RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 C20orf173Q96LM9 149 aa-0.11□□□□□ -2.43
RNU6-1340P-201ENST00000384438 TMUB1Q9BVT8 246 aa-0.11□□□□□ -2.43
RNU6-1340P-201ENST00000384438 DLL4Q9NR61 685 aa-0.11□□□□□ -2.43
RNU6-1340P-201ENST00000384438 LHX6Q9UPM6 363 aa-0.11□□□□□ -2.43
RNU6-1340P-201ENST00000384438 TENM3Q9P273 2699 aa-0.11□□□□□ -2.43
RNU6-1340P-201ENST00000384438 CHRNA4P43681 627 aa-0.12□□□□□ -2.43
RNU6-1340P-201ENST00000384438 MNX1P50219 401 aaPredicted RBP-0.12□□□□□ -2.43
RNU6-1340P-201ENST00000384438 KRTAP13-3Q3SY46 172 aa-0.12□□□□□ -2.43
RNU6-1340P-201ENST00000384438 RNFT1Q5M7Z0 435 aa-0.12□□□□□ -2.43
RNU6-1340P-201ENST00000384438 SIAH1Q8IUQ4 282 aa-0.12□□□□□ -2.43
RNU6-1340P-201ENST00000384438 TMEM106CQ9BVX2 250 aa-0.12□□□□□ -2.43
RNU6-1340P-201ENST00000384438 LMO1P25800 156 aa-0.13□□□□□ -2.43
RNU6-1340P-201ENST00000384438 GPR162Q16538 588 aa-0.13□□□□□ -2.43
RNU6-1340P-201ENST00000384438 ZXDCQ2QGD7 858 aaPredicted RBP-0.13□□□□□ -2.43
RNU6-1340P-201ENST00000384438 CDCP2Q5VXM1 449 aa-0.13□□□□□ -2.43
RNU6-1340P-201ENST00000384438 C1QL4Q86Z23 238 aa-0.13□□□□□ -2.43
RNU6-1340P-201ENST00000384438 RELTQ969Z4 430 aa-0.13□□□□□ -2.43
RNU6-1340P-201ENST00000384438 SLC4A5Q9BY07 1137 aa-0.13□□□□□ -2.43
RNU6-1340P-201ENST00000384438 KCNK12Q9HB15 430 aa-0.13□□□□□ -2.43
RNU6-1340P-201ENST00000384438 LMCD1Q9NZU5 365 aa-0.13□□□□□ -2.43
RNU6-1340P-201ENST00000384438 NPM1P06748 294 aaKnown RBP eCLIP-0.14□□□□□ -2.43
RNU6-1340P-201ENST00000384438 CELA2BP08218 269 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-1340P-201ENST00000384438 POU3F3P20264 500 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-1340P-201ENST00000384438 HMGA2P52926 109 aa-0.14□□□□□ -2.43
RNU6-1340P-201ENST00000384438 INHBCP55103 352 aa-0.14□□□□□ -2.43
RNU6-1340P-201ENST00000384438 ZNF648Q5T619 568 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-1340P-201ENST00000384438 PLPPR3Q6T4P5 718 aa-0.14□□□□□ -2.43
RNU6-1340P-201ENST00000384438 LIAT1Q6ZQX7 453 aa-0.14□□□□□ -2.43
RNU6-1340P-201ENST00000384438 PODNQ7Z5L7 613 aa-0.14□□□□□ -2.43
RNU6-1340P-201ENST00000384438 COL25A1Q9BXS0 654 aaPredicted RBP-0.14□□□□□ -2.43
RNU6-1340P-201ENST00000384438 LILRB3O75022 631 aa-0.15□□□□□ -2.43
RNU6-1340P-201ENST00000384438 MRPL50Q8N5N7 158 aaKnown RBP-0.15□□□□□ -2.43
RNU6-1340P-201ENST00000384438 SOWAHBA6NEL2 793 aa-0.16□□□□□ -2.44
RNU6-1340P-201ENST00000384438 FOXD2O60548 495 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-1340P-201ENST00000384438 ADRB1P08588 477 aa-0.16□□□□□ -2.44
RNU6-1340P-201ENST00000384438 BCAMP50895 628 aa-0.16□□□□□ -2.44
RNU6-1340P-201ENST00000384438 GP2P55259 537 aaKnown RBP-0.16□□□□□ -2.44
RNU6-1340P-201ENST00000384438 RIC3Q7Z5B4 369 aa-0.16□□□□□ -2.44
RNU6-1340P-201ENST00000384438 GRASPQ7Z6J2 395 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-1340P-201ENST00000384438 SLC16A11Q8NCK7 471 aa-0.16□□□□□ -2.44
RNU6-1340P-201ENST00000384438 SGIP1Q9BQI5 828 aa-0.16□□□□□ -2.44
RNU6-1340P-201ENST00000384438 ZNF692Q9BU19 519 aaPredicted RBP-0.16□□□□□ -2.44
RNU6-1340P-201ENST00000384438 ENAMQ9NRM1 1142 aa-0.16□□□□□ -2.44
RNU6-1340P-201ENST00000384438 TPSG1Q9NRR2 321 aa-0.16□□□□□ -2.44
RNU6-1340P-201ENST00000384438 FAM53CQ9NYF3 392 aa-0.16□□□□□ -2.44
RNU6-1340P-201ENST00000384438 ADGRE2Q9UHX3 823 aa-0.16□□□□□ -2.44
RNU6-1340P-201ENST00000384438 RNF112Q9ULX5 631 aa-0.16□□□□□ -2.44
RNU6-1340P-201ENST00000384438 PPFIA3O75145 1194 aa-0.17□□□□□ -2.44
RNU6-1340P-201ENST00000384438 CFPP27918 469 aa-0.17□□□□□ -2.44
RNU6-1340P-201ENST00000384438 GATA4P43694 442 aa-0.17□□□□□ -2.44
RNU6-1340P-201ENST00000384438 MAP3K10Q02779 954 aa-0.17□□□□□ -2.44
RNU6-1340P-201ENST00000384438 RING1Q06587 406 aa-0.17□□□□□ -2.44
RNU6-1340P-201ENST00000384438 PEAR1Q5VY43 1037 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-1340P-201ENST00000384438 CIZ1Q9ULV3 898 aaPredicted RBP-0.17□□□□□ -2.44
RNU6-1340P-201ENST00000384438 MEGF11A6BM72 1044 aa-0.18□□□□□ -2.44
RNU6-1340P-201ENST00000384438 PROB1E7EW31 1015 aa-0.18□□□□□ -2.44
RNU6-1340P-201ENST00000384438 INHBBP09529 407 aa-0.18□□□□□ -2.44
RNU6-1340P-201ENST00000384438 NUDT7P0C024 238 aa-0.18□□□□□ -2.44
RNU6-1340P-201ENST00000384438 GGCXP38435 758 aa-0.18□□□□□ -2.44
RNU6-1340P-201ENST00000384438 ECM1Q16610 540 aa-0.18□□□□□ -2.44
RNU6-1340P-201ENST00000384438 TRIM46Q7Z4K8 759 aa-0.18□□□□□ -2.44
RNU6-1340P-201ENST00000384438 EDAQ92838 391 aa-0.18□□□□□ -2.44
RNU6-1340P-201ENST00000384438 TRIM52Q96A61 297 aa-0.18□□□□□ -2.44
RNU6-1340P-201ENST00000384438 TSPYL2Q9H2G4 693 aaPredicted RBP-0.18□□□□□ -2.44
RNU6-1340P-201ENST00000384438 PCMTD2Q9NV79 361 aa-0.18□□□□□ -2.44
RNU6-1340P-201ENST00000384438 PRRT2Q7Z6L0 340 aaPredicted RBP-0.19□□□□□ -2.44
RNU6-1340P-201ENST00000384438 PABPN1Q86U42 306 aaKnown RBP eCLIP-0.19□□□□□ -2.44
RNU6-1340P-201ENST00000384438 ANKK1Q8NFD2 765 aa-0.19□□□□□ -2.44
RNU6-1340P-201ENST00000384438 NKX2-3Q8TAU0 364 aa-0.19□□□□□ -2.44
RNU6-1340P-201ENST00000384438 ZNF516Q92618 1163 aa-0.19□□□□□ -2.44
RNU6-1340P-201ENST00000384438 IL21Q9HBE4 155 aa-0.19□□□□□ -2.44
RNU6-1340P-201ENST00000384438 SRRDQ9UH36 339 aa-0.19□□□□□ -2.44
RNU6-1340P-201ENST00000384438 NOTCH3Q9UM47 2321 aa-0.19□□□□□ -2.44
RNU6-1340P-201ENST00000384438 RNF223E7ERA6 249 aa-0.2□□□□□ -2.44
RNU6-1340P-201ENST00000384438 ADAMTS2O95450 1211 aa-0.2□□□□□ -2.44
RNU6-1340P-201ENST00000384438 HOXA5P20719 270 aa-0.2□□□□□ -2.44
RNU6-1340P-201ENST00000384438 RAP1GAPP47736 663 aa-0.2□□□□□ -2.44
RNU6-1340P-201ENST00000384438 ZXDAP98168 799 aa-0.2□□□□□ -2.44
RNU6-1340P-201ENST00000384438 SLC4A9Q96Q91 983 aa-0.2□□□□□ -2.44
RNU6-1340P-201ENST00000384438 MRIQ9BWK5 157 aa-0.2□□□□□ -2.44
RNU6-1340P-201ENST00000384438 PSDA5PKW4 1024 aaPredicted RBP-0.21□□□□□ -2.44
RNU6-1340P-201ENST00000384438 SLC4A2P04920 1241 aa-0.21□□□□□ -2.44
RNU6-1340P-201ENST00000384438 H2AFB1P0C5Y9 115 aa-0.21□□□□□ -2.44
RNU6-1340P-201ENST00000384438 H2AFB2P0C5Z0 115 aa-0.21□□□□□ -2.44
RNU6-1340P-201ENST00000384438 SNRPNP63162 240 aaKnown RBP-0.21□□□□□ -2.44
RNU6-1340P-201ENST00000384438 FOXC1Q12948 553 aa-0.21□□□□□ -2.44
RNU6-1340P-201ENST00000384438 ERFEQ4G0M1 354 aa-0.21□□□□□ -2.44
RNU6-1340P-201ENST00000384438 TMEM92Q6UXU6 159 aa-0.21□□□□□ -2.44
RNU6-1340P-201ENST00000384438 CYP4X1Q8N118 509 aa-0.21□□□□□ -2.44
RNU6-1340P-201ENST00000384438 ASIC4Q96FT7 647 aa-0.21□□□□□ -2.44
RNU6-1340P-201ENST00000384438 TRERF1Q96PN7 1200 aa-0.21□□□□□ -2.44
RNU6-1340P-201ENST00000384438 OTOGLQ3ZCN5 2332 aa-0.21□□□□□ -2.44
RNU6-1340P-201ENST00000384438 SLPIP03973 132 aa-0.22□□□□□ -2.44
RNU6-1340P-201ENST00000384438 ZSCAN22P10073 491 aaPredicted RBP-0.22□□□□□ -2.44
RNU6-1340P-201ENST00000384438 PUM1Q14671 1186 aaKnown RBP eCLIP-0.22□□□□□ -2.44
RNU6-1340P-201ENST00000384438 SKOR2Q2VWA4 1001 aaPredicted RBP-0.22□□□□□ -2.44
RNU6-1340P-201ENST00000384438 ZNF843Q8N446 348 aa-0.22□□□□□ -2.44
RNU6-1340P-201ENST00000384438 MPNDQ8N594 471 aa-0.22□□□□□ -2.44
RNU6-1340P-201ENST00000384438 MTRQ99707 1265 aa-0.22□□□□□ -2.44
RNU6-1340P-201ENST00000384438 MYRFQ9Y2G1 1151 aa-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms