□□□ -0.5
CDH7-202ENST00000397968 CCDC192P0DO97 292 aa11.91□□□□□ -0.5
CDH7-202ENST00000397968 SDF4Q9BRK5 362 aa11.91□□□□□ -0.5
CDH7-202ENST00000397968 H0YHG0 523 aa11.91□□□□□ -0.5
CDH7-202ENST00000397968 DACH1Q9UI36 760 aa11.91□□□□□ -0.5
CDH7-202ENST00000397968 SART3Q15020 963 aaKnown RBP11.91□□□□□ -0.5
CDH7-202ENST00000397968 ZNF396Q96N95 335 aaPredicted RBP11.91□□□□□ -0.5
CDH7-202ENST00000397968 SMG6Q86US8 1419 aaKnown RBP11.91□□□□□ -0.5
CDH7-202ENST00000397968 FILIP1LQ4L180 1135 aa11.91□□□□□ -0.5
CDH7-202ENST00000397968 IQCEQ6IPM2 695 aa11.9□□□□□ -0.5
CDH7-202ENST00000397968 TRIM5Q9C035 493 aa11.89□□□□□ -0.51
CDH7-202ENST00000397968 APPP05067 770 aa11.89□□□□□ -0.51
CDH7-202ENST00000397968 USP8P40818 1118 aa11.89□□□□□ -0.51
CDH7-202ENST00000397968 GOLGA6L7A0A1B0GV03 622 aa11.89□□□□□ -0.51
CDH7-202ENST00000397968 GAPVD1Q14C86 1478 aa11.89□□□□□ -0.51
CDH7-202ENST00000397968 ELL2O00472 640 aaPredicted RBP11.89□□□□□ -0.51
CDH7-202ENST00000397968 NFXL1Q6ZNB6 911 aa11.89□□□□□ -0.51
CDH7-202ENST00000397968 CLASRPQ8N2M8 674 aaKnown RBP11.89□□□□□ -0.51
CDH7-202ENST00000397968 NCOA2Q15596 1464 aa11.89□□□□□ -0.51
CDH7-202ENST00000397968 EIF3JO75822 258 aaKnown RBP11.89□□□□□ -0.51
CDH7-202ENST00000397968 SRCIN1Q9C0H9 1055 aa11.89□□□□□ -0.51
CDH7-202ENST00000397968 ERLIN1O75477 346 aa11.89□□□□□ -0.51
CDH7-202ENST00000397968 R3HCC1Q9Y3T6 440 aaKnown RBP11.89□□□□□ -0.51
CDH7-202ENST00000397968 WDR33Q9C0J8 1336 aaKnown RBP11.89□□□□□ -0.51
CDH7-202ENST00000397968 FOXD4L6Q3SYB3 417 aaPredicted RBP11.88□□□□□ -0.51
CDH7-202ENST00000397968 FOXD4L3Q6VB84 417 aaPredicted RBP11.88□□□□□ -0.51
CDH7-202ENST00000397968 PRM3Q9NNZ6 103 aa11.88□□□□□ -0.51
CDH7-202ENST00000397968 EPS15P42566 896 aa11.88□□□□□ -0.51
CDH7-202ENST00000397968 TRIM34Q9BYJ4 488 aa11.88□□□□□ -0.51
CDH7-202ENST00000397968 UBTFL1P0CB47 393 aaPredicted RBP11.88□□□□□ -0.51
CDH7-202ENST00000397968 PTPRGP23470 1445 aa11.88□□□□□ -0.51
CDH7-202ENST00000397968 TXLNAP40222 546 aa11.88□□□□□ -0.51
CDH7-202ENST00000397968 LNPKQ9C0E8 428 aa11.88□□□□□ -0.51
CDH7-202ENST00000397968 CCDC30Q5VVM6 783 aa11.88□□□□□ -0.51
CDH7-202ENST00000397968 CAGE1Q8TC20 777 aa11.88□□□□□ -0.51
CDH7-202ENST00000397968 VPS37DQ86XT2 251 aa11.88□□□□□ -0.51
CDH7-202ENST00000397968 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.88□□□□□ -0.51
CDH7-202ENST00000397968 ODF2Q5BJF6 829 aa11.87□□□□□ -0.51
CDH7-202ENST00000397968 BACH2Q9BYV9 841 aa11.87□□□□□ -0.51
CDH7-202ENST00000397968 NCBP3Q53F19 620 aaKnown RBP11.87□□□□□ -0.51
CDH7-202ENST00000397968 KIF2AO00139 706 aaPredicted RBP11.87□□□□□ -0.51
CDH7-202ENST00000397968 CT47A1Q5JQC4 288 aaPredicted RBP11.87□□□□□ -0.51
CDH7-202ENST00000397968 HECW1Q76N89 1606 aa11.86□□□□□ -0.51
CDH7-202ENST00000397968 POLA1P09884 1462 aaPredicted RBP11.86□□□□□ -0.51
CDH7-202ENST00000397968 GOLGA6L10A6NI86 522 aa11.86□□□□□ -0.51
CDH7-202ENST00000397968 CFAP45Q9UL16 551 aa11.86□□□□□ -0.51
CDH7-202ENST00000397968 OFD1O75665 1012 aa11.86□□□□□ -0.51
CDH7-202ENST00000397968 CCDC43Q96MW1 224 aaKnown RBP11.86□□□□□ -0.51
CDH7-202ENST00000397968 ERLIN2O94905 339 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms