RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 NSD3Q9BZ95 1437 aa25.79■■□□□ 1.72
GMDS-201ENST00000380805 ANKRD36BQ8N2N9 1353 aa25.78■■□□□ 1.72
GMDS-201ENST00000380805 KNDC1Q76NI1 1749 aa25.78■■□□□ 1.72
GMDS-201ENST00000380805 RNF123Q5XPI4 1314 aa25.78■■□□□ 1.72
GMDS-201ENST00000380805 PELP1Q8IZL8 1130 aaKnown RBP25.77■■□□□ 1.72
GMDS-201ENST00000380805 PDE3BQ13370 1112 aa25.77■■□□□ 1.72
GMDS-201ENST00000380805 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.75■■□□□ 1.71
GMDS-201ENST00000380805 SLC12A5Q9H2X9 1139 aa25.74■■□□□ 1.71
GMDS-201ENST00000380805 NLRP1Q9C000 1473 aa25.74■■□□□ 1.71
GMDS-201ENST00000380805 NSD2O96028 1365 aa25.74■■□□□ 1.71
GMDS-201ENST00000380805 ATAD2Q6PL18 1390 aa25.73■■□□□ 1.71
GMDS-201ENST00000380805 ABCC11Q96J66 1382 aa25.72■■□□□ 1.71
GMDS-201ENST00000380805 CEP170BQ9Y4F5 1589 aaPredicted RBP25.7■■□□□ 1.71
GMDS-201ENST00000380805 POLR3AO14802 1390 aaPredicted RBP25.7■■□□□ 1.7
GMDS-201ENST00000380805 BCANQ96GW7 911 aa25.7■■□□□ 1.7
GMDS-201ENST00000380805 PRAM1Q96QH2 718 aa25.69■■□□□ 1.7
GMDS-201ENST00000380805 STK26Q9P289 416 aa25.69■■□□□ 1.7
GMDS-201ENST00000380805 ANKRD26Q9UPS8 1709 aa25.69■■□□□ 1.7
GMDS-201ENST00000380805 TECPR2O15040 1411 aa25.69■■□□□ 1.7
GMDS-201ENST00000380805 ADAMTS8Q9UP79 889 aa25.68■■□□□ 1.7
GMDS-201ENST00000380805 AEBP2Q6ZN18 517 aaPredicted RBP25.68■■□□□ 1.7
GMDS-201ENST00000380805 TMEM2Q9UHN6 1383 aa25.67■■□□□ 1.7
GMDS-201ENST00000380805 SHPRHQ149N8 1683 aa25.67■■□□□ 1.7
GMDS-201ENST00000380805 CGNL1Q0VF96 1302 aa25.67■■□□□ 1.7
GMDS-201ENST00000380805 ZNF142P52746 1687 aaPredicted RBP25.67■■□□□ 1.7
GMDS-201ENST00000380805 CPS1P31327 1500 aa25.66■■□□□ 1.7
GMDS-201ENST00000380805 HDGFP51858 240 aaKnown RBP25.66■■□□□ 1.7
GMDS-201ENST00000380805 WDR43Q15061 677 aaKnown RBP eCLIP25.66■■□□□ 1.7
GMDS-201ENST00000380805 CABP2Q9NPB3 220 aa25.66■■□□□ 1.7
GMDS-201ENST00000380805 LMTK3Q96Q04 1460 aa25.65■■□□□ 1.7
GMDS-201ENST00000380805 CD163L1Q9NR16 1453 aa25.65■■□□□ 1.7
GMDS-201ENST00000380805 HSPA2P54652 639 aa25.64■■□□□ 1.7
GMDS-201ENST00000380805 POGKQ9P215 609 aa25.64■■□□□ 1.7
GMDS-201ENST00000380805 MED14O60244 1454 aa25.64■■□□□ 1.69
GMDS-201ENST00000380805 A0A1W2PP64 1363 aa25.63■■□□□ 1.69
GMDS-201ENST00000380805 FAM135BQ49AJ0 1406 aa25.63■■□□□ 1.69
GMDS-201ENST00000380805 THEMISQ8N1K5 641 aaPredicted RBP25.62■■□□□ 1.69
GMDS-201ENST00000380805 SIRT1Q96EB6 747 aa25.62■■□□□ 1.69
GMDS-201ENST00000380805 MINK1Q8N4C8 1332 aaPredicted RBP25.6■■□□□ 1.69
GMDS-201ENST00000380805 SAFB2Q14151 953 aaKnown RBP eCLIP25.6■■□□□ 1.69
GMDS-201ENST00000380805 METP08581 1390 aa25.6■■□□□ 1.69
GMDS-201ENST00000380805 SLIT1O75093 1534 aa25.6■■□□□ 1.69
GMDS-201ENST00000380805 SRPK2P78362 688 aaKnown RBP25.59■■□□□ 1.69
GMDS-201ENST00000380805 IRX6P78412 446 aaPredicted RBP25.59■■□□□ 1.69
GMDS-201ENST00000380805 MORC1Q86VD1 984 aa25.59■■□□□ 1.69
GMDS-201ENST00000380805 ZNF521Q96K83 1311 aa25.58■■□□□ 1.69
GMDS-201ENST00000380805 ARHGAP23Q9P227 1491 aa25.58■■□□□ 1.69
GMDS-201ENST00000380805 PPP4R2Q9NY27 417 aa25.58■■□□□ 1.69
GMDS-201ENST00000380805 ATP7BP35670 1465 aa25.58■■□□□ 1.68
GMDS-201ENST00000380805 ADAMTS13Q76LX8 1427 aa25.57■■□□□ 1.68
GMDS-201ENST00000380805 PLEKHG1Q9ULL1 1385 aa25.57■■□□□ 1.68
GMDS-201ENST00000380805 KIF20BQ96Q89 1820 aa25.57■■□□□ 1.68
GMDS-201ENST00000380805 SENP3-EIF4A1A0A087X0R7 540 aa25.57■■□□□ 1.68
GMDS-201ENST00000380805 PLEKHH1Q9ULM0 1364 aa25.56■■□□□ 1.68
GMDS-201ENST00000380805 CDK19Q9BWU1 502 aa25.54■■□□□ 1.68
GMDS-201ENST00000380805 SENP3Q9H4L4 574 aaPredicted RBP25.54■■□□□ 1.68
GMDS-201ENST00000380805 TERF2IPQ9NYB0 399 aa25.54■■□□□ 1.68
GMDS-201ENST00000380805 ADGRB2O60241 1585 aa25.54■■□□□ 1.68
GMDS-201ENST00000380805 LTKP29376 864 aa25.54■■□□□ 1.68
GMDS-201ENST00000380805 NGEFQ8N5V2 710 aa25.54■■□□□ 1.68
GMDS-201ENST00000380805 TXNDC2Q86VQ3 553 aa25.5■■□□□ 1.67
GMDS-201ENST00000380805 CDCA7LQ96GN5 454 aa25.5■■□□□ 1.67
GMDS-201ENST00000380805 SALL2Q9Y467 1007 aaPredicted RBP25.5■■□□□ 1.67
GMDS-201ENST00000380805 WAPLQ7Z5K2 1190 aa25.49■■□□□ 1.67
GMDS-201ENST00000380805 RCAN3Q9UKA8 241 aa25.49■■□□□ 1.67
GMDS-201ENST00000380805 NCKAP5LQ9HCH0 1330 aa25.48■■□□□ 1.67
GMDS-201ENST00000380805 DIP2AQ14689 1571 aa25.48■■□□□ 1.67
GMDS-201ENST00000380805 ANKLE2Q86XL3 938 aa25.47■■□□□ 1.67
GMDS-201ENST00000380805 MON2Q7Z3U7 1717 aa25.46■■□□□ 1.67
GMDS-201ENST00000380805 HDGFL2Q7Z4V5 671 aaPredicted RBP25.46■■□□□ 1.67
GMDS-201ENST00000380805 IQSEC2Q5JU85 1478 aa25.46■■□□□ 1.67
GMDS-201ENST00000380805 EID1Q9Y6B2 187 aa25.46■■□□□ 1.67
GMDS-201ENST00000380805 CPSF1Q10570 1443 aaKnown RBP25.45■■□□□ 1.67
GMDS-201ENST00000380805 RRP1P56182 461 aaKnown RBP25.45■■□□□ 1.66
GMDS-201ENST00000380805 CDC42BPGQ6DT37 1551 aa25.45■■□□□ 1.66
GMDS-201ENST00000380805 AKAP12Q02952 1782 aa25.45■■□□□ 1.66
GMDS-201ENST00000380805 COL3A1P02461 1466 aaPredicted RBP25.44■■□□□ 1.66
GMDS-201ENST00000380805 WASLO00401 505 aaPredicted RBP25.44■■□□□ 1.66
GMDS-201ENST00000380805 MTHFSP49914 203 aa25.43■■□□□ 1.66
GMDS-201ENST00000380805 CFAP53Q96M91 514 aa25.43■■□□□ 1.66
GMDS-201ENST00000380805 FYB1O15117 783 aa25.43■■□□□ 1.66
GMDS-201ENST00000380805 CABP1Q9NZU7 370 aa25.43■■□□□ 1.66
GMDS-201ENST00000380805 STRCQ7RTU9 1775 aa25.43■■□□□ 1.66
GMDS-201ENST00000380805 TOPAZ1Q8N9V7 1692 aa25.42■■□□□ 1.66
GMDS-201ENST00000380805 TSHZ2Q9NRE2 1034 aa25.42■■□□□ 1.66
GMDS-201ENST00000380805 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.41■■□□□ 1.66
GMDS-201ENST00000380805 GOLGA2Q08379 1002 aa25.41■■□□□ 1.66
GMDS-201ENST00000380805 TRMT2AQ8IZ69 625 aaKnown RBP25.41■■□□□ 1.66
GMDS-201ENST00000380805 ITSN1Q15811 1721 aa25.41■■□□□ 1.66
GMDS-201ENST00000380805 ROBO2Q9HCK4 1378 aa25.41■■□□□ 1.66
GMDS-201ENST00000380805 DUSP27Q5VZP5 1158 aa25.4■■□□□ 1.66
GMDS-201ENST00000380805 APAF1O14727 1248 aa25.4■■□□□ 1.66
GMDS-201ENST00000380805 NCBP3Q53F19 620 aaKnown RBP25.4■■□□□ 1.66
GMDS-201ENST00000380805 TNNT2P45379 298 aaPredicted RBP25.39■■□□□ 1.65
GMDS-201ENST00000380805 CCDC146Q8IYE0 955 aa25.39■■□□□ 1.65
GMDS-201ENST00000380805 EDC4Q6P2E9 1401 aaKnown RBP25.39■■□□□ 1.65
GMDS-201ENST00000380805 PPIP5K1Q6PFW1 1433 aa25.39■■□□□ 1.65
GMDS-201ENST00000380805 SLFN5Q08AF3 891 aa25.37■■□□□ 1.65
GMDS-201ENST00000380805 PTCH1Q13635 1447 aa25.37■■□□□ 1.65
GMDS-201ENST00000380805 PTPRUQ92729 1446 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms