RNA–Protein interactions for RNA: ENST00000394366.6

SRSF5-201, Transcript of serine and arginine rich splicing factor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF5, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF5-201ENST00000394366 CDCA8Q53HL2 280 aa18.35■□□□□ 0.53
SRSF5-201ENST00000394366 C19orf44Q9H6X5 657 aa18.35■□□□□ 0.53
SRSF5-201ENST00000394366 XRN1Q8IZH2 1706 aaKnown RBP18.35■□□□□ 0.53
SRSF5-201ENST00000394366 CFAP70Q5T0N1 1121 aa18.34■□□□□ 0.53
SRSF5-201ENST00000394366 POLR3GLQ9BT43 218 aa18.34■□□□□ 0.53
SRSF5-201ENST00000394366 C14orf93Q9H972 538 aaKnown RBP18.34■□□□□ 0.53
SRSF5-201ENST00000394366 HSPA1LP34931 641 aa18.33■□□□□ 0.52
SRSF5-201ENST00000394366 SETD1AO15047 1707 aaKnown RBP18.33■□□□□ 0.52
SRSF5-201ENST00000394366 ATF3P18847 181 aa18.32■□□□□ 0.52
SRSF5-201ENST00000394366 PRKRIP1Q9H875 184 aaPredicted RBP18.32■□□□□ 0.52
SRSF5-201ENST00000394366 CADPS2Q86UW7 1296 aa18.31■□□□□ 0.52
SRSF5-201ENST00000394366 KTN1Q86UP2 1357 aaKnown RBP18.31■□□□□ 0.52
SRSF5-201ENST00000394366 TMEM132EQ6IEE7 984 aa18.31■□□□□ 0.52
SRSF5-201ENST00000394366 SLAIN2Q9P270 581 aa18.31■□□□□ 0.52
SRSF5-201ENST00000394366 PTCH1Q13635 1447 aa18.3■□□□□ 0.52
SRSF5-201ENST00000394366 ROBO2Q9HCK4 1378 aa18.3■□□□□ 0.52
SRSF5-201ENST00000394366 DISP3Q9P2K9 1392 aa18.3■□□□□ 0.52
SRSF5-201ENST00000394366 SBNO2Q9Y2G9 1366 aa18.3■□□□□ 0.52
SRSF5-201ENST00000394366 STK26Q9P289 416 aa18.3■□□□□ 0.52
SRSF5-201ENST00000394366 FAM135BQ49AJ0 1406 aa18.29■□□□□ 0.52
SRSF5-201ENST00000394366 ADGRB1O14514 1584 aa18.29■□□□□ 0.52
SRSF5-201ENST00000394366 LRPPRCP42704 1394 aaKnown RBP18.28■□□□□ 0.52
SRSF5-201ENST00000394366 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.26■□□□□ 0.51
SRSF5-201ENST00000394366 ABCC11Q96J66 1382 aa18.25■□□□□ 0.51
SRSF5-201ENST00000394366 DCCP43146 1447 aa18.25■□□□□ 0.51
SRSF5-201ENST00000394366 ADGRL3Q9HAR2 1447 aa18.25■□□□□ 0.51
SRSF5-201ENST00000394366 ASXL1Q8IXJ9 1541 aa18.25■□□□□ 0.51
SRSF5-201ENST00000394366 YTHDC2Q9H6S0 1430 aaKnown RBP18.25■□□□□ 0.51
SRSF5-201ENST00000394366 TECPR2O15040 1411 aa18.23■□□□□ 0.51
SRSF5-201ENST00000394366 CENPJQ9HC77 1338 aaPredicted RBP18.23■□□□□ 0.51
SRSF5-201ENST00000394366 WAPLQ7Z5K2 1190 aa18.22■□□□□ 0.51
SRSF5-201ENST00000394366 ROBO1Q9Y6N7 1651 aa18.21■□□□□ 0.51
SRSF5-201ENST00000394366 RALBP1Q15311 655 aa18.2■□□□□ 0.5
SRSF5-201ENST00000394366 SIRT1Q96EB6 747 aa18.2■□□□□ 0.5
SRSF5-201ENST00000394366 QRICH2Q9H0J4 1663 aa18.2■□□□□ 0.5
SRSF5-201ENST00000394366 MST1RQ04912 1400 aa18.19■□□□□ 0.5
SRSF5-201ENST00000394366 NALCNQ8IZF0 1738 aa18.19■□□□□ 0.5
SRSF5-201ENST00000394366 ARHGEF28Q8N1W1 1705 aaKnown RBP18.19■□□□□ 0.5
SRSF5-201ENST00000394366 PLEKHH1Q9ULM0 1364 aa18.18■□□□□ 0.5
SRSF5-201ENST00000394366 BRINP3Q76B58 766 aa18.17■□□□□ 0.5
SRSF5-201ENST00000394366 KNDC1Q76NI1 1749 aa18.17■□□□□ 0.5
SRSF5-201ENST00000394366 TRAK1Q9UPV9 953 aa18.16■□□□□ 0.5
SRSF5-201ENST00000394366 MYOM1P52179 1685 aa18.16■□□□□ 0.5
SRSF5-201ENST00000394366 PER1O15534 1290 aaPredicted RBP18.16■□□□□ 0.5
SRSF5-201ENST00000394366 PUS7Q96PZ0 661 aaKnown RBP18.16■□□□□ 0.5
SRSF5-201ENST00000394366 PRAM1Q96QH2 718 aa18.16■□□□□ 0.5
SRSF5-201ENST00000394366 MRS2Q9HD23 443 aa18.16■□□□□ 0.5
SRSF5-201ENST00000394366 POGKQ9P215 609 aa18.16■□□□□ 0.5
SRSF5-201ENST00000394366 PANK3Q9H999 370 aa18.15■□□□□ 0.5
SRSF5-201ENST00000394366 MYBBP1AQ9BQG0 1328 aaKnown RBP18.14■□□□□ 0.49
SRSF5-201ENST00000394366 SAFB2Q14151 953 aaKnown RBP eCLIP18.13■□□□□ 0.49
SRSF5-201ENST00000394366 PARD3Q8TEW0 1356 aa18.13■□□□□ 0.49
SRSF5-201ENST00000394366 C1orf167Q5SNV9 1468 aa18.13■□□□□ 0.49
SRSF5-201ENST00000394366 DLC1Q96QB1 1528 aa18.13■□□□□ 0.49
SRSF5-201ENST00000394366 BRD4O60885 1362 aaPredicted RBP18.11■□□□□ 0.49
SRSF5-201ENST00000394366 CDC42BPGQ6DT37 1551 aa18.11■□□□□ 0.49
SRSF5-201ENST00000394366 NPC1L1Q9UHC9 1359 aa18.1■□□□□ 0.49
SRSF5-201ENST00000394366 ORAI2Q96SN7 254 aa18.1■□□□□ 0.49
SRSF5-201ENST00000394366 KNSTRNQ9Y448 316 aa18.1■□□□□ 0.49
SRSF5-201ENST00000394366 PHLPP1O60346 1717 aa18.1■□□□□ 0.49
SRSF5-201ENST00000394366 EVC2Q86UK5 1308 aa18.1■□□□□ 0.49
SRSF5-201ENST00000394366 NUTM2FA1L443 756 aa18.09■□□□□ 0.49
SRSF5-201ENST00000394366 AHDC1Q5TGY3 1603 aaPredicted RBP18.09■□□□□ 0.49
SRSF5-201ENST00000394366 ESCO1Q5FWF5 840 aa18.08■□□□□ 0.48
SRSF5-201ENST00000394366 JCADQ9P266 1359 aa18.07■□□□□ 0.48
SRSF5-201ENST00000394366 NLRP13Q86W25 1043 aa18.07■□□□□ 0.48
SRSF5-201ENST00000394366 DDX17Q92841 729 aaKnown RBP18.06■□□□□ 0.48
SRSF5-201ENST00000394366 COL16A1Q07092 1604 aaPredicted RBP18.06■□□□□ 0.48
SRSF5-201ENST00000394366 CCDC184Q52MB2 194 aa18.05■□□□□ 0.48
SRSF5-201ENST00000394366 TMC1Q8TDI8 760 aa18.05■□□□□ 0.48
SRSF5-201ENST00000394366 MINK1Q8N4C8 1332 aaPredicted RBP18.05■□□□□ 0.48
SRSF5-201ENST00000394366 NINLQ9Y2I6 1382 aa18.05■□□□□ 0.48
SRSF5-201ENST00000394366 TULP4Q9NRJ4 1543 aa18.05■□□□□ 0.48
SRSF5-201ENST00000394366 MED1Q15648 1581 aaPredicted RBP18.05■□□□□ 0.48
SRSF5-201ENST00000394366 LRRC59Q96AG4 307 aaKnown RBP18.03■□□□□ 0.48
SRSF5-201ENST00000394366 FAM9BQ8IZU0 186 aa18.02■□□□□ 0.48
SRSF5-201ENST00000394366 NHSL1Q5SYE7 1610 aa18.02■□□□□ 0.48
SRSF5-201ENST00000394366 HNRNPUQ00839 825 aaKnown RBP eCLIP18.01■□□□□ 0.47
SRSF5-201ENST00000394366 CNGB1Q14028 1251 aaPredicted RBP18.01■□□□□ 0.47
SRSF5-201ENST00000394366 FMN2Q9NZ56 1722 aa18.01■□□□□ 0.47
SRSF5-201ENST00000394366 AMER1Q5JTC6 1135 aaPredicted RBP18.01■□□□□ 0.47
SRSF5-201ENST00000394366 CC2D1BQ5T0F9 858 aaKnown RBP18.01■□□□□ 0.47
SRSF5-201ENST00000394366 ATAD2Q6PL18 1390 aa18.01■□□□□ 0.47
SRSF5-201ENST00000394366 NPHP3Q7Z494 1330 aa18.01■□□□□ 0.47
SRSF5-201ENST00000394366 PHF23Q9BUL5 403 aaPredicted RBP18.01■□□□□ 0.47
SRSF5-201ENST00000394366 SOS2Q07890 1332 aaPredicted RBP18■□□□□ 0.47
SRSF5-201ENST00000394366 WASLO00401 505 aaPredicted RBP18■□□□□ 0.47
SRSF5-201ENST00000394366 FOXO3O43524 673 aa18■□□□□ 0.47
SRSF5-201ENST00000394366 USP32Q8NFA0 1604 aa17.99■□□□□ 0.47
SRSF5-201ENST00000394366 ADGRB2O60241 1585 aa17.99■□□□□ 0.47
SRSF5-201ENST00000394366 SPATA31A6Q5VVP1 1343 aa17.99■□□□□ 0.47
SRSF5-201ENST00000394366 PNISRQ8TF01 805 aaKnown RBP17.98■□□□□ 0.47
SRSF5-201ENST00000394366 GTF3C3Q9Y5Q9 886 aa17.98■□□□□ 0.47
SRSF5-201ENST00000394366 PHF8Q9UPP1 1060 aa17.98■□□□□ 0.47
SRSF5-201ENST00000394366 ANKARQ7Z5J8 1434 aa17.97■□□□□ 0.47
SRSF5-201ENST00000394366 INSRP06213 1382 aa17.97■□□□□ 0.47
SRSF5-201ENST00000394366 ANKRD36BQ8N2N9 1353 aa17.96■□□□□ 0.47
SRSF5-201ENST00000394366 ZBED9Q6R2W3 1325 aa17.95■□□□□ 0.46
SRSF5-201ENST00000394366 XPCQ01831 940 aaPredicted RBP17.95■□□□□ 0.46
SRSF5-201ENST00000394366 SRPK2P78362 688 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms