RNA–Protein interactions for RNA: ENST00000395360.6

RAPGEF3-203, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 2,325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-203ENST00000395360 CDCA7LQ96GN5 454 aa20.62■□□□□ 0.89
RAPGEF3-203ENST00000395360 ADAMTS8Q9UP79 889 aa20.62■□□□□ 0.89
RAPGEF3-203ENST00000395360 RCAN3Q9UKA8 241 aa20.61■□□□□ 0.89
RAPGEF3-203ENST00000395360 TXNDC2Q86VQ3 553 aa20.6■□□□□ 0.89
RAPGEF3-203ENST00000395360 ANKLE2Q86XL3 938 aa20.6■□□□□ 0.89
RAPGEF3-203ENST00000395360 CCDC136Q96JN2 1154 aa20.6■□□□□ 0.89
RAPGEF3-203ENST00000395360 PIK3C2GO75747 1445 aa20.59■□□□□ 0.89
RAPGEF3-203ENST00000395360 RRP1P56182 461 aaKnown RBP20.59■□□□□ 0.89
RAPGEF3-203ENST00000395360 NPC1L1Q9UHC9 1359 aa20.59■□□□□ 0.89
RAPGEF3-203ENST00000395360 LTKP29376 864 aa20.58■□□□□ 0.89
RAPGEF3-203ENST00000395360 WDR43Q15061 677 aaKnown RBP eCLIP20.58■□□□□ 0.89
RAPGEF3-203ENST00000395360 C14orf93Q9H972 538 aaKnown RBP20.58■□□□□ 0.89
RAPGEF3-203ENST00000395360 TRAK1Q9UPV9 953 aa20.58■□□□□ 0.89
RAPGEF3-203ENST00000395360 SETBP1Q9Y6X0 1596 aa20.58■□□□□ 0.89
RAPGEF3-203ENST00000395360 PLEKHG1Q9ULL1 1385 aa20.58■□□□□ 0.88
RAPGEF3-203ENST00000395360 CENPJQ9HC77 1338 aaPredicted RBP20.57■□□□□ 0.88
RAPGEF3-203ENST00000395360 NUTM2DQ5VT03 806 aaPredicted RBP20.57■□□□□ 0.88
RAPGEF3-203ENST00000395360 SBNO2Q9Y2G9 1366 aa20.57■□□□□ 0.88
RAPGEF3-203ENST00000395360 TMEM132EQ6IEE7 984 aa20.55■□□□□ 0.88
RAPGEF3-203ENST00000395360 CARD14Q9BXL6 1004 aa20.55■□□□□ 0.88
RAPGEF3-203ENST00000395360 MED14O60244 1454 aa20.54■□□□□ 0.88
RAPGEF3-203ENST00000395360 ADGRB1O14514 1584 aa20.53■□□□□ 0.88
RAPGEF3-203ENST00000395360 HSPA2P54652 639 aa20.53■□□□□ 0.88
RAPGEF3-203ENST00000395360 AEBP2Q6ZN18 517 aaPredicted RBP20.53■□□□□ 0.88
RAPGEF3-203ENST00000395360 NRXN3Q9Y4C0 1643 aa20.51■□□□□ 0.87
RAPGEF3-203ENST00000395360 DIP2AQ14689 1571 aa20.5■□□□□ 0.87
RAPGEF3-203ENST00000395360 NPHP4O75161 1426 aaPredicted RBP20.5■□□□□ 0.87
RAPGEF3-203ENST00000395360 EXOC6Q8TAG9 804 aa20.49■□□□□ 0.87
RAPGEF3-203ENST00000395360 ALKQ9UM73 1620 aa20.49■□□□□ 0.87
RAPGEF3-203ENST00000395360 QRICH2Q9H0J4 1663 aa20.48■□□□□ 0.87
RAPGEF3-203ENST00000395360 ADAMTS13Q76LX8 1427 aa20.48■□□□□ 0.87
RAPGEF3-203ENST00000395360 NCKAP5LQ9HCH0 1330 aa20.48■□□□□ 0.87
RAPGEF3-203ENST00000395360 PLEKHH1Q9ULM0 1364 aa20.48■□□□□ 0.87
RAPGEF3-203ENST00000395360 FANCIQ9NVI1 1328 aa20.46■□□□□ 0.87
RAPGEF3-203ENST00000395360 STRCQ7RTU9 1775 aa20.46■□□□□ 0.87
RAPGEF3-203ENST00000395360 SLC12A5Q9H2X9 1139 aa20.45■□□□□ 0.87
RAPGEF3-203ENST00000395360 TBX22Q9Y458 520 aa20.45■□□□□ 0.87
RAPGEF3-203ENST00000395360 SETD1AO15047 1707 aaKnown RBP20.45■□□□□ 0.86
RAPGEF3-203ENST00000395360 PLIN1O60240 522 aa20.44■□□□□ 0.86
RAPGEF3-203ENST00000395360 CCDC146Q8IYE0 955 aa20.44■□□□□ 0.86
RAPGEF3-203ENST00000395360 ANP32EQ9BTT0 268 aa20.44■□□□□ 0.86
RAPGEF3-203ENST00000395360 ZNF521Q96K83 1311 aa20.43■□□□□ 0.86
RAPGEF3-203ENST00000395360 NSD3Q9BZ95 1437 aa20.43■□□□□ 0.86
RAPGEF3-203ENST00000395360 PIK3R4Q99570 1358 aa20.42■□□□□ 0.86
RAPGEF3-203ENST00000395360 GOLGA2Q08379 1002 aa20.41■□□□□ 0.86
RAPGEF3-203ENST00000395360 DUSP27Q5VZP5 1158 aa20.41■□□□□ 0.86
RAPGEF3-203ENST00000395360 SLC26A8Q96RN1 970 aa20.41■□□□□ 0.86
RAPGEF3-203ENST00000395360 SENP3Q9H4L4 574 aaPredicted RBP20.41■□□□□ 0.86
RAPGEF3-203ENST00000395360 DMRT2Q9Y5R5 561 aa20.41■□□□□ 0.86
RAPGEF3-203ENST00000395360 MSH5O43196 834 aa20.4■□□□□ 0.86
RAPGEF3-203ENST00000395360 METP08581 1390 aa20.39■□□□□ 0.85
RAPGEF3-203ENST00000395360 APAF1O14727 1248 aa20.38■□□□□ 0.85
RAPGEF3-203ENST00000395360 MORC1Q86VD1 984 aa20.38■□□□□ 0.85
RAPGEF3-203ENST00000395360 ARHGEF28Q8N1W1 1705 aaKnown RBP20.38■□□□□ 0.85
RAPGEF3-203ENST00000395360 EVC2Q86UK5 1308 aa20.38■□□□□ 0.85
RAPGEF3-203ENST00000395360 TNNT2P45379 298 aaPredicted RBP20.37■□□□□ 0.85
RAPGEF3-203ENST00000395360 BCL11AQ9H165 835 aa20.37■□□□□ 0.85
RAPGEF3-203ENST00000395360 YTHDC2Q9H6S0 1430 aaKnown RBP20.37■□□□□ 0.85
RAPGEF3-203ENST00000395360 SAFB2Q14151 953 aaKnown RBP eCLIP20.36■□□□□ 0.85
RAPGEF3-203ENST00000395360 POLR3AO14802 1390 aaPredicted RBP20.36■□□□□ 0.85
RAPGEF3-203ENST00000395360 TULP4Q9NRJ4 1543 aa20.35■□□□□ 0.85
RAPGEF3-203ENST00000395360 ABCC11Q96J66 1382 aa20.35■□□□□ 0.85
RAPGEF3-203ENST00000395360 STK26Q9P289 416 aa20.35■□□□□ 0.85
RAPGEF3-203ENST00000395360 SLFN5Q08AF3 891 aa20.34■□□□□ 0.85
RAPGEF3-203ENST00000395360 TECPR2O15040 1411 aa20.34■□□□□ 0.85
RAPGEF3-203ENST00000395360 PUS7Q96PZ0 661 aaKnown RBP20.33■□□□□ 0.85
RAPGEF3-203ENST00000395360 CRBNQ96SW2 442 aa20.33■□□□□ 0.85
RAPGEF3-203ENST00000395360 CABP2Q9NPB3 220 aa20.33■□□□□ 0.85
RAPGEF3-203ENST00000395360 KNDC1Q76NI1 1749 aa20.33■□□□□ 0.84
RAPGEF3-203ENST00000395360 CGNL1Q0VF96 1302 aa20.33■□□□□ 0.84
RAPGEF3-203ENST00000395360 DLC1Q96QB1 1528 aa20.32■□□□□ 0.84
RAPGEF3-203ENST00000395360 CHD2O14647 1828 aaKnown RBP20.32■□□□□ 0.84
RAPGEF3-203ENST00000395360 PTPRUQ92729 1446 aa20.31■□□□□ 0.84
RAPGEF3-203ENST00000395360 C20orf194Q5TEA3 1177 aa20.31■□□□□ 0.84
RAPGEF3-203ENST00000395360 SPINK5Q9NQ38 1064 aaPredicted RBP20.31■□□□□ 0.84
RAPGEF3-203ENST00000395360 XRN1Q8IZH2 1706 aaKnown RBP20.31■□□□□ 0.84
RAPGEF3-203ENST00000395360 NWD1Q149M9 1564 aa20.31■□□□□ 0.84
RAPGEF3-203ENST00000395360 CPS1P31327 1500 aa20.3■□□□□ 0.84
RAPGEF3-203ENST00000395360 SIRT1Q96EB6 747 aa20.3■□□□□ 0.84
RAPGEF3-203ENST00000395360 ANKRD36BQ8N2N9 1353 aa20.3■□□□□ 0.84
RAPGEF3-203ENST00000395360 KCNA6P17658 529 aa20.3■□□□□ 0.84
RAPGEF3-203ENST00000395360 TRMT2AQ8IZ69 625 aaKnown RBP20.3■□□□□ 0.84
RAPGEF3-203ENST00000395360 AMOTL2Q9Y2J4 779 aa20.3■□□□□ 0.84
RAPGEF3-203ENST00000395360 PTCH1Q13635 1447 aa20.29■□□□□ 0.84
RAPGEF3-203ENST00000395360 USP32Q8NFA0 1604 aa20.29■□□□□ 0.84
RAPGEF3-203ENST00000395360 FAM135BQ49AJ0 1406 aa20.28■□□□□ 0.84
RAPGEF3-203ENST00000395360 SRPK2P78362 688 aaKnown RBP20.27■□□□□ 0.84
RAPGEF3-203ENST00000395360 MTHFSP49914 203 aa20.27■□□□□ 0.84
RAPGEF3-203ENST00000395360 NGEFQ8N5V2 710 aa20.27■□□□□ 0.84
RAPGEF3-203ENST00000395360 NKTRP30414 1462 aaKnown RBP20.26■□□□□ 0.83
RAPGEF3-203ENST00000395360 E9PSI1 815 aa20.26■□□□□ 0.83
RAPGEF3-203ENST00000395360 SHPRHQ149N8 1683 aa20.26■□□□□ 0.83
RAPGEF3-203ENST00000395360 PRAM1Q96QH2 718 aa20.25■□□□□ 0.83
RAPGEF3-203ENST00000395360 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.24■□□□□ 0.83
RAPGEF3-203ENST00000395360 MINK1Q8N4C8 1332 aaPredicted RBP20.24■□□□□ 0.83
RAPGEF3-203ENST00000395360 WWC1Q8IX03 1113 aa20.24■□□□□ 0.83
RAPGEF3-203ENST00000395360 POGKQ9P215 609 aa20.24■□□□□ 0.83
RAPGEF3-203ENST00000395360 ROBO2Q9HCK4 1378 aa20.23■□□□□ 0.83
RAPGEF3-203ENST00000395360 A0A1W2PP64 1363 aa20.23■□□□□ 0.83
RAPGEF3-203ENST00000395360 NSD2O96028 1365 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms