RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 USP32Q8NFA0 1604 aa15.52■□□□□ 0.07
SMARCAL1-203ENST00000392128 TECPR2O15040 1411 aa15.51■□□□□ 0.07
SMARCAL1-203ENST00000392128 ADAMTS13Q76LX8 1427 aa15.51■□□□□ 0.07
SMARCAL1-203ENST00000392128 NINLQ9Y2I6 1382 aa15.51■□□□□ 0.07
SMARCAL1-203ENST00000392128 CPS1P31327 1500 aa15.5■□□□□ 0.07
SMARCAL1-203ENST00000392128 CEP170BQ9Y4F5 1589 aaPredicted RBP15.5■□□□□ 0.07
SMARCAL1-203ENST00000392128 SAFB2Q14151 953 aaKnown RBP eCLIP15.5■□□□□ 0.07
SMARCAL1-203ENST00000392128 LTKP29376 864 aa15.49■□□□□ 0.07
SMARCAL1-203ENST00000392128 CARD14Q9BXL6 1004 aa15.49■□□□□ 0.07
SMARCAL1-203ENST00000392128 MED14O60244 1454 aa15.49■□□□□ 0.07
SMARCAL1-203ENST00000392128 ZNF142P52746 1687 aaPredicted RBP15.49■□□□□ 0.07
SMARCAL1-203ENST00000392128 FAM135BQ49AJ0 1406 aa15.49■□□□□ 0.07
SMARCAL1-203ENST00000392128 ATAD2Q6PL18 1390 aa15.48■□□□□ 0.07
SMARCAL1-203ENST00000392128 THEMISQ8N1K5 641 aaPredicted RBP15.48■□□□□ 0.07
SMARCAL1-203ENST00000392128 SIRT1Q96EB6 747 aa15.48■□□□□ 0.07
SMARCAL1-203ENST00000392128 EID1Q9Y6B2 187 aa15.48■□□□□ 0.07
SMARCAL1-203ENST00000392128 PLPPR3Q6T4P5 718 aa15.48■□□□□ 0.07
SMARCAL1-203ENST00000392128 TXNDC2Q86VQ3 553 aa15.48■□□□□ 0.07
SMARCAL1-203ENST00000392128 SLC12A5Q9H2X9 1139 aa15.48■□□□□ 0.07
SMARCAL1-203ENST00000392128 MINK1Q8N4C8 1332 aaPredicted RBP15.48■□□□□ 0.07
SMARCAL1-203ENST00000392128 ANKRD36BQ8N2N9 1353 aa15.47■□□□□ 0.07
SMARCAL1-203ENST00000392128 CABP2Q9NPB3 220 aa15.47■□□□□ 0.07
SMARCAL1-203ENST00000392128 DIP2AQ14689 1571 aa15.46■□□□□ 0.07
SMARCAL1-203ENST00000392128 NSD3Q9BZ95 1437 aa15.46■□□□□ 0.07
SMARCAL1-203ENST00000392128 ZBED9Q6R2W3 1325 aa15.46■□□□□ 0.07
SMARCAL1-203ENST00000392128 BCANQ96GW7 911 aa15.46■□□□□ 0.07
SMARCAL1-203ENST00000392128 PLEKHH1Q9ULM0 1364 aa15.45■□□□□ 0.06
SMARCAL1-203ENST00000392128 SETD1BQ9UPS6 1966 aaKnown RBP15.45■□□□□ 0.06
SMARCAL1-203ENST00000392128 SRPK2P78362 688 aaKnown RBP15.45■□□□□ 0.06
SMARCAL1-203ENST00000392128 PPP2R1AP30153 589 aa15.45■□□□□ 0.06
SMARCAL1-203ENST00000392128 WAPLQ7Z5K2 1190 aa15.44■□□□□ 0.06
SMARCAL1-203ENST00000392128 INSRP06213 1382 aa15.44■□□□□ 0.06
SMARCAL1-203ENST00000392128 CDK19Q9BWU1 502 aa15.43■□□□□ 0.06
SMARCAL1-203ENST00000392128 ADGRB2O60241 1585 aa15.41■□□□□ 0.06
SMARCAL1-203ENST00000392128 TBX22Q9Y458 520 aa15.41■□□□□ 0.06
SMARCAL1-203ENST00000392128 CD163L1Q9NR16 1453 aa15.41■□□□□ 0.06
SMARCAL1-203ENST00000392128 A0A1W2PP64 1363 aa15.41■□□□□ 0.06
SMARCAL1-203ENST00000392128 NSD2O96028 1365 aa15.41■□□□□ 0.06
SMARCAL1-203ENST00000392128 CGNL1Q0VF96 1302 aa15.41■□□□□ 0.06
SMARCAL1-203ENST00000392128 ROBO2Q9HCK4 1378 aa15.4■□□□□ 0.06
SMARCAL1-203ENST00000392128 PTPRUQ92729 1446 aa15.39■□□□□ 0.05
SMARCAL1-203ENST00000392128 ATP7BP35670 1465 aa15.38■□□□□ 0.05
SMARCAL1-203ENST00000392128 WASLO00401 505 aaPredicted RBP15.38■□□□□ 0.05
SMARCAL1-203ENST00000392128 TERF2IPQ9NYB0 399 aa15.38■□□□□ 0.05
SMARCAL1-203ENST00000392128 SLC26A8Q96RN1 970 aa15.38■□□□□ 0.05
SMARCAL1-203ENST00000392128 ANKRD26Q9UPS8 1709 aa15.38■□□□□ 0.05
SMARCAL1-203ENST00000392128 BLMP54132 1417 aaPredicted RBP15.37■□□□□ 0.05
SMARCAL1-203ENST00000392128 PTCH1Q13635 1447 aa15.37■□□□□ 0.05
SMARCAL1-203ENST00000392128 XRN1Q8IZH2 1706 aaKnown RBP15.37■□□□□ 0.05
SMARCAL1-203ENST00000392128 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.37■□□□□ 0.05
SMARCAL1-203ENST00000392128 MORC1Q86VD1 984 aa15.35■□□□□ 0.05
SMARCAL1-203ENST00000392128 PIK3R4Q99570 1358 aa15.35■□□□□ 0.05
SMARCAL1-203ENST00000392128 HDGFL2Q7Z4V5 671 aaPredicted RBP15.35■□□□□ 0.05
SMARCAL1-203ENST00000392128 KIF20BQ96Q89 1820 aa15.35■□□□□ 0.05
SMARCAL1-203ENST00000392128 CABP1Q9NZU7 370 aa15.34■□□□□ 0.05
SMARCAL1-203ENST00000392128 AMOTL2Q9Y2J4 779 aa15.34■□□□□ 0.05
SMARCAL1-203ENST00000392128 ANKLE2Q86XL3 938 aa15.33■□□□□ 0.04
SMARCAL1-203ENST00000392128 POLR3AO14802 1390 aaPredicted RBP15.33■□□□□ 0.04
SMARCAL1-203ENST00000392128 CDC42BPGQ6DT37 1551 aa15.32■□□□□ 0.04
SMARCAL1-203ENST00000392128 PPIP5K1Q6PFW1 1433 aa15.32■□□□□ 0.04
SMARCAL1-203ENST00000392128 TOPAZ1Q8N9V7 1692 aa15.32■□□□□ 0.04
SMARCAL1-203ENST00000392128 AKAP12Q02952 1782 aa15.32■□□□□ 0.04
SMARCAL1-203ENST00000392128 CPSF1Q10570 1443 aaKnown RBP15.32■□□□□ 0.04
SMARCAL1-203ENST00000392128 MON2Q7Z3U7 1717 aa15.32■□□□□ 0.04
SMARCAL1-203ENST00000392128 ITSN1Q15811 1721 aa15.31■□□□□ 0.04
SMARCAL1-203ENST00000392128 WDR43Q15061 677 aaKnown RBP eCLIP15.31■□□□□ 0.04
SMARCAL1-203ENST00000392128 CHD2O14647 1828 aaKnown RBP15.31■□□□□ 0.04
SMARCAL1-203ENST00000392128 NUDT16Q96DE0 195 aaKnown RBP15.31■□□□□ 0.04
SMARCAL1-203ENST00000392128 ADAMTS8Q9UP79 889 aa15.3■□□□□ 0.04
SMARCAL1-203ENST00000392128 CCDC61Q9Y6R9 512 aa15.3■□□□□ 0.04
SMARCAL1-203ENST00000392128 SMG6Q86US8 1419 aaKnown RBP15.3■□□□□ 0.04
SMARCAL1-203ENST00000392128 SHPRHQ149N8 1683 aa15.29■□□□□ 0.04
SMARCAL1-203ENST00000392128 FYB1O15117 783 aa15.28■□□□□ 0.04
SMARCAL1-203ENST00000392128 EDC4Q6P2E9 1401 aaKnown RBP15.28■□□□□ 0.04
SMARCAL1-203ENST00000392128 PRR36Q9H6K5 1346 aa15.27■□□□□ 0.04
SMARCAL1-203ENST00000392128 TNNT2P45379 298 aaPredicted RBP15.26■□□□□ 0.03
SMARCAL1-203ENST00000392128 GGNBP2Q9H3C7 697 aa15.26■□□□□ 0.03
SMARCAL1-203ENST00000392128 NPHP4O75161 1426 aaPredicted RBP15.26■□□□□ 0.03
SMARCAL1-203ENST00000392128 NUDCQ9Y266 331 aa15.25■□□□□ 0.03
SMARCAL1-203ENST00000392128 KCNA6P17658 529 aa15.24■□□□□ 0.03
SMARCAL1-203ENST00000392128 MTHFSP49914 203 aa15.24■□□□□ 0.03
SMARCAL1-203ENST00000392128 PDE3BQ13370 1112 aa15.24■□□□□ 0.03
SMARCAL1-203ENST00000392128 SUPT16HQ9Y5B9 1047 aaKnown RBP15.24■□□□□ 0.03
SMARCAL1-203ENST00000392128 NRKQ7Z2Y5 1582 aa15.24■□□□□ 0.03
SMARCAL1-203ENST00000392128 ZNF692Q9BU19 519 aaPredicted RBP15.24■□□□□ 0.03
SMARCAL1-203ENST00000392128 NEFLP07196 543 aa15.23■□□□□ 0.03
SMARCAL1-203ENST00000392128 CFAP53Q96M91 514 aa15.23■□□□□ 0.03
SMARCAL1-203ENST00000392128 NCKAP5LQ9HCH0 1330 aa15.23■□□□□ 0.03
SMARCAL1-203ENST00000392128 PLEKHG3A1L390 1219 aa15.23■□□□□ 0.03
SMARCAL1-203ENST00000392128 FMN2Q9NZ56 1722 aa15.22■□□□□ 0.03
SMARCAL1-203ENST00000392128 SENP3-EIF4A1A0A087X0R7 540 aa15.22■□□□□ 0.03
SMARCAL1-203ENST00000392128 NKTRP30414 1462 aaKnown RBP15.22■□□□□ 0.03
SMARCAL1-203ENST00000392128 RGPD8O14715 1765 aaPredicted RBP15.21■□□□□ 0.03
SMARCAL1-203ENST00000392128 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.21■□□□□ 0.03
SMARCAL1-203ENST00000392128 NALCNQ8IZF0 1738 aa15.21■□□□□ 0.03
SMARCAL1-203ENST00000392128 ANKARQ7Z5J8 1434 aa15.21■□□□□ 0.03
SMARCAL1-203ENST00000392128 NWD1Q149M9 1564 aa15.2■□□□□ 0.02
SMARCAL1-203ENST00000392128 COL3A1P02461 1466 aaPredicted RBP15.2■□□□□ 0.02
SMARCAL1-203ENST00000392128 FKBP8Q14318 412 aa15.19■□□□□ 0.02
SMARCAL1-203ENST00000392128 SALL2Q9Y467 1007 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms