RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 CARD11Q9BXL7 1154 aa10.71□□□□□ -0.7
NDE1-202ENST00000396355 PLA2R1Q13018 1463 aa10.71□□□□□ -0.7
NDE1-202ENST00000396355 TRERF1Q96PN7 1200 aa10.7□□□□□ -0.7
NDE1-202ENST00000396355 ESPNB1AK53 854 aa10.7□□□□□ -0.7
NDE1-202ENST00000396355 UNC13BO14795 1591 aa10.7□□□□□ -0.7
NDE1-202ENST00000396355 CERS3Q8IU89 383 aa10.7□□□□□ -0.7
NDE1-202ENST00000396355 MYO5CQ9NQX4 1742 aa10.7□□□□□ -0.7
NDE1-202ENST00000396355 ARHGEF40Q8TER5 1519 aa10.7□□□□□ -0.7
NDE1-202ENST00000396355 TPM2P07951 284 aa10.69□□□□□ -0.7
NDE1-202ENST00000396355 CBX1P83916 185 aa10.69□□□□□ -0.7
NDE1-202ENST00000396355 PROSER2Q86WR7 435 aaPredicted RBP10.69□□□□□ -0.7
NDE1-202ENST00000396355 SMG6Q86US8 1419 aaKnown RBP10.69□□□□□ -0.7
NDE1-202ENST00000396355 EXOC6Q8TAG9 804 aa10.68□□□□□ -0.7
NDE1-202ENST00000396355 PNISRQ8TF01 805 aaKnown RBP10.68□□□□□ -0.7
NDE1-202ENST00000396355 RBM33Q96EV2 1170 aaKnown RBP10.68□□□□□ -0.7
NDE1-202ENST00000396355 CFAP74Q9C0B2 1584 aa10.68□□□□□ -0.7
NDE1-202ENST00000396355 PRAG1Q86YV5 1406 aa10.68□□□□□ -0.7
NDE1-202ENST00000396355 MAST1Q9Y2H9 1570 aa10.67□□□□□ -0.7
NDE1-202ENST00000396355 PANK2Q9BZ23 570 aa10.67□□□□□ -0.7
NDE1-202ENST00000396355 SETD1BQ9UPS6 1966 aaKnown RBP10.67□□□□□ -0.7
NDE1-202ENST00000396355 A2MP01023 1474 aa10.67□□□□□ -0.7
NDE1-202ENST00000396355 PTMSP20962 102 aa10.66□□□□□ -0.7
NDE1-202ENST00000396355 ROCK2O75116 1388 aaKnown RBP10.66□□□□□ -0.7
NDE1-202ENST00000396355 RSPH4AQ5TD94 716 aa10.66□□□□□ -0.7
NDE1-202ENST00000396355 IQGAP3Q86VI3 1631 aa10.66□□□□□ -0.7
NDE1-202ENST00000396355 LRPPRCP42704 1394 aaKnown RBP10.66□□□□□ -0.7
NDE1-202ENST00000396355 TNRQ92752 1358 aa10.66□□□□□ -0.7
NDE1-202ENST00000396355 PLXNC1O60486 1568 aa10.66□□□□□ -0.7
NDE1-202ENST00000396355 NBPF1Q3BBV0 1214 aa10.65□□□□□ -0.7
NDE1-202ENST00000396355 ADAMTSL3P82987 1691 aa10.65□□□□□ -0.7
NDE1-202ENST00000396355 RNF123Q5XPI4 1314 aa10.65□□□□□ -0.7
NDE1-202ENST00000396355 PLEKHH2Q8IVE3 1493 aa10.65□□□□□ -0.7
NDE1-202ENST00000396355 SLC26A8Q96RN1 970 aa10.65□□□□□ -0.71
NDE1-202ENST00000396355 CCDC144AA2RUR9 1427 aa10.64□□□□□ -0.71
NDE1-202ENST00000396355 CALD1Q05682 793 aaKnown RBP10.64□□□□□ -0.71
NDE1-202ENST00000396355 NUDCQ9Y266 331 aa10.64□□□□□ -0.71
NDE1-202ENST00000396355 FOXD4L1Q9NU39 408 aa10.64□□□□□ -0.71
NDE1-202ENST00000396355 PLIN1O60240 522 aa10.63□□□□□ -0.71
NDE1-202ENST00000396355 PRDM15P57071 1507 aaPredicted RBP10.63□□□□□ -0.71
NDE1-202ENST00000396355 NUTM2BA6NNL0 878 aaPredicted RBP10.63□□□□□ -0.71
NDE1-202ENST00000396355 NUTM2EB1AL46 878 aaPredicted RBP10.63□□□□□ -0.71
NDE1-202ENST00000396355 RGL3Q3MIN7 710 aa10.63□□□□□ -0.71
NDE1-202ENST00000396355 NUTM2AQ8IVF1 878 aaPredicted RBP10.63□□□□□ -0.71
NDE1-202ENST00000396355 PTPRTO14522 1441 aa10.63□□□□□ -0.71
NDE1-202ENST00000396355 HDGFP51858 240 aaKnown RBP10.63□□□□□ -0.71
NDE1-202ENST00000396355 RBM25P49756 843 aaKnown RBP10.62□□□□□ -0.71
NDE1-202ENST00000396355 MAP7D2Q96T17 732 aa10.62□□□□□ -0.71
NDE1-202ENST00000396355 MPNDQ8N594 471 aa10.62□□□□□ -0.71
NDE1-202ENST00000396355 GPRASP1Q5JY77 1395 aa10.62□□□□□ -0.71
NDE1-202ENST00000396355 UQCRHLA0A096LP55 91 aa10.62□□□□□ -0.71
NDE1-202ENST00000396355 GOLGA6L22H0YM25 854 aa10.62□□□□□ -0.71
NDE1-202ENST00000396355 UQCRHP07919 91 aa10.62□□□□□ -0.71
NDE1-202ENST00000396355 LAMC1P11047 1609 aa10.61□□□□□ -0.71
NDE1-202ENST00000396355 MYBBP1AQ9BQG0 1328 aaKnown RBP10.61□□□□□ -0.71
NDE1-202ENST00000396355 FER1L4A9Z1Z3 1794 aa10.61□□□□□ -0.71
NDE1-202ENST00000396355 IRX3P78415 501 aaPredicted RBP10.61□□□□□ -0.71
NDE1-202ENST00000396355 NUTM2DQ5VT03 806 aaPredicted RBP10.61□□□□□ -0.71
NDE1-202ENST00000396355 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.61□□□□□ -0.71
NDE1-202ENST00000396355 ZFP91Q96JP5 570 aaPredicted RBP10.61□□□□□ -0.71
NDE1-202ENST00000396355 PARD3Q8TEW0 1356 aa10.61□□□□□ -0.71
NDE1-202ENST00000396355 PER1O15534 1290 aaPredicted RBP10.6□□□□□ -0.71
NDE1-202ENST00000396355 BRD4O60885 1362 aaPredicted RBP10.6□□□□□ -0.71
NDE1-202ENST00000396355 KANK1Q14678 1352 aa10.6□□□□□ -0.71
NDE1-202ENST00000396355 TESK2Q96S53 571 aa10.6□□□□□ -0.71
NDE1-202ENST00000396355 RNF17Q9BXT8 1623 aaKnown RBP10.6□□□□□ -0.71
NDE1-202ENST00000396355 CLCN1P35523 988 aa10.6□□□□□ -0.71
NDE1-202ENST00000396355 KCNJ4P48050 445 aa10.59□□□□□ -0.71
NDE1-202ENST00000396355 BACH2Q9BYV9 841 aa10.59□□□□□ -0.71
NDE1-202ENST00000396355 DUOX2Q9NRD8 1548 aa10.58□□□□□ -0.72
NDE1-202ENST00000396355 WWC1Q8IX03 1113 aa10.58□□□□□ -0.72
NDE1-202ENST00000396355 ABCC1P33527 1531 aa10.58□□□□□ -0.72
NDE1-202ENST00000396355 MLH3Q9UHC1 1453 aa10.58□□□□□ -0.72
NDE1-202ENST00000396355 SPDYE4A6NLX3 237 aa10.58□□□□□ -0.72
NDE1-202ENST00000396355 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.58□□□□□ -0.72
NDE1-202ENST00000396355 IPO4Q8TEX9 1081 aaKnown RBP10.58□□□□□ -0.72
NDE1-202ENST00000396355 CAMSAP1Q5T5Y3 1602 aa10.58□□□□□ -0.72
NDE1-202ENST00000396355 ATF3P18847 181 aa10.58□□□□□ -0.72
NDE1-202ENST00000396355 PPP4R3BQ5MIZ7 849 aa10.58□□□□□ -0.72
NDE1-202ENST00000396355 ERICH4A6NGS2 130 aa10.57□□□□□ -0.72
NDE1-202ENST00000396355 TNNT1P13805 278 aa10.57□□□□□ -0.72
NDE1-202ENST00000396355 ZBTB9Q96C00 473 aa10.57□□□□□ -0.72
NDE1-202ENST00000396355 KTN1Q86UP2 1357 aaKnown RBP10.57□□□□□ -0.72
NDE1-202ENST00000396355 FRMPD1Q5SYB0 1578 aa10.57□□□□□ -0.72
NDE1-202ENST00000396355 XRCC6P12956 609 aaKnown RBP eCLIP10.56□□□□□ -0.728e-7■■□□□ 11.8
NDE1-202ENST00000396355 MRE11P49959 708 aa10.56□□□□□ -0.72
NDE1-202ENST00000396355 RALBP1Q15311 655 aa10.56□□□□□ -0.72
NDE1-202ENST00000396355 FTSJ3Q8IY81 847 aaKnown RBP10.56□□□□□ -0.72
NDE1-202ENST00000396355 ERBINQ96RT1 1412 aa10.56□□□□□ -0.72
NDE1-202ENST00000396355 EIF2AK4Q9P2K8 1649 aaKnown RBP10.56□□□□□ -0.72
NDE1-202ENST00000396355 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.56□□□□□ -0.72
NDE1-202ENST00000396355 CHAF1AQ13111 956 aaPredicted RBP10.56□□□□□ -0.72
NDE1-202ENST00000396355 BRD2P25440 801 aaKnown RBP10.55□□□□□ -0.72
NDE1-202ENST00000396355 HSP90AB1P08238 724 aaKnown RBP10.55□□□□□ -0.72
NDE1-202ENST00000396355 SPATA31D1Q6ZQQ2 1576 aa10.55□□□□□ -0.72
NDE1-202ENST00000396355 RCAN3Q9UKA8 241 aa10.55□□□□□ -0.72
NDE1-202ENST00000396355 IQGAP1P46940 1657 aa10.55□□□□□ -0.72
NDE1-202ENST00000396355 ZMYM4Q5VZL5 1548 aa10.55□□□□□ -0.72
NDE1-202ENST00000396355 TRAK2O60296 914 aa10.54□□□□□ -0.72
NDE1-202ENST00000396355 XPCQ01831 940 aaPredicted RBP10.54□□□□□ -0.72
NDE1-202ENST00000396355 NLRP13Q86W25 1043 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms