RNA–Protein interactions for RNA: ENST00000394829.6

PPP3CB-204, Transcript of protein phosphatase 3 catalytic subunit beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP3CB, Length 3,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CB-204ENST00000394829 SLC4A3P48751 1232 aa16.24■□□□□ 0.19
PPP3CB-204ENST00000394829 ABCC3O15438 1527 aa16.24■□□□□ 0.19
PPP3CB-204ENST00000394829 NOS1P29475 1434 aa16.24■□□□□ 0.19
PPP3CB-204ENST00000394829 FAM161AQ3B820 660 aa16.23■□□□□ 0.19
PPP3CB-204ENST00000394829 CAMSAP1Q5T5Y3 1602 aa16.23■□□□□ 0.19
PPP3CB-204ENST00000394829 MYO3AQ8NEV4 1616 aa16.23■□□□□ 0.19
PPP3CB-204ENST00000394829 NRXN1Q9ULB1 1477 aa16.23■□□□□ 0.19
PPP3CB-204ENST00000394829 TRAK1Q9UPV9 953 aa16.23■□□□□ 0.19
PPP3CB-204ENST00000394829 SIGLEC1Q9BZZ2 1709 aa16.22■□□□□ 0.19
PPP3CB-204ENST00000394829 TNNT2P45379 298 aaPredicted RBP16.22■□□□□ 0.19
PPP3CB-204ENST00000394829 CENPJQ9HC77 1338 aaPredicted RBP16.22■□□□□ 0.19
PPP3CB-204ENST00000394829 PPM1GO15355 546 aaPredicted RBP16.21■□□□□ 0.19
PPP3CB-204ENST00000394829 POLR3AO14802 1390 aaPredicted RBP16.21■□□□□ 0.19
PPP3CB-204ENST00000394829 WWC1Q8IX03 1113 aa16.21■□□□□ 0.18
PPP3CB-204ENST00000394829 USP35Q9P2H5 1018 aa16.21■□□□□ 0.18
PPP3CB-204ENST00000394829 ZC3H13Q5T200 1668 aaKnown RBP16.2■□□□□ 0.18
PPP3CB-204ENST00000394829 GGT6Q6P531 493 aa16.2■□□□□ 0.18
PPP3CB-204ENST00000394829 SLC12A5Q9H2X9 1139 aa16.2■□□□□ 0.18
PPP3CB-204ENST00000394829 NSD3Q9BZ95 1437 aa16.2■□□□□ 0.18
PPP3CB-204ENST00000394829 SBNO2Q9Y2G9 1366 aa16.2■□□□□ 0.18
PPP3CB-204ENST00000394829 NPATQ14207 1427 aa16.2■□□□□ 0.18
PPP3CB-204ENST00000394829 SHPRHQ149N8 1683 aa16.2■□□□□ 0.18
PPP3CB-204ENST00000394829 IGHDP01880 384 aa16.19■□□□□ 0.18
PPP3CB-204ENST00000394829 NEUROD2Q15784 382 aa16.19■□□□□ 0.18
PPP3CB-204ENST00000394829 ADGRB3O60242 1522 aa16.19■□□□□ 0.18
PPP3CB-204ENST00000394829 TMEM132EQ6IEE7 984 aa16.19■□□□□ 0.18
PPP3CB-204ENST00000394829 REREQ9P2R6 1566 aa16.19■□□□□ 0.18
PPP3CB-204ENST00000394829 MORC1Q86VD1 984 aa16.19■□□□□ 0.18
PPP3CB-204ENST00000394829 EIF5BO60841 1220 aaKnown RBP16.18■□□□□ 0.18
PPP3CB-204ENST00000394829 RRP7AQ9Y3A4 280 aaKnown RBP16.18■□□□□ 0.18
PPP3CB-204ENST00000394829 QRICH2Q9H0J4 1663 aa16.18■□□□□ 0.18
PPP3CB-204ENST00000394829 SETBP1Q9Y6X0 1596 aa16.17■□□□□ 0.18
PPP3CB-204ENST00000394829 PPLO60437 1756 aa16.17■□□□□ 0.18
PPP3CB-204ENST00000394829 PANK1Q8TE04 598 aa16.17■□□□□ 0.18
PPP3CB-204ENST00000394829 NGEFQ8N5V2 710 aa16.17■□□□□ 0.18
PPP3CB-204ENST00000394829 COG6Q9Y2V7 657 aa16.16■□□□□ 0.18
PPP3CB-204ENST00000394829 C14orf93Q9H972 538 aaKnown RBP16.16■□□□□ 0.18
PPP3CB-204ENST00000394829 CANXP27824 592 aaKnown RBP16.15■□□□□ 0.18
PPP3CB-204ENST00000394829 ARHGEF40Q8TER5 1519 aa16.15■□□□□ 0.18
PPP3CB-204ENST00000394829 PDE3AQ14432 1141 aa16.14■□□□□ 0.18
PPP3CB-204ENST00000394829 ADGRB1O14514 1584 aa16.14■□□□□ 0.17
PPP3CB-204ENST00000394829 TCP11L2Q8N4U5 519 aa16.14■□□□□ 0.17
PPP3CB-204ENST00000394829 FRAT1Q92837 279 aaPredicted RBP16.14■□□□□ 0.17
PPP3CB-204ENST00000394829 DAXXQ9UER7 740 aaPredicted RBP16.14■□□□□ 0.17
PPP3CB-204ENST00000394829 CGNL1Q0VF96 1302 aa16.14■□□□□ 0.17
PPP3CB-204ENST00000394829 CLUAP1Q96AJ1 413 aa16.13■□□□□ 0.17
PPP3CB-204ENST00000394829 RUNDC1Q96C34 613 aa16.13■□□□□ 0.17
PPP3CB-204ENST00000394829 AGLP35573 1532 aa16.13■□□□□ 0.17
PPP3CB-204ENST00000394829 PIK3C2BO00750 1634 aa16.13■□□□□ 0.17
PPP3CB-204ENST00000394829 NFKBIBQ15653 356 aa16.12■□□□□ 0.17
PPP3CB-204ENST00000394829 NUTM2DQ5VT03 806 aaPredicted RBP16.12■□□□□ 0.17
PPP3CB-204ENST00000394829 MTHFSP49914 203 aa16.12■□□□□ 0.17
PPP3CB-204ENST00000394829 VIRMAQ69YN4 1812 aaKnown RBP16.12■□□□□ 0.17
PPP3CB-204ENST00000394829 IQSEC2Q5JU85 1478 aa16.11■□□□□ 0.17
PPP3CB-204ENST00000394829 ARHGAP31Q2M1Z3 1444 aa16.11■□□□□ 0.17
PPP3CB-204ENST00000394829 RARSP54136 660 aaKnown RBP16.1■□□□□ 0.17
PPP3CB-204ENST00000394829 TNNQ9UQP3 1299 aa16.1■□□□□ 0.17
PPP3CB-204ENST00000394829 PREX1Q8TCU6 1659 aa16.1■□□□□ 0.17
PPP3CB-204ENST00000394829 PHF23Q9BUL5 403 aaPredicted RBP16.09■□□□□ 0.17
PPP3CB-204ENST00000394829 BCL2L13Q9BXK5 485 aa16.09■□□□□ 0.17
PPP3CB-204ENST00000394829 NINLQ9Y2I6 1382 aa16.09■□□□□ 0.17
PPP3CB-204ENST00000394829 RLBP1P12271 317 aa16.08■□□□□ 0.16
PPP3CB-204ENST00000394829 CLTCQ00610 1675 aaKnown RBP16.08■□□□□ 0.16
PPP3CB-204ENST00000394829 USP32Q8NFA0 1604 aa16.07■□□□□ 0.16
PPP3CB-204ENST00000394829 SEC24BO95487 1268 aa16.07■□□□□ 0.16
PPP3CB-204ENST00000394829 USP19O94966 1318 aa16.07■□□□□ 0.16
PPP3CB-204ENST00000394829 WDR63Q8IWG1 891 aa16.06■□□□□ 0.16
PPP3CB-204ENST00000394829 SENP3Q9H4L4 574 aaPredicted RBP16.06■□□□□ 0.16
PPP3CB-204ENST00000394829 PCDHB15Q9Y5E8 787 aa16.05■□□□□ 0.16
PPP3CB-204ENST00000394829 RPGRIP1LQ68CZ1 1315 aa16.05■□□□□ 0.16
PPP3CB-204ENST00000394829 TULP4Q9NRJ4 1543 aa16.05■□□□□ 0.16
PPP3CB-204ENST00000394829 ARHGEF28Q8N1W1 1705 aaKnown RBP16.05■□□□□ 0.16
PPP3CB-204ENST00000394829 CFAP53Q96M91 514 aa16.05■□□□□ 0.16
PPP3CB-204ENST00000394829 CABP2Q9NPB3 220 aa16.05■□□□□ 0.16
PPP3CB-204ENST00000394829 SAFB2Q14151 953 aaKnown RBP eCLIP16.05■□□□□ 0.16
PPP3CB-204ENST00000394829 MYO5BQ9ULV0 1848 aa16.04■□□□□ 0.16
PPP3CB-204ENST00000394829 EVC2Q86UK5 1308 aa16.04■□□□□ 0.16
PPP3CB-204ENST00000394829 MAPK8IP3Q9UPT6 1336 aa16.04■□□□□ 0.16
PPP3CB-204ENST00000394829 U2AF1L5P0DN76 240 aaPredicted RBP16.03■□□□□ 0.16
PPP3CB-204ENST00000394829 U2AF1Q01081 240 aaKnown RBP eCLIP16.03■□□□□ 0.16
PPP3CB-204ENST00000394829 GSE1Q14687 1217 aa16.03■□□□□ 0.16
PPP3CB-204ENST00000394829 CCDC27Q2M243 656 aa16.03■□□□□ 0.16
PPP3CB-204ENST00000394829 BRPF3Q9ULD4 1205 aa16.03■□□□□ 0.16
PPP3CB-204ENST00000394829 ANKRD36BQ8N2N9 1353 aa16.03■□□□□ 0.16
PPP3CB-204ENST00000394829 FRAT2O75474 233 aaPredicted RBP16.02■□□□□ 0.15
PPP3CB-204ENST00000394829 NEXMIFQ5QGS0 1516 aa16.01■□□□□ 0.15
PPP3CB-204ENST00000394829 PMFBP1Q8TBY8 1022 aa16.01■□□□□ 0.15
PPP3CB-204ENST00000394829 VGFO15240 615 aaPredicted RBP16■□□□□ 0.15
PPP3CB-204ENST00000394829 TMEM131LA2VDJ0 1609 aa15.99■□□□□ 0.15
PPP3CB-204ENST00000394829 STK26Q9P289 416 aa15.99■□□□□ 0.15
PPP3CB-204ENST00000394829 PDZRN3Q9UPQ7 1066 aa15.99■□□□□ 0.15
PPP3CB-204ENST00000394829 TSR2Q969E8 191 aaKnown RBP15.99■□□□□ 0.15
PPP3CB-204ENST00000394829 MYH16Q9H6N6 1097 aa15.99■□□□□ 0.15
PPP3CB-204ENST00000394829 NLRP1Q9C000 1473 aa15.98■□□□□ 0.15
PPP3CB-204ENST00000394829 PUS7Q96PZ0 661 aaKnown RBP15.98■□□□□ 0.15
PPP3CB-204ENST00000394829 NSD2O96028 1365 aa15.98■□□□□ 0.15
PPP3CB-204ENST00000394829 ADGRB2O60241 1585 aa15.98■□□□□ 0.15
PPP3CB-204ENST00000394829 IDI1Q13907 227 aa15.97■□□□□ 0.15
PPP3CB-204ENST00000394829 GGNBP2Q9H3C7 697 aa15.97■□□□□ 0.15
PPP3CB-204ENST00000394829 PPP6R1Q9UPN7 881 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms