RNA–Protein interactions for RNA: ENST00000390866.1

SNORD78.1-201, Transcript of small nucleolar RNA, C/D box 78, humanhuman

BASIC

Gene SNORD78, Length 65 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD78.1-201ENST00000390866 PPFIA3O75145 1194 aa4.45□□□□□ -1.7
SNORD78.1-201ENST00000390866 TSR1Q2NL82 804 aaKnown RBP4.45□□□□□ -1.7
SNORD78.1-201ENST00000390866 ZMYM1Q5SVZ6 1142 aa4.45□□□□□ -1.7
SNORD78.1-201ENST00000390866 SOBPA7XYQ1 873 aa4.44□□□□□ -1.7
SNORD78.1-201ENST00000390866 NR1I2O75469 434 aa4.44□□□□□ -1.7
SNORD78.1-201ENST00000390866 GPR161Q8N6U8 529 aaKnown RBP4.44□□□□□ -1.7
SNORD78.1-201ENST00000390866 YBX3P16989 372 aaKnown RBP eCLIP4.43□□□□□ -1.7
SNORD78.1-201ENST00000390866 EMILIN3Q9NT22 766 aa4.43□□□□□ -1.7
SNORD78.1-201ENST00000390866 ZBTB24O43167 697 aaPredicted RBP4.42□□□□□ -1.7
SNORD78.1-201ENST00000390866 ACTN4O43707 911 aaKnown RBP4.42□□□□□ -1.7
SNORD78.1-201ENST00000390866 COL25A1Q9BXS0 654 aaPredicted RBP4.42□□□□□ -1.7
SNORD78.1-201ENST00000390866 PHF20L1A8MW92 1017 aa4.41□□□□□ -1.7
SNORD78.1-201ENST00000390866 MAP3K7O43318 606 aa4.41□□□□□ -1.7
SNORD78.1-201ENST00000390866 ITGB7P26010 798 aa4.41□□□□□ -1.7
SNORD78.1-201ENST00000390866 REPIN1Q9BWE0 567 aaKnown RBP4.41□□□□□ -1.7
SNORD78.1-201ENST00000390866 EN1Q05925 392 aaPredicted RBP4.4□□□□□ -1.71
SNORD78.1-201ENST00000390866 SPSB2Q99619 263 aa4.4□□□□□ -1.71
SNORD78.1-201ENST00000390866 SCO2A0A1W2PP80 73 aa4.39□□□□□ -1.71
SNORD78.1-201ENST00000390866 PDE4AP27815 886 aa4.39□□□□□ -1.71
SNORD78.1-201ENST00000390866 KMT5BQ4FZB7 885 aa4.38□□□□□ -1.71
SNORD78.1-201ENST00000390866 RNFT1Q5M7Z0 435 aa4.38□□□□□ -1.71
SNORD78.1-201ENST00000390866 SCUBE3Q8IX30 993 aa4.38□□□□□ -1.71
SNORD78.1-201ENST00000390866 CERKQ8TCT0 537 aa4.38□□□□□ -1.71
SNORD78.1-201ENST00000390866 CNTNAP5Q8WYK1 1306 aa4.38□□□□□ -1.71
SNORD78.1-201ENST00000390866 NCKAP5LQ9HCH0 1330 aa4.38□□□□□ -1.71
SNORD78.1-201ENST00000390866 ALDH1A1P00352 501 aa4.37□□□□□ -1.71
SNORD78.1-201ENST00000390866 TRIM32Q13049 653 aa4.37□□□□□ -1.71
SNORD78.1-201ENST00000390866 FZD5Q13467 585 aa4.37□□□□□ -1.71
SNORD78.1-201ENST00000390866 NBPF11Q86T75 865 aa4.36□□□□□ -1.71
SNORD78.1-201ENST00000390866 DDX12PQ92771 950 aa4.36□□□□□ -1.71
SNORD78.1-201ENST00000390866 ZFP64Q9NPA5 681 aa4.35□□□□□ -1.71
SNORD78.1-201ENST00000390866 MAP3K10Q02779 954 aa4.34□□□□□ -1.71
SNORD78.1-201ENST00000390866 SCARF1Q14162 830 aa4.34□□□□□ -1.71
SNORD78.1-201ENST00000390866 MRPL14Q6P1L8 145 aaKnown RBP4.34□□□□□ -1.71
SNORD78.1-201ENST00000390866 BEND7Q8N7W2 519 aaPredicted RBP4.34□□□□□ -1.71
SNORD78.1-201ENST00000390866 PURBQ96QR8 312 aaKnown RBP4.34□□□□□ -1.71
SNORD78.1-201ENST00000390866 MAN1A2O60476 641 aa4.33□□□□□ -1.72
SNORD78.1-201ENST00000390866 NBR1Q14596 966 aa4.33□□□□□ -1.72
SNORD78.1-201ENST00000390866 LYPD4Q6UWN0 246 aa4.33□□□□□ -1.72
SNORD78.1-201ENST00000390866 DDX27Q96GQ7 796 aaKnown RBP4.33□□□□□ -1.72
SNORD78.1-201ENST00000390866 KRBA1A5PL33 1030 aa4.32□□□□□ -1.72
SNORD78.1-201ENST00000390866 CFHP08603 1231 aa4.32□□□□□ -1.72
SNORD78.1-201ENST00000390866 ARTNQ5T4W7 220 aa4.32□□□□□ -1.72
SNORD78.1-201ENST00000390866 RC3H1Q5TC82 1133 aaKnown RBP4.32□□□□□ -1.72
SNORD78.1-201ENST00000390866 LARP6Q9BRS8 491 aaKnown RBP4.32□□□□□ -1.72
SNORD78.1-201ENST00000390866 SEMA6BQ9H3T3 888 aa4.32□□□□□ -1.72
SNORD78.1-201ENST00000390866 FOXD4L6Q3SYB3 417 aaPredicted RBP4.31□□□□□ -1.72
SNORD78.1-201ENST00000390866 FOXD4L3Q6VB84 417 aaPredicted RBP4.31□□□□□ -1.72
SNORD78.1-201ENST00000390866 PODNQ7Z5L7 613 aa4.31□□□□□ -1.72
SNORD78.1-201ENST00000390866 RBM27Q9P2N5 1060 aaKnown RBP4.31□□□□□ -1.72
SNORD78.1-201ENST00000390866 TXKP42681 527 aa4.3□□□□□ -1.72
SNORD78.1-201ENST00000390866 ENAMQ9NRM1 1142 aa4.3□□□□□ -1.72
SNORD78.1-201ENST00000390866 FAM160A2Q8N612 972 aaPredicted RBP4.29□□□□□ -1.72
SNORD78.1-201ENST00000390866 NANOS1Q8WY41 292 aaKnown RBP4.29□□□□□ -1.72
SNORD78.1-201ENST00000390866 WASF2Q9Y6W5 498 aa4.29□□□□□ -1.72
SNORD78.1-201ENST00000390866 ADAMTS2O95450 1211 aa4.28□□□□□ -1.72
SNORD78.1-201ENST00000390866 CELA2BP08218 269 aaPredicted RBP4.28□□□□□ -1.72
SNORD78.1-201ENST00000390866 EYA1Q99502 592 aa4.28□□□□□ -1.72
SNORD78.1-201ENST00000390866 PUS10Q3MIT2 529 aaKnown RBP4.27□□□□□ -1.73
SNORD78.1-201ENST00000390866 TTC13Q8NBP0 860 aa4.27□□□□□ -1.73
SNORD78.1-201ENST00000390866 SKOR1P84550 965 aa4.26□□□□□ -1.73
SNORD78.1-201ENST00000390866 MFSD10Q14728 455 aa4.26□□□□□ -1.73
SNORD78.1-201ENST00000390866 PRDM9Q9NQV7 894 aa4.26□□□□□ -1.73
SNORD78.1-201ENST00000390866 PAX4O43316 350 aa4.24□□□□□ -1.73
SNORD78.1-201ENST00000390866 WNT7BP56706 349 aa4.24□□□□□ -1.73
SNORD78.1-201ENST00000390866 THAP11Q96EK4 314 aa4.24□□□□□ -1.73
SNORD78.1-201ENST00000390866 DPYSL4O14531 572 aa4.23□□□□□ -1.73
SNORD78.1-201ENST00000390866 SIAH2O43255 324 aa4.23□□□□□ -1.73
SNORD78.1-201ENST00000390866 MCTP1Q6DN14 999 aa4.23□□□□□ -1.73
SNORD78.1-201ENST00000390866 SLC10A3P09131 477 aa4.21□□□□□ -1.74
SNORD78.1-201ENST00000390866 SRSF11Q05519 484 aaKnown RBP4.21□□□□□ -1.74
SNORD78.1-201ENST00000390866 PADI6Q6TGC4 694 aa4.21□□□□□ -1.74
SNORD78.1-201ENST00000390866 FMNL2Q96PY5 1086 aa4.21□□□□□ -1.74
SNORD78.1-201ENST00000390866 PRIM1P49642 420 aaKnown RBP4.2□□□□□ -1.74
SNORD78.1-201ENST00000390866 ALYREFQ86V81 257 aaKnown RBP4.2□□□□□ -1.74
SNORD78.1-201ENST00000390866 NEDD1Q8NHV4 660 aa4.2□□□□□ -1.74
SNORD78.1-201ENST00000390866 FMNL1O95466 1100 aaPredicted RBP4.19□□□□□ -1.74
SNORD78.1-201ENST00000390866 DNAJB2P25686 324 aa4.19□□□□□ -1.74
SNORD78.1-201ENST00000390866 VWA5B2Q8N398 1253 aa4.19□□□□□ -1.74
SNORD78.1-201ENST00000390866 CDHR5Q9HBB8 845 aa4.19□□□□□ -1.74
SNORD78.1-201ENST00000390866 FECHP22830 423 aa4.18□□□□□ -1.74
SNORD78.1-201ENST00000390866 DOC2BQ14184 412 aa4.18□□□□□ -1.74
SNORD78.1-201ENST00000390866 C6orf118Q5T5N4 469 aa4.18□□□□□ -1.74
SNORD78.1-201ENST00000390866 SV2AQ7L0J3 742 aa4.18□□□□□ -1.74
SNORD78.1-201ENST00000390866 TMEM134Q9H6X4 195 aa4.18□□□□□ -1.74
SNORD78.1-201ENST00000390866 DNMT3LQ9UJW3 386 aa4.18□□□□□ -1.74
SNORD78.1-201ENST00000390866 C1QTNF9BB2RNN3 333 aa4.17□□□□□ -1.74
SNORD78.1-201ENST00000390866 TIMP2P16035 220 aa4.17□□□□□ -1.74
SNORD78.1-201ENST00000390866 PTSQ03393 145 aa4.17□□□□□ -1.74
SNORD78.1-201ENST00000390866 MSS51Q4VC12 460 aa4.17□□□□□ -1.74
SNORD78.1-201ENST00000390866 LCE4AQ5TA78 99 aa4.17□□□□□ -1.74
SNORD78.1-201ENST00000390866 SH3RF1Q7Z6J0 888 aa4.17□□□□□ -1.74
SNORD78.1-201ENST00000390866 EHBP1Q8NDI1 1231 aa4.17□□□□□ -1.74
SNORD78.1-201ENST00000390866 COL8A1P27658 744 aa4.16□□□□□ -1.74
SNORD78.1-201ENST00000390866 CCER1Q8TC90 406 aaPredicted RBP4.16□□□□□ -1.74
SNORD78.1-201ENST00000390866 SOS2Q07890 1332 aaPredicted RBP4.16□□□□□ -1.74
SNORD78.1-201ENST00000390866 CDC14CA4D256 554 aa4.15□□□□□ -1.75
SNORD78.1-201ENST00000390866 WDR4P57081 412 aaKnown RBP4.15□□□□□ -1.75
SNORD78.1-201ENST00000390866 MORN1Q5T089 497 aa4.15□□□□□ -1.75
SNORD78.1-201ENST00000390866 CCDC155Q8N6L0 562 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms