RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 WAPLQ7Z5K2 1190 aa23.3■■□□□ 1.32
AP1S3-202ENST00000396653 POGKQ9P215 609 aa23.29■■□□□ 1.32
AP1S3-202ENST00000396653 RBM33Q96EV2 1170 aaKnown RBP23.28■■□□□ 1.32
AP1S3-202ENST00000396653 C19orf44Q9H6X5 657 aa23.28■■□□□ 1.32
AP1S3-202ENST00000396653 C14orf37Q86TY3 774 aa23.27■■□□□ 1.32
AP1S3-202ENST00000396653 FMN2Q9NZ56 1722 aa23.27■■□□□ 1.32
AP1S3-202ENST00000396653 CENPJQ9HC77 1338 aaPredicted RBP23.27■■□□□ 1.32
AP1S3-202ENST00000396653 ZEB1P37275 1124 aaPredicted RBP23.25■■□□□ 1.31
AP1S3-202ENST00000396653 USP47Q96K76 1375 aa23.25■■□□□ 1.31
AP1S3-202ENST00000396653 SBNO2Q9Y2G9 1366 aa23.25■■□□□ 1.31
AP1S3-202ENST00000396653 CADPS2Q86UW7 1296 aa23.22■■□□□ 1.31
AP1S3-202ENST00000396653 SAFB2Q14151 953 aaKnown RBP eCLIP23.21■■□□□ 1.31
AP1S3-202ENST00000396653 ATF3P18847 181 aa23.2■■□□□ 1.3
AP1S3-202ENST00000396653 MST1RQ04912 1400 aa23.19■■□□□ 1.3
AP1S3-202ENST00000396653 MINK1Q8N4C8 1332 aaPredicted RBP23.18■■□□□ 1.3
AP1S3-202ENST00000396653 TOM1O60784 492 aa23.18■■□□□ 1.3
AP1S3-202ENST00000396653 TULP4Q9NRJ4 1543 aa23.17■■□□□ 1.3
AP1S3-202ENST00000396653 ITSN1Q15811 1721 aa23.16■■□□□ 1.3
AP1S3-202ENST00000396653 ANKARQ7Z5J8 1434 aa23.16■■□□□ 1.3
AP1S3-202ENST00000396653 USP32Q8NFA0 1604 aa23.15■■□□□ 1.3
AP1S3-202ENST00000396653 UBAP1LF5GYI3 381 aa23.15■■□□□ 1.3
AP1S3-202ENST00000396653 WASLO00401 505 aaPredicted RBP23.14■■□□□ 1.29
AP1S3-202ENST00000396653 SLC24A1O60721 1099 aa23.14■■□□□ 1.29
AP1S3-202ENST00000396653 RGPD8O14715 1765 aaPredicted RBP23.14■■□□□ 1.29
AP1S3-202ENST00000396653 C1orf167Q5SNV9 1468 aa23.13■■□□□ 1.29
AP1S3-202ENST00000396653 ST20-MTHFSA0A0A6YYL1 179 aa23.13■■□□□ 1.29
AP1S3-202ENST00000396653 EIF4G2P78344 907 aaKnown RBP eCLIP23.13■■□□□ 1.29
AP1S3-202ENST00000396653 HIRIP3Q9BW71 556 aaPredicted RBP23.13■■□□□ 1.29
AP1S3-202ENST00000396653 TOPAZ1Q8N9V7 1692 aa23.13■■□□□ 1.29
AP1S3-202ENST00000396653 ROBO1Q9Y6N7 1651 aa23.13■■□□□ 1.29
AP1S3-202ENST00000396653 TESK2Q96S53 571 aa23.11■■□□□ 1.29
AP1S3-202ENST00000396653 SLAIN2Q9P270 581 aa23.11■■□□□ 1.29
AP1S3-202ENST00000396653 KIF1AQ12756 1690 aa23.11■■□□□ 1.29
AP1S3-202ENST00000396653 ATP7BP35670 1465 aa23.11■■□□□ 1.29
AP1S3-202ENST00000396653 EVC2Q86UK5 1308 aa23.1■■□□□ 1.29
AP1S3-202ENST00000396653 FBXO41Q8TF61 875 aa23.07■■□□□ 1.28
AP1S3-202ENST00000396653 CDK19Q9BWU1 502 aa23.07■■□□□ 1.28
AP1S3-202ENST00000396653 NHSL1Q5SYE7 1610 aa23.07■■□□□ 1.28
AP1S3-202ENST00000396653 HSPA5P11021 654 aaKnown RBP23.06■■□□□ 1.28
AP1S3-202ENST00000396653 PUS7Q96PZ0 661 aaKnown RBP23.04■■□□□ 1.28
AP1S3-202ENST00000396653 PRR36Q9H6K5 1346 aa23.04■■□□□ 1.28
AP1S3-202ENST00000396653 AHDC1Q5TGY3 1603 aaPredicted RBP23.04■■□□□ 1.28
AP1S3-202ENST00000396653 ATAD2Q6PL18 1390 aa23.02■■□□□ 1.28
AP1S3-202ENST00000396653 SRPK2P78362 688 aaKnown RBP23.02■■□□□ 1.28
AP1S3-202ENST00000396653 TMF1P82094 1093 aa23.02■■□□□ 1.28
AP1S3-202ENST00000396653 BRINP3Q76B58 766 aa23.02■■□□□ 1.28
AP1S3-202ENST00000396653 NUTM2FA1L443 756 aa23.01■■□□□ 1.27
AP1S3-202ENST00000396653 PIP4K2BP78356 416 aa23.01■■□□□ 1.27
AP1S3-202ENST00000396653 NUDT16Q96DE0 195 aaKnown RBP23.01■■□□□ 1.27
AP1S3-202ENST00000396653 DISP3Q9P2K9 1392 aa23■■□□□ 1.27
AP1S3-202ENST00000396653 CABP2Q9NPB3 220 aa22.99■■□□□ 1.27
AP1S3-202ENST00000396653 CCDC61Q9Y6R9 512 aa22.99■■□□□ 1.27
AP1S3-202ENST00000396653 CDCA8Q53HL2 280 aa22.98■■□□□ 1.27
AP1S3-202ENST00000396653 ESCO1Q5FWF5 840 aa22.98■■□□□ 1.27
AP1S3-202ENST00000396653 ORAI2Q96SN7 254 aa22.98■■□□□ 1.27
AP1S3-202ENST00000396653 PHLPP1O60346 1717 aa22.98■■□□□ 1.27
AP1S3-202ENST00000396653 SCAF1Q9H7N4 1312 aaKnown RBP22.98■■□□□ 1.27
AP1S3-202ENST00000396653 PHF8Q9UPP1 1060 aa22.96■■□□□ 1.27
AP1S3-202ENST00000396653 PPIP5K1Q6PFW1 1433 aa22.96■■□□□ 1.27
AP1S3-202ENST00000396653 AKAP12Q02952 1782 aa22.95■■□□□ 1.26
AP1S3-202ENST00000396653 COL16A1Q07092 1604 aaPredicted RBP22.95■■□□□ 1.26
AP1S3-202ENST00000396653 NINLQ9Y2I6 1382 aa22.95■■□□□ 1.26
AP1S3-202ENST00000396653 MYOM1P52179 1685 aa22.94■■□□□ 1.26
AP1S3-202ENST00000396653 POLR3AO14802 1390 aaPredicted RBP22.93■■□□□ 1.26
AP1S3-202ENST00000396653 NPHP3Q7Z494 1330 aa22.93■■□□□ 1.26
AP1S3-202ENST00000396653 PLEKHG3A1L390 1219 aa22.93■■□□□ 1.26
AP1S3-202ENST00000396653 PXDNQ92626 1479 aa22.91■■□□□ 1.26
AP1S3-202ENST00000396653 MON2Q7Z3U7 1717 aa22.91■■□□□ 1.26
AP1S3-202ENST00000396653 TRPM3Q9HCF6 1732 aaPredicted RBP22.9■■□□□ 1.26
AP1S3-202ENST00000396653 SOS2Q07890 1332 aaPredicted RBP22.88■■□□□ 1.25
AP1S3-202ENST00000396653 PMFBP1Q8TBY8 1022 aa22.88■■□□□ 1.25
AP1S3-202ENST00000396653 FOXO3O43524 673 aa22.87■■□□□ 1.25
AP1S3-202ENST00000396653 CABP1Q9NZU7 370 aa22.87■■□□□ 1.25
AP1S3-202ENST00000396653 BRD4O60885 1362 aaPredicted RBP22.87■■□□□ 1.25
AP1S3-202ENST00000396653 ACEP12821 1306 aa22.86■■□□□ 1.25
AP1S3-202ENST00000396653 NRKQ7Z2Y5 1582 aa22.86■■□□□ 1.25
AP1S3-202ENST00000396653 CPSF1Q10570 1443 aaKnown RBP22.86■■□□□ 1.25
AP1S3-202ENST00000396653 NGDNQ8NEJ9 315 aaKnown RBP22.86■■□□□ 1.25
AP1S3-202ENST00000396653 CD163L1Q9NR16 1453 aa22.85■■□□□ 1.25
AP1S3-202ENST00000396653 SHPRHQ149N8 1683 aa22.84■■□□□ 1.25
AP1S3-202ENST00000396653 SBNO1A3KN83 1393 aa22.84■■□□□ 1.25
AP1S3-202ENST00000396653 ALS2Q96Q42 1657 aa22.84■■□□□ 1.25
AP1S3-202ENST00000396653 USP6P35125 1406 aa22.83■■□□□ 1.25
AP1S3-202ENST00000396653 HSPA1LP34931 641 aa22.83■■□□□ 1.25
AP1S3-202ENST00000396653 DDX17Q92841 729 aaKnown RBP22.83■■□□□ 1.25
AP1S3-202ENST00000396653 C11orf95C9JLR9 678 aaPredicted RBP22.82■■□□□ 1.24
AP1S3-202ENST00000396653 PSME1Q06323 249 aa22.82■■□□□ 1.24
AP1S3-202ENST00000396653 TMC1Q8TDI8 760 aa22.82■■□□□ 1.24
AP1S3-202ENST00000396653 ZNF692Q9BU19 519 aaPredicted RBP22.82■■□□□ 1.24
AP1S3-202ENST00000396653 KIF7Q2M1P5 1343 aa22.82■■□□□ 1.24
AP1S3-202ENST00000396653 ANKRD36BQ8N2N9 1353 aa22.81■■□□□ 1.24
AP1S3-202ENST00000396653 CCDC7Q96M83 1385 aa22.81■■□□□ 1.24
AP1S3-202ENST00000396653 KRT28Q7Z3Y7 464 aa22.81■■□□□ 1.24
AP1S3-202ENST00000396653 SLC12A5Q9H2X9 1139 aa22.81■■□□□ 1.24
AP1S3-202ENST00000396653 TNS3Q68CZ2 1445 aa22.81■■□□□ 1.24
AP1S3-202ENST00000396653 COL22A1Q8NFW1 1626 aaPredicted RBP22.8■■□□□ 1.24
AP1S3-202ENST00000396653 TERF2IPQ9NYB0 399 aa22.8■■□□□ 1.24
AP1S3-202ENST00000396653 A0A1W2PP64 1363 aa22.79■■□□□ 1.24
AP1S3-202ENST00000396653 HDGFL2Q7Z4V5 671 aaPredicted RBP22.79■■□□□ 1.24
AP1S3-202ENST00000396653 LRRC59Q96AG4 307 aaKnown RBP22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms