RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 ANKLE2Q86XL3 938 aa17.14■□□□□ 0.33
SNPH-201ENST00000381867 BECN2A8MW95 431 aa17.13■□□□□ 0.33
SNPH-201ENST00000381867 CREBRFQ8IUR6 639 aa17.13■□□□□ 0.33
SNPH-201ENST00000381867 CHMP5Q9NZZ3 219 aa17.13■□□□□ 0.33
SNPH-201ENST00000381867 PLIN1O60240 522 aa17.12■□□□□ 0.33
SNPH-201ENST00000381867 CFAP70Q5T0N1 1121 aa17.12■□□□□ 0.33
SNPH-201ENST00000381867 H3BQV1 296 aa17.12■□□□□ 0.33
SNPH-201ENST00000381867 EVA1CP58658 441 aa17.12■□□□□ 0.33
SNPH-201ENST00000381867 IFFO2Q5TF58 517 aa17.12■□□□□ 0.33
SNPH-201ENST00000381867 PLCH2O75038 1416 aa17.12■□□□□ 0.33
SNPH-201ENST00000381867 FAM13BQ9NYF5 915 aa17.12■□□□□ 0.33
SNPH-201ENST00000381867 NUP160Q12769 1436 aa17.12■□□□□ 0.33
SNPH-201ENST00000381867 FRAT2O75474 233 aaPredicted RBP17.11■□□□□ 0.33
SNPH-201ENST00000381867 CCAR2Q8N163 923 aaKnown RBP17.11■□□□□ 0.33
SNPH-201ENST00000381867 CHMP4CQ96CF2 233 aa17.11■□□□□ 0.33
SNPH-201ENST00000381867 NCOA1Q15788 1441 aa17.11■□□□□ 0.33
SNPH-201ENST00000381867 ANKRD45Q5TZF3 282 aa17.11■□□□□ 0.33
SNPH-201ENST00000381867 ZKSCAN2Q63HK3 967 aa17.11■□□□□ 0.33
SNPH-201ENST00000381867 ATP10BO94823 1461 aa17.1■□□□□ 0.33
SNPH-201ENST00000381867 WDR7Q9Y4E6 1490 aa17.1■□□□□ 0.33
SNPH-201ENST00000381867 FAM43AQ8N2R8 423 aa17.1■□□□□ 0.33
SNPH-201ENST00000381867 ZNF692Q9BU19 519 aaPredicted RBP17.1■□□□□ 0.33
SNPH-201ENST00000381867 GPATCH8Q9UKJ3 1502 aaKnown RBP17.09■□□□□ 0.33
SNPH-201ENST00000381867 DHX29Q7Z478 1369 aaKnown RBP17.09■□□□□ 0.33
SNPH-201ENST00000381867 TSR1Q2NL82 804 aaKnown RBP17.09■□□□□ 0.33
SNPH-201ENST00000381867 ASXL2Q76L83 1435 aa17.08■□□□□ 0.33
SNPH-201ENST00000381867 TEX35Q5T0J7 233 aa17.08■□□□□ 0.33
SNPH-201ENST00000381867 FAM184AQ8NB25 1140 aa17.08■□□□□ 0.33
SNPH-201ENST00000381867 ZNF592Q92610 1267 aa17.08■□□□□ 0.33
SNPH-201ENST00000381867 PBRM1Q86U86 1689 aa17.08■□□□□ 0.32
SNPH-201ENST00000381867 BRD4O60885 1362 aaPredicted RBP17.08■□□□□ 0.32
SNPH-201ENST00000381867 NUP153P49790 1475 aaKnown RBP17.08■□□□□ 0.32
SNPH-201ENST00000381867 TEFQ10587 303 aa17.08■□□□□ 0.32
SNPH-201ENST00000381867 CCDC70Q6NSX1 233 aa17.08■□□□□ 0.32
SNPH-201ENST00000381867 ATAD2Q6PL18 1390 aa17.08■□□□□ 0.32
SNPH-201ENST00000381867 MSH5O43196 834 aa17.08■□□□□ 0.32
SNPH-201ENST00000381867 TPM1P09493 284 aa17.07■□□□□ 0.32
SNPH-201ENST00000381867 TPD52L1Q16890 204 aaPredicted RBP17.07■□□□□ 0.32
SNPH-201ENST00000381867 TMEM132EQ6IEE7 984 aa17.07■□□□□ 0.32
SNPH-201ENST00000381867 CEP89Q96ST8 783 aa17.07■□□□□ 0.32
SNPH-201ENST00000381867 RILPL2Q969X0 211 aa17.07■□□□□ 0.32
SNPH-201ENST00000381867 PROSER2Q86WR7 435 aaPredicted RBP17.07■□□□□ 0.32
SNPH-201ENST00000381867 ABCA5Q8WWZ7 1642 aa17.07■□□□□ 0.32
SNPH-201ENST00000381867 RUNDC1Q96C34 613 aa17.06■□□□□ 0.32
SNPH-201ENST00000381867 FOXD4L6Q3SYB3 417 aaPredicted RBP17.06■□□□□ 0.32
SNPH-201ENST00000381867 FOXD4L3Q6VB84 417 aaPredicted RBP17.06■□□□□ 0.32
SNPH-201ENST00000381867 RRP7AQ9Y3A4 280 aaKnown RBP17.06■□□□□ 0.32
SNPH-201ENST00000381867 COG6Q9Y2V7 657 aa17.05■□□□□ 0.32
SNPH-201ENST00000381867 REC8O95072 547 aa17.05■□□□□ 0.32
SNPH-201ENST00000381867 PDE4CQ08493 712 aa17.05■□□□□ 0.32
SNPH-201ENST00000381867 PES1O00541 588 aaKnown RBP17.04■□□□□ 0.32
SNPH-201ENST00000381867 PRAM1Q96QH2 718 aa17.04■□□□□ 0.32
SNPH-201ENST00000381867 BCL2L13Q9BXK5 485 aa17.04■□□□□ 0.32
SNPH-201ENST00000381867 CABP2Q9NPB3 220 aa17.04■□□□□ 0.32
SNPH-201ENST00000381867 FAM135AQ9P2D6 1515 aa17.04■□□□□ 0.32
SNPH-201ENST00000381867 DUOX2Q9NRD8 1548 aa17.04■□□□□ 0.32
SNPH-201ENST00000381867 TOMM22Q9NS69 142 aa17.03■□□□□ 0.32
SNPH-201ENST00000381867 ZNF518AQ6AHZ1 1483 aa17.03■□□□□ 0.32
SNPH-201ENST00000381867 MEX3CQ5U5Q3 659 aaKnown RBP17.03■□□□□ 0.32
SNPH-201ENST00000381867 TTC5Q8N0Z6 440 aa17.03■□□□□ 0.32
SNPH-201ENST00000381867 RTEL1-TNFRSF6BF6WH68 1400 aa17.02■□□□□ 0.32
SNPH-201ENST00000381867 NFKBIBQ15653 356 aa17.02■□□□□ 0.31
SNPH-201ENST00000381867 ABCC2Q92887 1545 aa17.02■□□□□ 0.31
SNPH-201ENST00000381867 DDX19BQ9UMR2 479 aa17.01■□□□□ 0.31
SNPH-201ENST00000381867 TPM2P07951 284 aa17.01■□□□□ 0.31
SNPH-201ENST00000381867 NUCB2P80303 420 aa17.01■□□□□ 0.31
SNPH-201ENST00000381867 RAPGEF4Q8WZA2 1011 aa17.01■□□□□ 0.31
SNPH-201ENST00000381867 MTERF4Q7Z6M4 381 aaKnown RBP17■□□□□ 0.31
SNPH-201ENST00000381867 SMG6Q86US8 1419 aaKnown RBP17■□□□□ 0.31
SNPH-201ENST00000381867 MRE11P49959 708 aa17■□□□□ 0.31
SNPH-201ENST00000381867 GNAI1P63096 354 aa17■□□□□ 0.31
SNPH-201ENST00000381867 MAP7D2Q96T17 732 aa17■□□□□ 0.31
SNPH-201ENST00000381867 NLRP6P59044 892 aa16.99■□□□□ 0.31
SNPH-201ENST00000381867 DIAPH3Q9NSV4 1193 aa16.99■□□□□ 0.31
SNPH-201ENST00000381867 HOMER1Q86YM7 354 aa16.99■□□□□ 0.31
SNPH-201ENST00000381867 RUFY2Q8WXA3 655 aa16.99■□□□□ 0.31
SNPH-201ENST00000381867 CFAP43Q8NDM7 1665 aa16.99■□□□□ 0.31
SNPH-201ENST00000381867 MCTP1Q6DN14 999 aa16.98■□□□□ 0.31
SNPH-201ENST00000381867 ABCC10Q5T3U5 1492 aa16.98■□□□□ 0.31
SNPH-201ENST00000381867 CDK19Q9BWU1 502 aa16.97■□□□□ 0.31
SNPH-201ENST00000381867 API5Q9BZZ5 524 aaKnown RBP16.97■□□□□ 0.31
SNPH-201ENST00000381867 ARGLU1Q9NWB6 273 aaPredicted RBP16.97■□□□□ 0.31
SNPH-201ENST00000381867 KDM5BQ9UGL1 1544 aa16.97■□□□□ 0.31
SNPH-201ENST00000381867 IPO7O95373 1038 aaKnown RBP16.97■□□□□ 0.31
SNPH-201ENST00000381867 ZKSCAN1P17029 563 aaPredicted RBP16.97■□□□□ 0.31
SNPH-201ENST00000381867 AAMPQ13685 434 aa16.97■□□□□ 0.31
SNPH-201ENST00000381867 NBPF1Q3BBV0 1214 aa16.97■□□□□ 0.31
SNPH-201ENST00000381867 TCOF1Q13428 1488 aaKnown RBP16.97■□□□□ 0.31
SNPH-201ENST00000381867 MARCH6O60337 910 aa16.97■□□□□ 0.31
SNPH-201ENST00000381867 RIPK4P57078 832 aa16.97■□□□□ 0.31
SNPH-201ENST00000381867 SHANK2Q9UPX8 1470 aa16.97■□□□□ 0.31
SNPH-201ENST00000381867 APAF1O14727 1248 aa16.96■□□□□ 0.31
SNPH-201ENST00000381867 NEXNQ0ZGT2 675 aa16.96■□□□□ 0.31
SNPH-201ENST00000381867 GGNBP2Q9H3C7 697 aa16.96■□□□□ 0.31
SNPH-201ENST00000381867 CCDC39Q9UFE4 941 aa16.96■□□□□ 0.31
SNPH-201ENST00000381867 DDX58O95786 925 aaKnown RBP16.95■□□□□ 0.3
SNPH-201ENST00000381867 ESCO1Q5FWF5 840 aa16.95■□□□□ 0.3
SNPH-201ENST00000381867 BICD2Q8TD16 824 aa16.95■□□□□ 0.3
SNPH-201ENST00000381867 GAS2L2Q8NHY3 880 aa16.95■□□□□ 0.3
SNPH-201ENST00000381867 ELL2O00472 640 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms