RNA–Protein interactions for RNA: ENST00000390496.1

TRAJ41-201, Transcript of T cell receptor alpha joining 41, humanhuman

APPRIS P1 BASIC

Gene TRAJ41, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ41-201ENST00000390496 NUTM2DQ5VT03 806 aaPredicted RBP3.39□□□□□ -1.87
TRAJ41-201ENST00000390496 BLOC1S3Q6QNY0 202 aa3.39□□□□□ -1.87
TRAJ41-201ENST00000390496 NUTM2AQ8IVF1 878 aaPredicted RBP3.39□□□□□ -1.87
TRAJ41-201ENST00000390496 ARXQ96QS3 562 aa3.39□□□□□ -1.87
TRAJ41-201ENST00000390496 NBPF3Q9H094 633 aa3.39□□□□□ -1.87
TRAJ41-201ENST00000390496 ZBTB3Q9H5J0 574 aa3.39□□□□□ -1.87
TRAJ41-201ENST00000390496 TK2O00142 265 aa3.38□□□□□ -1.87
TRAJ41-201ENST00000390496 TLL1O43897 1013 aa3.38□□□□□ -1.87
TRAJ41-201ENST00000390496 USP46P62068 366 aa3.38□□□□□ -1.87
TRAJ41-201ENST00000390496 MTMR2Q13614 643 aa3.38□□□□□ -1.87
TRAJ41-201ENST00000390496 MORN1Q5T089 497 aa3.38□□□□□ -1.87
TRAJ41-201ENST00000390496 ANKRD13DQ6ZTN6 518 aa3.38□□□□□ -1.87
TRAJ41-201ENST00000390496 LAPTM4BQ86VI4 370 aa3.38□□□□□ -1.87
TRAJ41-201ENST00000390496 HOMEZQ8IX15 550 aa3.38□□□□□ -1.87
TRAJ41-201ENST00000390496 SLF2Q8IX21 1173 aa3.38□□□□□ -1.87
TRAJ41-201ENST00000390496 MRPL50Q8N5N7 158 aaKnown RBP3.38□□□□□ -1.87
TRAJ41-201ENST00000390496 BANK1Q8NDB2 785 aa3.38□□□□□ -1.87
TRAJ41-201ENST00000390496 ADAMTS19Q8TE59 1207 aa3.38□□□□□ -1.87
TRAJ41-201ENST00000390496 LRCH3Q96II8 777 aa3.38□□□□□ -1.87
TRAJ41-201ENST00000390496 PRDM9Q9NQV7 894 aa3.38□□□□□ -1.87
TRAJ41-201ENST00000390496 HPS5Q9UPZ3 1129 aa3.38□□□□□ -1.87
TRAJ41-201ENST00000390496 SLC27A5Q9Y2P5 690 aa3.38□□□□□ -1.87
TRAJ41-201ENST00000390496 POTEMA6NI47 508 aa3.37□□□□□ -1.87
TRAJ41-201ENST00000390496 C6orf229H3BNL8 230 aa3.37□□□□□ -1.87
TRAJ41-201ENST00000390496 GJA5P36382 358 aa3.37□□□□□ -1.87
TRAJ41-201ENST00000390496 TMEM259Q4ZIN3 620 aa3.37□□□□□ -1.87
TRAJ41-201ENST00000390496 PRPF38BQ5VTL8 546 aaKnown RBP3.37□□□□□ -1.87
TRAJ41-201ENST00000390496 PRR7Q8TB68 274 aa3.37□□□□□ -1.87
TRAJ41-201ENST00000390496 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.37□□□□□ -1.87
TRAJ41-201ENST00000390496 SOWAHBA6NEL2 793 aa3.36□□□□□ -1.87
TRAJ41-201ENST00000390496 ACTN4O43707 911 aaKnown RBP3.36□□□□□ -1.87
TRAJ41-201ENST00000390496 ATP6V1AP38606 617 aa3.36□□□□□ -1.87
TRAJ41-201ENST00000390496 PLSCR2Q9NRY7 297 aa3.36□□□□□ -1.87
TRAJ41-201ENST00000390496 WBP1LQ9NX94 342 aa3.36□□□□□ -1.87
TRAJ41-201ENST00000390496 RAD21O60216 631 aa3.35□□□□□ -1.87
TRAJ41-201ENST00000390496 VAC14Q08AM6 782 aa3.35□□□□□ -1.87
TRAJ41-201ENST00000390496 NR6A1Q15406 480 aa3.35□□□□□ -1.87
TRAJ41-201ENST00000390496 KMT5BQ4FZB7 885 aa3.35□□□□□ -1.87
TRAJ41-201ENST00000390496 ANKK1Q8NFD2 765 aa3.35□□□□□ -1.87
TRAJ41-201ENST00000390496 WNT2BQ93097 391 aa3.35□□□□□ -1.87
TRAJ41-201ENST00000390496 THAP11Q96EK4 314 aa3.35□□□□□ -1.87
TRAJ41-201ENST00000390496 MAP10Q9P2G4 905 aa3.35□□□□□ -1.87
TRAJ41-201ENST00000390496 ZNF330Q9Y3S2 320 aaPredicted RBP3.35□□□□□ -1.87
TRAJ41-201ENST00000390496 COPS2P61201 443 aa3.34□□□□□ -1.87
TRAJ41-201ENST00000390496 THSD4Q6ZMP0 1018 aa3.34□□□□□ -1.87
TRAJ41-201ENST00000390496 GLMNQ92990 594 aa3.34□□□□□ -1.87
TRAJ41-201ENST00000390496 NDUFB9Q9Y6M9 179 aa3.34□□□□□ -1.87
TRAJ41-201ENST00000390496 SOCS7O14512 581 aa3.33□□□□□ -1.88
TRAJ41-201ENST00000390496 F12P00748 615 aaPredicted RBP3.33□□□□□ -1.88
TRAJ41-201ENST00000390496 HDGFP51858 240 aaKnown RBP3.33□□□□□ -1.88
TRAJ41-201ENST00000390496 RSPH4AQ5TD94 716 aa3.33□□□□□ -1.88
TRAJ41-201ENST00000390496 RETREG3Q86VR2 466 aa3.33□□□□□ -1.88
TRAJ41-201ENST00000390496 FAM160A2Q8N612 972 aaPredicted RBP3.33□□□□□ -1.88
TRAJ41-201ENST00000390496 HELBQ8NG08 1087 aaPredicted RBP3.33□□□□□ -1.88
TRAJ41-201ENST00000390496 KCTD12Q96CX2 325 aaKnown RBP3.33□□□□□ -1.88
TRAJ41-201ENST00000390496 UCN2Q96RP3 112 aa3.33□□□□□ -1.88
TRAJ41-201ENST00000390496 TSR3Q9UJK0 312 aaKnown RBP3.33□□□□□ -1.88
TRAJ41-201ENST00000390496 PCDHB3Q9Y5E6 796 aa3.33□□□□□ -1.88
TRAJ41-201ENST00000390496 GOLGA8CPA6NN73 597 aa3.32□□□□□ -1.88
TRAJ41-201ENST00000390496 PPP4CP60510 307 aa3.32□□□□□ -1.88
TRAJ41-201ENST00000390496 BRICD5Q6PL45 260 aa3.32□□□□□ -1.88
TRAJ41-201ENST00000390496 SCUBE3Q8IX30 993 aa3.32□□□□□ -1.88
TRAJ41-201ENST00000390496 CARNS1A5YM72 827 aa3.31□□□□□ -1.88
TRAJ41-201ENST00000390496 PIK3CDO00329 1044 aa3.31□□□□□ -1.88
TRAJ41-201ENST00000390496 JUNDP17535 347 aa3.31□□□□□ -1.88
TRAJ41-201ENST00000390496 SLC4A3P48751 1232 aa3.31□□□□□ -1.88
TRAJ41-201ENST00000390496 GRIPAP1Q4V328 841 aa3.31□□□□□ -1.88
TRAJ41-201ENST00000390496 POTEGQ6S5H5 508 aa3.31□□□□□ -1.88
TRAJ41-201ENST00000390496 LYPD8Q6UX82 237 aa3.31□□□□□ -1.88
TRAJ41-201ENST00000390496 NKX2-3Q8TAU0 364 aa3.31□□□□□ -1.88
TRAJ41-201ENST00000390496 ZNF516Q92618 1163 aa3.31□□□□□ -1.88
TRAJ41-201ENST00000390496 CCDC97Q96F63 343 aaPredicted RBP3.31□□□□□ -1.88
TRAJ41-201ENST00000390496 MTRQ99707 1265 aa3.31□□□□□ -1.88
TRAJ41-201ENST00000390496 USB1Q9BQ65 265 aaKnown RBP3.31□□□□□ -1.88
TRAJ41-201ENST00000390496 OCSTAMPQ9BR26 566 aa3.31□□□□□ -1.88
TRAJ41-201ENST00000390496 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.3□□□□□ -1.88
TRAJ41-201ENST00000390496 DXOO77932 396 aaKnown RBP3.3□□□□□ -1.88
TRAJ41-201ENST00000390496 FMNL1O95466 1100 aaPredicted RBP3.3□□□□□ -1.88
TRAJ41-201ENST00000390496 FBXO45P0C2W1 286 aa3.3□□□□□ -1.88
TRAJ41-201ENST00000390496 PTPN5P54829 565 aa3.3□□□□□ -1.88
TRAJ41-201ENST00000390496 TRIM26Q12899 539 aaPredicted RBP3.3□□□□□ -1.88
TRAJ41-201ENST00000390496 Q3C1V9 767 aa3.3□□□□□ -1.88
TRAJ41-201ENST00000390496 CFAP70Q5T0N1 1121 aa3.3□□□□□ -1.88
TRAJ41-201ENST00000390496 HDGFL1Q5TGJ6 251 aa3.3□□□□□ -1.88
TRAJ41-201ENST00000390496 RETREG2Q8NC44 543 aa3.3□□□□□ -1.88
TRAJ41-201ENST00000390496 NECTIN2Q92692 538 aa3.3□□□□□ -1.88
TRAJ41-201ENST00000390496 CALR3Q96L12 384 aaKnown RBP3.3□□□□□ -1.88
TRAJ41-201ENST00000390496 NR1I2O75469 434 aa3.29□□□□□ -1.88
TRAJ41-201ENST00000390496 MSS51Q4VC12 460 aa3.29□□□□□ -1.88
TRAJ41-201ENST00000390496 PTCRAQ6ISU1 281 aaPredicted RBP3.29□□□□□ -1.88
TRAJ41-201ENST00000390496 CDAN1Q8IWY9 1227 aa3.29□□□□□ -1.88
TRAJ41-201ENST00000390496 FAM174AQ8TBP5 190 aa3.29□□□□□ -1.88
TRAJ41-201ENST00000390496 STAC3Q96MF2 364 aa3.29□□□□□ -1.88
TRAJ41-201ENST00000390496 SPSB2Q99619 263 aa3.29□□□□□ -1.88
TRAJ41-201ENST00000390496 ALG2Q9H553 416 aa3.29□□□□□ -1.88
TRAJ41-201ENST00000390496 ZPR1O75312 459 aa3.28□□□□□ -1.88
TRAJ41-201ENST00000390496 S1PR4O95977 384 aa3.28□□□□□ -1.88
TRAJ41-201ENST00000390496 ADH1BP00325 375 aa3.28□□□□□ -1.88
TRAJ41-201ENST00000390496 CCNYL3P0C7X3 344 aa3.28□□□□□ -1.88
TRAJ41-201ENST00000390496 RFX1P22670 979 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms