RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 DCAF11Q8TEB1 546 aa10.79□□□□□ -0.68
CDKL5-202ENST00000379996 ARHGEF28Q8N1W1 1705 aaKnown RBP10.79□□□□□ -0.68
CDKL5-202ENST00000379996 NWD1Q149M9 1564 aa10.79□□□□□ -0.68
CDKL5-202ENST00000379996 CPS1P31327 1500 aa10.79□□□□□ -0.68
CDKL5-202ENST00000379996 XRN1Q8IZH2 1706 aaKnown RBP10.79□□□□□ -0.68
CDKL5-202ENST00000379996 WASHC2AQ641Q2 1341 aa10.79□□□□□ -0.68
CDKL5-202ENST00000379996 SPRYD3Q8NCJ5 442 aa10.78□□□□□ -0.68
CDKL5-202ENST00000379996 TECPR2O15040 1411 aa10.78□□□□□ -0.68
CDKL5-202ENST00000379996 C14orf93Q9H972 538 aaKnown RBP10.78□□□□□ -0.68
CDKL5-202ENST00000379996 TULP1O00294 542 aaPredicted RBP10.78□□□□□ -0.68
CDKL5-202ENST00000379996 ADAMTS13Q76LX8 1427 aa10.78□□□□□ -0.68
CDKL5-202ENST00000379996 PIK3R4Q99570 1358 aa10.77□□□□□ -0.68
CDKL5-202ENST00000379996 STRCQ7RTU9 1775 aa10.77□□□□□ -0.69
CDKL5-202ENST00000379996 ADGRF5Q8IZF2 1346 aa10.77□□□□□ -0.69
CDKL5-202ENST00000379996 CHD2O14647 1828 aaKnown RBP10.76□□□□□ -0.69
CDKL5-202ENST00000379996 HIRIP3Q9BW71 556 aaPredicted RBP10.76□□□□□ -0.69
CDKL5-202ENST00000379996 RGL3Q3MIN7 710 aa10.75□□□□□ -0.69
CDKL5-202ENST00000379996 SBNO2Q9Y2G9 1366 aa10.75□□□□□ -0.69
CDKL5-202ENST00000379996 ZNF326Q5BKZ1 582 aaKnown RBP10.74□□□□□ -0.69
CDKL5-202ENST00000379996 ADGRB2O60241 1585 aa10.74□□□□□ -0.69
CDKL5-202ENST00000379996 BBXQ8WY36 941 aaPredicted RBP10.74□□□□□ -0.69
CDKL5-202ENST00000379996 ROCK2O75116 1388 aaKnown RBP10.74□□□□□ -0.69
CDKL5-202ENST00000379996 SIRT1Q96EB6 747 aa10.73□□□□□ -0.69
CDKL5-202ENST00000379996 STAG3Q9UJ98 1225 aa10.73□□□□□ -0.69
CDKL5-202ENST00000379996 QRICH2Q9H0J4 1663 aa10.73□□□□□ -0.69
CDKL5-202ENST00000379996 PTCH1Q13635 1447 aa10.73□□□□□ -0.69
CDKL5-202ENST00000379996 FAM135BQ49AJ0 1406 aa10.73□□□□□ -0.69
CDKL5-202ENST00000379996 NPHP4O75161 1426 aaPredicted RBP10.72□□□□□ -0.69
CDKL5-202ENST00000379996 LRPPRCP42704 1394 aaKnown RBP10.72□□□□□ -0.69
CDKL5-202ENST00000379996 EID1Q9Y6B2 187 aa10.72□□□□□ -0.69
CDKL5-202ENST00000379996 EIF3AQ14152 1382 aaKnown RBP10.72□□□□□ -0.69
CDKL5-202ENST00000379996 CCDC7Q96M83 1385 aa10.72□□□□□ -0.69
CDKL5-202ENST00000379996 HSPA5P11021 654 aaKnown RBP10.72□□□□□ -0.69
CDKL5-202ENST00000379996 ABCC11Q96J66 1382 aa10.71□□□□□ -0.69
CDKL5-202ENST00000379996 C11orf95C9JLR9 678 aaPredicted RBP10.71□□□□□ -0.69
CDKL5-202ENST00000379996 LTKP29376 864 aa10.71□□□□□ -0.69
CDKL5-202ENST00000379996 NBR1Q14596 966 aa10.71□□□□□ -0.69
CDKL5-202ENST00000379996 TBX22Q9Y458 520 aa10.71□□□□□ -0.69
CDKL5-202ENST00000379996 YTHDC2Q9H6S0 1430 aaKnown RBP10.71□□□□□ -0.7
CDKL5-202ENST00000379996 USP47Q96K76 1375 aa10.7□□□□□ -0.7
CDKL5-202ENST00000379996 ANKLE2Q86XL3 938 aa10.7□□□□□ -0.7
CDKL5-202ENST00000379996 NKTRP30414 1462 aaKnown RBP10.69□□□□□ -0.7
CDKL5-202ENST00000379996 TXNDC2Q86VQ3 553 aa10.69□□□□□ -0.7
CDKL5-202ENST00000379996 ANP32CO43423 234 aa10.68□□□□□ -0.7
CDKL5-202ENST00000379996 CFAP70Q5T0N1 1121 aa10.68□□□□□ -0.7
CDKL5-202ENST00000379996 EIF4G2P78344 907 aaKnown RBP eCLIP10.67□□□□□ -0.7
CDKL5-202ENST00000379996 RNF25Q96BH1 459 aaPredicted RBP10.67□□□□□ -0.7
CDKL5-202ENST00000379996 NBPF1Q3BBV0 1214 aa10.67□□□□□ -0.7
CDKL5-202ENST00000379996 PTPRUQ92729 1446 aa10.67□□□□□ -0.7
CDKL5-202ENST00000379996 METP08581 1390 aa10.67□□□□□ -0.7
CDKL5-202ENST00000379996 CARD11Q9BXL7 1154 aa10.67□□□□□ -0.7
CDKL5-202ENST00000379996 NCOA3Q9Y6Q9 1424 aa10.67□□□□□ -0.7
CDKL5-202ENST00000379996 PUS7Q96PZ0 661 aaKnown RBP10.66□□□□□ -0.7
CDKL5-202ENST00000379996 STRCP1A6NGW2 1772 aa10.65□□□□□ -0.7
CDKL5-202ENST00000379996 MYOM1P52179 1685 aa10.65□□□□□ -0.71
CDKL5-202ENST00000379996 TOPAZ1Q8N9V7 1692 aa10.64□□□□□ -0.71
CDKL5-202ENST00000379996 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.64□□□□□ -0.71
CDKL5-202ENST00000379996 TESK2Q96S53 571 aa10.64□□□□□ -0.71
CDKL5-202ENST00000379996 CDC42BPGQ6DT37 1551 aa10.63□□□□□ -0.71
CDKL5-202ENST00000379996 KIF7Q2M1P5 1343 aa10.63□□□□□ -0.71
CDKL5-202ENST00000379996 TULP4Q9NRJ4 1543 aa10.63□□□□□ -0.71
CDKL5-202ENST00000379996 CCDC184Q52MB2 194 aa10.63□□□□□ -0.71
CDKL5-202ENST00000379996 RNF39Q9H2S5 420 aa10.63□□□□□ -0.71
CDKL5-202ENST00000379996 NALCNQ8IZF0 1738 aa10.62□□□□□ -0.71
CDKL5-202ENST00000379996 FMN2Q9NZ56 1722 aa10.62□□□□□ -0.71
CDKL5-202ENST00000379996 XIRP1Q702N8 1843 aaKnown RBP10.61□□□□□ -0.71
CDKL5-202ENST00000379996 PRKRIP1Q9H875 184 aaPredicted RBP10.61□□□□□ -0.71
CDKL5-202ENST00000379996 ITSN1Q15811 1721 aa10.61□□□□□ -0.71
CDKL5-202ENST00000379996 CENPJQ9HC77 1338 aaPredicted RBP10.6□□□□□ -0.71
CDKL5-202ENST00000379996 NUTM2DQ5VT03 806 aaPredicted RBP10.6□□□□□ -0.71
CDKL5-202ENST00000379996 USP32Q8NFA0 1604 aa10.6□□□□□ -0.71
CDKL5-202ENST00000379996 NCKAP5LQ9HCH0 1330 aa10.6□□□□□ -0.71
CDKL5-202ENST00000379996 ROBO2Q9HCK4 1378 aa10.59□□□□□ -0.71
CDKL5-202ENST00000379996 KCNA6P17658 529 aa10.59□□□□□ -0.71
CDKL5-202ENST00000379996 NINLQ9Y2I6 1382 aa10.59□□□□□ -0.71
CDKL5-202ENST00000379996 DCCP43146 1447 aa10.59□□□□□ -0.71
CDKL5-202ENST00000379996 ST20-MTHFSA0A0A6YYL1 179 aa10.58□□□□□ -0.72
CDKL5-202ENST00000379996 NKX1-1Q15270 411 aaPredicted RBP10.57□□□□□ -0.72
CDKL5-202ENST00000379996 TMEM132EQ6IEE7 984 aa10.57□□□□□ -0.72
CDKL5-202ENST00000379996 ANKARQ7Z5J8 1434 aa10.57□□□□□ -0.72
CDKL5-202ENST00000379996 ADGRL3Q9HAR2 1447 aa10.57□□□□□ -0.72
CDKL5-202ENST00000379996 AKAP12Q02952 1782 aa10.57□□□□□ -0.72
CDKL5-202ENST00000379996 CDCA8Q53HL2 280 aa10.56□□□□□ -0.72
CDKL5-202ENST00000379996 LTBP4Q8N2S1 1624 aa10.56□□□□□ -0.72
CDKL5-202ENST00000379996 DISP3Q9P2K9 1392 aa10.56□□□□□ -0.72
CDKL5-202ENST00000379996 MYT1Q01538 1121 aa10.56□□□□□ -0.72
CDKL5-202ENST00000379996 TMF1P82094 1093 aa10.56□□□□□ -0.72
CDKL5-202ENST00000379996 AMOTL2Q9Y2J4 779 aa10.56□□□□□ -0.72
CDKL5-202ENST00000379996 STK25O00506 426 aa10.55□□□□□ -0.72
CDKL5-202ENST00000379996 IQSEC2Q5JU85 1478 aa10.55□□□□□ -0.72
CDKL5-202ENST00000379996 ZBED9Q6R2W3 1325 aa10.55□□□□□ -0.72
CDKL5-202ENST00000379996 USP54Q70EL1 1684 aa10.55□□□□□ -0.72
CDKL5-202ENST00000379996 MON2Q7Z3U7 1717 aa10.55□□□□□ -0.72
CDKL5-202ENST00000379996 PLEKHH1Q9ULM0 1364 aa10.55□□□□□ -0.72
CDKL5-202ENST00000379996 SLC26A8Q96RN1 970 aa10.54□□□□□ -0.72
CDKL5-202ENST00000379996 TRAK1Q9UPV9 953 aa10.54□□□□□ -0.72
CDKL5-202ENST00000379996 KIF1AQ12756 1690 aa10.54□□□□□ -0.72
CDKL5-202ENST00000379996 ATP7BP35670 1465 aa10.54□□□□□ -0.72
CDKL5-202ENST00000379996 LRRC7Q96NW7 1537 aa10.54□□□□□ -0.72
CDKL5-202ENST00000379996 NRKQ7Z2Y5 1582 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms