RNA–Protein interactions for RNA: ENST00000395495.5

A1CF-207, Transcript of APOBEC1 complementation factor, humanhuman

TSL 5 BASIC

Gene A1CF, Length 9,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-207ENST00000395495 SPRYD3Q8NCJ5 442 aa6.32□□□□□ -1.4
A1CF-207ENST00000395495 ERCC4Q92889 916 aaPredicted RBP6.32□□□□□ -1.4
A1CF-207ENST00000395495 IPO9Q96P70 1041 aaKnown RBP6.32□□□□□ -1.4
A1CF-207ENST00000395495 HSP90B2PQ58FF3 399 aa6.31□□□□□ -1.4
A1CF-207ENST00000395495 RNF20Q5VTR2 975 aa6.31□□□□□ -1.4
A1CF-207ENST00000395495 ATF5Q9Y2D1 282 aaPredicted RBP6.31□□□□□ -1.4
A1CF-207ENST00000395495 NOP2P46087 812 aaKnown RBP6.31□□□□□ -1.4
A1CF-207ENST00000395495 TXLNBQ8N3L3 684 aa6.31□□□□□ -1.4
A1CF-207ENST00000395495 CDK5RAP3Q96JB5 506 aa6.31□□□□□ -1.4
A1CF-207ENST00000395495 LTV1Q96GA3 475 aaPredicted RBP6.31□□□□□ -1.4
A1CF-207ENST00000395495 CCDC125Q86Z20 511 aa6.31□□□□□ -1.4
A1CF-207ENST00000395495 ARGLU1Q9NWB6 273 aaPredicted RBP6.31□□□□□ -1.4
A1CF-207ENST00000395495 SNAPC4Q5SXM2 1469 aa6.3□□□□□ -1.4
A1CF-207ENST00000395495 KTN1Q86UP2 1357 aaKnown RBP6.3□□□□□ -1.4
A1CF-207ENST00000395495 PABPN1LA6NDY0 278 aaKnown RBP6.3□□□□□ -1.4
A1CF-207ENST00000395495 PIP4K2AP48426 406 aaPredicted RBP6.3□□□□□ -1.4
A1CF-207ENST00000395495 ARAP1Q96P48 1450 aa6.3□□□□□ -1.4
A1CF-207ENST00000395495 GOLGA6L7A0A1B0GV03 622 aa6.3□□□□□ -1.4
A1CF-207ENST00000395495 ANKRD62A6NC57 917 aa6.3□□□□□ -1.4
A1CF-207ENST00000395495 LUC7LQ9NQ29 371 aaKnown RBP6.3□□□□□ -1.4
A1CF-207ENST00000395495 AFF2P51816 1311 aa6.3□□□□□ -1.4
A1CF-207ENST00000395495 CENPJQ9HC77 1338 aaPredicted RBP6.3□□□□□ -1.4
A1CF-207ENST00000395495 KRT18P05783 430 aaKnown RBP6.3□□□□□ -1.4
A1CF-207ENST00000395495 AKNAQ7Z591 1439 aa6.3□□□□□ -1.4
A1CF-207ENST00000395495 STK11IPQ8N1F8 1099 aa6.3□□□□□ -1.4
A1CF-207ENST00000395495 HOMER2Q9NSB8 354 aa6.3□□□□□ -1.4
A1CF-207ENST00000395495 ZNF219Q9P2Y4 722 aaPredicted RBP6.3□□□□□ -1.4
A1CF-207ENST00000395495 SART3Q15020 963 aaKnown RBP6.29□□□□□ -1.4
A1CF-207ENST00000395495 CLEC11AQ9Y240 323 aa6.29□□□□□ -1.4
A1CF-207ENST00000395495 INCENPQ9NQS7 918 aa6.29□□□□□ -1.4
A1CF-207ENST00000395495 STAMBPO95630 424 aa6.29□□□□□ -1.4
A1CF-207ENST00000395495 C9orf78Q9NZ63 289 aaPredicted RBP6.29□□□□□ -1.4
A1CF-207ENST00000395495 MFAP1P55081 439 aaKnown RBP6.29□□□□□ -1.4
A1CF-207ENST00000395495 WDR70Q9NW82 654 aa6.29□□□□□ -1.4
A1CF-207ENST00000395495 WWC3Q9ULE0 1092 aa6.29□□□□□ -1.4
A1CF-207ENST00000395495 TXLNAP40222 546 aa6.29□□□□□ -1.4
A1CF-207ENST00000395495 RALYLQ86SE5 291 aaKnown RBP6.29□□□□□ -1.4
A1CF-207ENST00000395495 DCAF11Q8TEB1 546 aa6.29□□□□□ -1.4
A1CF-207ENST00000395495 ABCC8Q09428 1581 aa6.28□□□□□ -1.4
A1CF-207ENST00000395495 NOL8Q76FK4 1167 aaKnown RBP6.28□□□□□ -1.4
A1CF-207ENST00000395495 ZNHIT6Q9NWK9 470 aaKnown RBP6.28□□□□□ -1.4
A1CF-207ENST00000395495 RABEP1Q15276 862 aa6.28□□□□□ -1.4
A1CF-207ENST00000395495 ATAD2Q6PL18 1390 aa6.28□□□□□ -1.4
A1CF-207ENST00000395495 IFIT2P09913 472 aaKnown RBP6.28□□□□□ -1.4
A1CF-207ENST00000395495 POTEJP0CG39 1038 aa6.28□□□□□ -1.4
A1CF-207ENST00000395495 HSP90AA2PQ14568 343 aaPredicted RBP6.28□□□□□ -1.4
A1CF-207ENST00000395495 GBP2P32456 591 aaPredicted RBP6.28□□□□□ -1.4
A1CF-207ENST00000395495 OLFM4Q6UX06 510 aa6.28□□□□□ -1.4
A1CF-207ENST00000395495 B4GALNT3Q6L9W6 998 aa6.28□□□□□ -1.4
A1CF-207ENST00000395495 PPM1EQ8WY54 764 aa6.28□□□□□ -1.4
A1CF-207ENST00000395495 CCDC27Q2M243 656 aa6.27□□□□□ -1.41
A1CF-207ENST00000395495 NUTM2FA1L443 756 aa6.27□□□□□ -1.41
A1CF-207ENST00000395495 DRC1Q96MC2 740 aa6.27□□□□□ -1.41
A1CF-207ENST00000395495 GNL3LQ9NVN8 582 aaKnown RBP6.27□□□□□ -1.41
A1CF-207ENST00000395495 MAGEC2Q9UBF1 373 aaPredicted RBP6.27□□□□□ -1.41
A1CF-207ENST00000395495 H0YHG0 523 aa6.27□□□□□ -1.41
A1CF-207ENST00000395495 ARID3AQ99856 593 aa6.27□□□□□ -1.41
A1CF-207ENST00000395495 EPB41L2O43491 1005 aaKnown RBP6.27□□□□□ -1.41
A1CF-207ENST00000395495 G3BP1Q13283 466 aaKnown RBP eCLIP6.27□□□□□ -1.417e-7■■□□□ 11.6
A1CF-207ENST00000395495 DDX11L8A8MPP1 907 aa6.27□□□□□ -1.41
A1CF-207ENST00000395495 CCDC73Q6ZRK6 1079 aa6.27□□□□□ -1.41
A1CF-207ENST00000395495 MNS1Q8NEH6 495 aa6.27□□□□□ -1.41
A1CF-207ENST00000395495 LRRC59Q96AG4 307 aaKnown RBP6.27□□□□□ -1.41
A1CF-207ENST00000395495 TBC1D2BQ9UPU7 963 aa6.27□□□□□ -1.41
A1CF-207ENST00000395495 SLC4A3P48751 1232 aa6.26□□□□□ -1.41
A1CF-207ENST00000395495 PPP4R3AQ6IN85 833 aa6.26□□□□□ -1.41
A1CF-207ENST00000395495 CETN2P41208 172 aa6.26□□□□□ -1.41
A1CF-207ENST00000395495 C1QTNF8P60827 252 aa6.26□□□□□ -1.41
A1CF-207ENST00000395495 DEFB132Q7Z7B7 95 aa6.26□□□□□ -1.41
A1CF-207ENST00000395495 TMOD2Q9NZR1 351 aa6.26□□□□□ -1.41
A1CF-207ENST00000395495 FHAD1B1AJZ9 1412 aa6.26□□□□□ -1.41
A1CF-207ENST00000395495 SMARCE1Q969G3 411 aa6.26□□□□□ -1.41
A1CF-207ENST00000395495 NAT10Q9H0A0 1025 aaKnown RBP6.26□□□□□ -1.41
A1CF-207ENST00000395495 CCDC91Q7Z6B0 441 aa6.26□□□□□ -1.41
A1CF-207ENST00000395495 ERC1Q8IUD2 1116 aa6.26□□□□□ -1.41
A1CF-207ENST00000395495 SLC26A8Q96RN1 970 aa6.26□□□□□ -1.41
A1CF-207ENST00000395495 ENOX2Q16206 610 aaKnown RBP6.26□□□□□ -1.41
A1CF-207ENST00000395495 FAM161AQ3B820 660 aa6.26□□□□□ -1.41
A1CF-207ENST00000395495 RTN4Q9NQC3 1192 aaKnown RBP6.26□□□□□ -1.41
A1CF-207ENST00000395495 GOLGA6L10A6NI86 522 aa6.26□□□□□ -1.41
A1CF-207ENST00000395495 RILPL2Q969X0 211 aa6.26□□□□□ -1.41
A1CF-207ENST00000395495 HIRIP3Q9BW71 556 aaPredicted RBP6.26□□□□□ -1.41
A1CF-207ENST00000395495 SKOR2Q2VWA4 1001 aaPredicted RBP6.25□□□□□ -1.41
A1CF-207ENST00000395495 BICD2Q8TD16 824 aa6.25□□□□□ -1.41
A1CF-207ENST00000395495 COG3Q96JB2 828 aa6.25□□□□□ -1.41
A1CF-207ENST00000395495 SSX2IPQ9Y2D8 614 aa6.25□□□□□ -1.41
A1CF-207ENST00000395495 CWC15Q9P013 229 aaKnown RBP6.25□□□□□ -1.41
A1CF-207ENST00000395495 STRN4Q9NRL3 753 aa6.25□□□□□ -1.41
A1CF-207ENST00000395495 ANO2Q9NQ90 1003 aa6.25□□□□□ -1.41
A1CF-207ENST00000395495 MSH6P52701 1360 aa6.25□□□□□ -1.41
A1CF-207ENST00000395495 RAPGEF4Q8WZA2 1011 aa6.25□□□□□ -1.41
A1CF-207ENST00000395495 SCLT1Q96NL6 688 aa6.25□□□□□ -1.41
A1CF-207ENST00000395495 FILIP1LQ4L180 1135 aa6.25□□□□□ -1.41
A1CF-207ENST00000395495 DDX23Q9BUQ8 820 aaKnown RBP6.25□□□□□ -1.41
A1CF-207ENST00000395495 ANAPC15P60006 121 aa6.25□□□□□ -1.41
A1CF-207ENST00000395495 ZNF771Q7L3S4 317 aaPredicted RBP6.25□□□□□ -1.41
A1CF-207ENST00000395495 SLKQ9H2G2 1235 aaPredicted RBP6.25□□□□□ -1.41
A1CF-207ENST00000395495 REC8O95072 547 aa6.24□□□□□ -1.41
A1CF-207ENST00000395495 MATR3P43243 847 aaKnown RBP eCLIP6.24□□□□□ -1.41
A1CF-207ENST00000395495 GZF1Q9H116 711 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 969.1 ms