RNA–Protein interactions for RNA: ENST00000394997.5

HIF1A-203, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HIF1A, Length 3,922 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-203ENST00000394997 PPP4R2Q9NY27 417 aa13.87□□□□□ -0.19
HIF1A-203ENST00000394997 CDCA7LQ96GN5 454 aa13.86□□□□□ -0.19
HIF1A-203ENST00000394997 USP54Q70EL1 1684 aa13.86□□□□□ -0.19
HIF1A-203ENST00000394997 RGPD1P0DJD0 1748 aa13.86□□□□□ -0.19
HIF1A-203ENST00000394997 DLG5Q8TDM6 1919 aa13.85□□□□□ -0.19
HIF1A-203ENST00000394997 ADAMTS8Q9UP79 889 aa13.84□□□□□ -0.19
HIF1A-203ENST00000394997 MAP2P11137 1827 aaKnown RBP13.84□□□□□ -0.19
HIF1A-203ENST00000394997 PUS7Q96PZ0 661 aaKnown RBP13.84□□□□□ -0.19
HIF1A-203ENST00000394997 CC2D1BQ5T0F9 858 aaKnown RBP13.83□□□□□ -0.2
HIF1A-203ENST00000394997 SPINK5Q9NQ38 1064 aaPredicted RBP13.83□□□□□ -0.2
HIF1A-203ENST00000394997 IDI1Q13907 227 aa13.82□□□□□ -0.2
HIF1A-203ENST00000394997 DUSP27Q5VZP5 1158 aa13.82□□□□□ -0.2
HIF1A-203ENST00000394997 TMC1Q8TDI8 760 aa13.82□□□□□ -0.2
HIF1A-203ENST00000394997 DMRT2Q9Y5R5 561 aa13.82□□□□□ -0.2
HIF1A-203ENST00000394997 TECPR2O15040 1411 aa13.81□□□□□ -0.2
HIF1A-203ENST00000394997 NSD3Q9BZ95 1437 aa13.81□□□□□ -0.2
HIF1A-203ENST00000394997 ITSN1Q15811 1721 aa13.8□□□□□ -0.2
HIF1A-203ENST00000394997 SENP3-EIF4A1A0A087X0R7 540 aa13.8□□□□□ -0.2
HIF1A-203ENST00000394997 RRP1P56182 461 aaKnown RBP13.8□□□□□ -0.2
HIF1A-203ENST00000394997 ABCC11Q96J66 1382 aa13.8□□□□□ -0.2
HIF1A-203ENST00000394997 YTHDC2Q9H6S0 1430 aaKnown RBP13.8□□□□□ -0.2
HIF1A-203ENST00000394997 PDE3BQ13370 1112 aa13.79□□□□□ -0.2
HIF1A-203ENST00000394997 ANKRD36BQ8N2N9 1353 aa13.79□□□□□ -0.2
HIF1A-203ENST00000394997 POLR3GLQ9BT43 218 aa13.79□□□□□ -0.2
HIF1A-203ENST00000394997 CENPJQ9HC77 1338 aaPredicted RBP13.78□□□□□ -0.2
HIF1A-203ENST00000394997 PEAK1Q9H792 1746 aa13.78□□□□□ -0.2
HIF1A-203ENST00000394997 B4GALNT3Q6L9W6 998 aa13.78□□□□□ -0.2
HIF1A-203ENST00000394997 FANCIQ9NVI1 1328 aa13.78□□□□□ -0.2
HIF1A-203ENST00000394997 XRN1Q8IZH2 1706 aaKnown RBP13.78□□□□□ -0.2
HIF1A-203ENST00000394997 RGPD8O14715 1765 aaPredicted RBP13.77□□□□□ -0.2
HIF1A-203ENST00000394997 KDM2BQ8NHM5 1336 aa13.77□□□□□ -0.21
HIF1A-203ENST00000394997 RTN4Q9NQC3 1192 aaKnown RBP13.77□□□□□ -0.21
HIF1A-203ENST00000394997 PNPLA6Q8IY17 1366 aa13.77□□□□□ -0.21
HIF1A-203ENST00000394997 A0A1W2PP64 1363 aa13.76□□□□□ -0.21
HIF1A-203ENST00000394997 FMN2Q9NZ56 1722 aa13.76□□□□□ -0.21
HIF1A-203ENST00000394997 CPSF1Q10570 1443 aaKnown RBP13.75□□□□□ -0.21
HIF1A-203ENST00000394997 TMEM132EQ6IEE7 984 aa13.75□□□□□ -0.21
HIF1A-203ENST00000394997 EIF5BO60841 1220 aaKnown RBP13.75□□□□□ -0.21
HIF1A-203ENST00000394997 GGT6Q6P531 493 aa13.73□□□□□ -0.21
HIF1A-203ENST00000394997 FER1L4A9Z1Z3 1794 aa13.73□□□□□ -0.21
HIF1A-203ENST00000394997 SLFN5Q08AF3 891 aa13.73□□□□□ -0.21
HIF1A-203ENST00000394997 FBXO31Q5XUX0 539 aaPredicted RBP13.73□□□□□ -0.21
HIF1A-203ENST00000394997 PLPPR3Q6T4P5 718 aa13.72□□□□□ -0.21
HIF1A-203ENST00000394997 SLIT1O75093 1534 aa13.72□□□□□ -0.21
HIF1A-203ENST00000394997 LRRC7Q96NW7 1537 aa13.72□□□□□ -0.21
HIF1A-203ENST00000394997 C20orf194Q5TEA3 1177 aa13.72□□□□□ -0.21
HIF1A-203ENST00000394997 NPM2Q86SE8 214 aaKnown RBP13.72□□□□□ -0.21
HIF1A-203ENST00000394997 SLC52A1Q9NWF4 448 aa13.72□□□□□ -0.21
HIF1A-203ENST00000394997 ATP7BP35670 1465 aa13.72□□□□□ -0.21
HIF1A-203ENST00000394997 ADAMTS13Q76LX8 1427 aa13.72□□□□□ -0.21
HIF1A-203ENST00000394997 DEKP35659 375 aaKnown RBP13.72□□□□□ -0.21
HIF1A-203ENST00000394997 NSD2O96028 1365 aa13.72□□□□□ -0.21
HIF1A-203ENST00000394997 NKTRP30414 1462 aaKnown RBP13.71□□□□□ -0.21
HIF1A-203ENST00000394997 ARHGAP23Q9P227 1491 aa13.71□□□□□ -0.21
HIF1A-203ENST00000394997 SLC12A5Q9H2X9 1139 aa13.71□□□□□ -0.21
HIF1A-203ENST00000394997 NINLQ9Y2I6 1382 aa13.71□□□□□ -0.21
HIF1A-203ENST00000394997 EXOC6Q8TAG9 804 aa13.71□□□□□ -0.22
HIF1A-203ENST00000394997 RCAN3Q9UKA8 241 aa13.71□□□□□ -0.22
HIF1A-203ENST00000394997 ZNF142P52746 1687 aaPredicted RBP13.7□□□□□ -0.22
HIF1A-203ENST00000394997 CDCA8Q53HL2 280 aa13.7□□□□□ -0.22
HIF1A-203ENST00000394997 NPM1P06748 294 aaKnown RBP eCLIP13.7□□□□□ -0.22
HIF1A-203ENST00000394997 PLEKHF1Q96S99 279 aa13.69□□□□□ -0.22
HIF1A-203ENST00000394997 PPP6R1Q9UPN7 881 aa13.69□□□□□ -0.22
HIF1A-203ENST00000394997 NCBP3Q53F19 620 aaKnown RBP13.68□□□□□ -0.22
HIF1A-203ENST00000394997 TRAK1Q9UPV9 953 aa13.68□□□□□ -0.22
HIF1A-203ENST00000394997 CYB5RLQ6IPT4 315 aa13.67□□□□□ -0.22
HIF1A-203ENST00000394997 KNSTRNQ9Y448 316 aa13.67□□□□□ -0.22
HIF1A-203ENST00000394997 METP08581 1390 aa13.67□□□□□ -0.22
HIF1A-203ENST00000394997 RIMS2Q9UQ26 1411 aa13.67□□□□□ -0.22
HIF1A-203ENST00000394997 TRHP20396 242 aaPredicted RBP13.67□□□□□ -0.22
HIF1A-203ENST00000394997 N4BP2Q86UW6 1770 aaPredicted RBP13.66□□□□□ -0.22
HIF1A-203ENST00000394997 PIK3C2AO00443 1686 aa13.66□□□□□ -0.22
HIF1A-203ENST00000394997 LRRC37A3O60309 1634 aa13.66□□□□□ -0.22
HIF1A-203ENST00000394997 FAM135BQ49AJ0 1406 aa13.65□□□□□ -0.22
HIF1A-203ENST00000394997 SSH2Q76I76 1423 aa13.65□□□□□ -0.22
HIF1A-203ENST00000394997 PTPRUQ92729 1446 aa13.65□□□□□ -0.22
HIF1A-203ENST00000394997 ANP32AP39687 249 aaKnown RBP13.65□□□□□ -0.22
HIF1A-203ENST00000394997 SLC24A1O60721 1099 aa13.65□□□□□ -0.22
HIF1A-203ENST00000394997 CHD2O14647 1828 aaKnown RBP13.64□□□□□ -0.23
HIF1A-203ENST00000394997 VGFO15240 615 aaPredicted RBP13.64□□□□□ -0.23
HIF1A-203ENST00000394997 FAM69CQ0P6D2 419 aa13.64□□□□□ -0.23
HIF1A-203ENST00000394997 PLIN1O60240 522 aa13.63□□□□□ -0.23
HIF1A-203ENST00000394997 TUBGCP6Q96RT7 1819 aa13.63□□□□□ -0.23
HIF1A-203ENST00000394997 NUTM2DQ5VT03 806 aaPredicted RBP13.62□□□□□ -0.23
HIF1A-203ENST00000394997 DAXXQ9UER7 740 aaPredicted RBP13.62□□□□□ -0.23
HIF1A-203ENST00000394997 PRKCSHP14314 528 aaPredicted RBP13.62□□□□□ -0.23
HIF1A-203ENST00000394997 CCDC27Q2M243 656 aa13.62□□□□□ -0.23
HIF1A-203ENST00000394997 ZMYM3Q14202 1370 aa13.62□□□□□ -0.23
HIF1A-203ENST00000394997 DIP2AQ14689 1571 aa13.61□□□□□ -0.23
HIF1A-203ENST00000394997 WWC1Q8IX03 1113 aa13.6□□□□□ -0.23
HIF1A-203ENST00000394997 CCDC136Q96JN2 1154 aa13.6□□□□□ -0.23
HIF1A-203ENST00000394997 PHRF1Q9P1Y6 1649 aaKnown RBP13.6□□□□□ -0.23
HIF1A-203ENST00000394997 ADAMTSL3P82987 1691 aa13.59□□□□□ -0.23
HIF1A-203ENST00000394997 PPIP5K1Q6PFW1 1433 aa13.59□□□□□ -0.23
HIF1A-203ENST00000394997 CRBNQ96SW2 442 aa13.59□□□□□ -0.23
HIF1A-203ENST00000394997 FYB1O15117 783 aa13.59□□□□□ -0.23
HIF1A-203ENST00000394997 CABP2Q9NPB3 220 aa13.59□□□□□ -0.23
HIF1A-203ENST00000394997 NWD1Q149M9 1564 aa13.59□□□□□ -0.23
HIF1A-203ENST00000394997 SKAP1Q86WV1 359 aa13.58□□□□□ -0.23
HIF1A-203ENST00000394997 CCDC146Q8IYE0 955 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms