RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 MYBBP1AQ9BQG0 1328 aaKnown RBP23.84■■□□□ 1.41
MBD4-202ENST00000393278 SIRT1Q96EB6 747 aa23.84■■□□□ 1.41
MBD4-202ENST00000393278 FAM135BQ49AJ0 1406 aa23.84■■□□□ 1.41
MBD4-202ENST00000393278 MINK1Q8N4C8 1332 aaPredicted RBP23.83■■□□□ 1.41
MBD4-202ENST00000393278 DIP2AQ14689 1571 aa23.82■■□□□ 1.4
MBD4-202ENST00000393278 PLEKHH1Q9ULM0 1364 aa23.82■■□□□ 1.4
MBD4-202ENST00000393278 AMER1Q5JTC6 1135 aaPredicted RBP23.82■■□□□ 1.4
MBD4-202ENST00000393278 NPC1L1Q9UHC9 1359 aa23.81■■□□□ 1.4
MBD4-202ENST00000393278 CC2D1BQ5T0F9 858 aaKnown RBP23.81■■□□□ 1.4
MBD4-202ENST00000393278 WAPLQ7Z5K2 1190 aa23.81■■□□□ 1.4
MBD4-202ENST00000393278 CABP2Q9NPB3 220 aa23.8■■□□□ 1.4
MBD4-202ENST00000393278 TBX22Q9Y458 520 aa23.8■■□□□ 1.4
MBD4-202ENST00000393278 SLC12A5Q9H2X9 1139 aa23.79■■□□□ 1.4
MBD4-202ENST00000393278 TMC1Q8TDI8 760 aa23.79■■□□□ 1.4
MBD4-202ENST00000393278 SLC26A8Q96RN1 970 aa23.79■■□□□ 1.4
MBD4-202ENST00000393278 BRD4O60885 1362 aaPredicted RBP23.79■■□□□ 1.4
MBD4-202ENST00000393278 ATAD2Q6PL18 1390 aa23.79■■□□□ 1.4
MBD4-202ENST00000393278 NINLQ9Y2I6 1382 aa23.79■■□□□ 1.4
MBD4-202ENST00000393278 SRPK2P78362 688 aaKnown RBP23.78■■□□□ 1.4
MBD4-202ENST00000393278 CARD14Q9BXL6 1004 aa23.78■■□□□ 1.4
MBD4-202ENST00000393278 PTPRUQ92729 1446 aa23.76■■□□□ 1.39
MBD4-202ENST00000393278 NLRP13Q86W25 1043 aa23.76■■□□□ 1.39
MBD4-202ENST00000393278 ROBO2Q9HCK4 1378 aa23.75■■□□□ 1.39
MBD4-202ENST00000393278 CDK19Q9BWU1 502 aa23.75■■□□□ 1.39
MBD4-202ENST00000393278 ANKRD36BQ8N2N9 1353 aa23.74■■□□□ 1.39
MBD4-202ENST00000393278 ANKLE2Q86XL3 938 aa23.73■■□□□ 1.39
MBD4-202ENST00000393278 NSD3Q9BZ95 1437 aa23.73■■□□□ 1.39
MBD4-202ENST00000393278 FAM9BQ8IZU0 186 aa23.72■■□□□ 1.39
MBD4-202ENST00000393278 USP32Q8NFA0 1604 aa23.71■■□□□ 1.39
MBD4-202ENST00000393278 PIK3R4Q99570 1358 aa23.69■■□□□ 1.38
MBD4-202ENST00000393278 PTCH1Q13635 1447 aa23.69■■□□□ 1.38
MBD4-202ENST00000393278 WASLO00401 505 aaPredicted RBP23.69■■□□□ 1.38
MBD4-202ENST00000393278 AEBP2Q6ZN18 517 aaPredicted RBP23.69■■□□□ 1.38
MBD4-202ENST00000393278 AMOTL2Q9Y2J4 779 aa23.69■■□□□ 1.38
MBD4-202ENST00000393278 ADGRB2O60241 1585 aa23.68■■□□□ 1.38
MBD4-202ENST00000393278 PNISRQ8TF01 805 aaKnown RBP23.68■■□□□ 1.38
MBD4-202ENST00000393278 XRN1Q8IZH2 1706 aaKnown RBP23.68■■□□□ 1.38
MBD4-202ENST00000393278 A0A1W2PP64 1363 aa23.66■■□□□ 1.38
MBD4-202ENST00000393278 CD163L1Q9NR16 1453 aa23.65■■□□□ 1.38
MBD4-202ENST00000393278 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.65■■□□□ 1.38
MBD4-202ENST00000393278 HNRNPUQ00839 825 aaKnown RBP eCLIP23.65■■□□□ 1.38
MBD4-202ENST00000393278 PPP2R1AP30153 589 aa23.64■■□□□ 1.38
MBD4-202ENST00000393278 TERF2IPQ9NYB0 399 aa23.64■■□□□ 1.37
MBD4-202ENST00000393278 CGNL1Q0VF96 1302 aa23.63■■□□□ 1.37
MBD4-202ENST00000393278 ATP7BP35670 1465 aa23.61■■□□□ 1.37
MBD4-202ENST00000393278 NPHP4O75161 1426 aaPredicted RBP23.61■■□□□ 1.37
MBD4-202ENST00000393278 CABP1Q9NZU7 370 aa23.61■■□□□ 1.37
MBD4-202ENST00000393278 NSD2O96028 1365 aa23.6■■□□□ 1.37
MBD4-202ENST00000393278 HDGFL2Q7Z4V5 671 aaPredicted RBP23.59■■□□□ 1.37
MBD4-202ENST00000393278 CHD2O14647 1828 aaKnown RBP23.57■■□□□ 1.36
MBD4-202ENST00000393278 KCNA6P17658 529 aa23.57■■□□□ 1.36
MBD4-202ENST00000393278 NUDT16Q96DE0 195 aaKnown RBP23.57■■□□□ 1.36
MBD4-202ENST00000393278 PPIP5K1Q6PFW1 1433 aa23.57■■□□□ 1.36
MBD4-202ENST00000393278 CCDC61Q9Y6R9 512 aa23.56■■□□□ 1.36
MBD4-202ENST00000393278 MORC1Q86VD1 984 aa23.55■■□□□ 1.36
MBD4-202ENST00000393278 PRR36Q9H6K5 1346 aa23.54■■□□□ 1.36
MBD4-202ENST00000393278 CPSF1Q10570 1443 aaKnown RBP23.54■■□□□ 1.36
MBD4-202ENST00000393278 KDM4FA0A1W2PPD8 638 aa23.54■■□□□ 1.36
MBD4-202ENST00000393278 NCKAP5LQ9HCH0 1330 aa23.53■■□□□ 1.36
MBD4-202ENST00000393278 CDC42BPGQ6DT37 1551 aa23.53■■□□□ 1.36
MBD4-202ENST00000393278 ZBED9Q6R2W3 1325 aa23.52■■□□□ 1.36
MBD4-202ENST00000393278 INSRP06213 1382 aa23.52■■□□□ 1.36
MBD4-202ENST00000393278 TOPAZ1Q8N9V7 1692 aa23.51■■□□□ 1.35
MBD4-202ENST00000393278 ANKRD26Q9UPS8 1709 aa23.49■■□□□ 1.35
MBD4-202ENST00000393278 EDC4Q6P2E9 1401 aaKnown RBP23.48■■□□□ 1.35
MBD4-202ENST00000393278 FYB1O15117 783 aa23.48■■□□□ 1.35
MBD4-202ENST00000393278 KIF20BQ96Q89 1820 aa23.47■■□□□ 1.35
MBD4-202ENST00000393278 AKAP12Q02952 1782 aa23.47■■□□□ 1.35
MBD4-202ENST00000393278 MON2Q7Z3U7 1717 aa23.47■■□□□ 1.35
MBD4-202ENST00000393278 ITSN1Q15811 1721 aa23.46■■□□□ 1.35
MBD4-202ENST00000393278 NWD1Q149M9 1564 aa23.46■■□□□ 1.35
MBD4-202ENST00000393278 POLR3AO14802 1390 aaPredicted RBP23.45■■□□□ 1.35
MBD4-202ENST00000393278 GGNBP2Q9H3C7 697 aa23.45■■□□□ 1.34
MBD4-202ENST00000393278 SCAF1Q9H7N4 1312 aaKnown RBP23.45■■□□□ 1.34
MBD4-202ENST00000393278 PLEKHG3A1L390 1219 aa23.44■■□□□ 1.34
MBD4-202ENST00000393278 BLMP54132 1417 aaPredicted RBP23.44■■□□□ 1.34
MBD4-202ENST00000393278 TNNT2P45379 298 aaPredicted RBP23.44■■□□□ 1.34
MBD4-202ENST00000393278 ZNF692Q9BU19 519 aaPredicted RBP23.44■■□□□ 1.34
MBD4-202ENST00000393278 ANKARQ7Z5J8 1434 aa23.43■■□□□ 1.34
MBD4-202ENST00000393278 NKTRP30414 1462 aaKnown RBP23.42■■□□□ 1.34
MBD4-202ENST00000393278 NUTM2FA1L443 756 aa23.42■■□□□ 1.34
MBD4-202ENST00000393278 WDR43Q15061 677 aaKnown RBP eCLIP23.42■■□□□ 1.34
MBD4-202ENST00000393278 NALCNQ8IZF0 1738 aa23.42■■□□□ 1.34
MBD4-202ENST00000393278 GTF3C3Q9Y5Q9 886 aa23.42■■□□□ 1.34
MBD4-202ENST00000393278 FMN2Q9NZ56 1722 aa23.42■■□□□ 1.34
MBD4-202ENST00000393278 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.41■■□□□ 1.34
MBD4-202ENST00000393278 ADAMTS8Q9UP79 889 aa23.41■■□□□ 1.34
MBD4-202ENST00000393278 LMTK3Q96Q04 1460 aa23.39■■□□□ 1.34
MBD4-202ENST00000393278 ADGRL3Q9HAR2 1447 aa23.39■■□□□ 1.33
MBD4-202ENST00000393278 ACEP12821 1306 aa23.39■■□□□ 1.33
MBD4-202ENST00000393278 MTHFSP49914 203 aa23.38■■□□□ 1.33
MBD4-202ENST00000393278 NRKQ7Z2Y5 1582 aa23.38■■□□□ 1.33
MBD4-202ENST00000393278 HSPA2P54652 639 aa23.37■■□□□ 1.33
MBD4-202ENST00000393278 USP6P35125 1406 aa23.36■■□□□ 1.33
MBD4-202ENST00000393278 RGPD8O14715 1765 aaPredicted RBP23.36■■□□□ 1.33
MBD4-202ENST00000393278 CFAP53Q96M91 514 aa23.35■■□□□ 1.33
MBD4-202ENST00000393278 SHPRHQ149N8 1683 aa23.34■■□□□ 1.33
MBD4-202ENST00000393278 NME9Q86XW9 330 aa23.34■■□□□ 1.33
MBD4-202ENST00000393278 RBM33Q96EV2 1170 aaKnown RBP23.33■■□□□ 1.33
MBD4-202ENST00000393278 TTC21BQ7Z4L5 1316 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms