RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 LRRC7Q96NW7 1537 aa19.69■□□□□ 0.74
HERPUD1-203ENST00000379792 TMF1P82094 1093 aa19.68■□□□□ 0.74
HERPUD1-203ENST00000379792 FAM135BQ49AJ0 1406 aa19.67■□□□□ 0.74
HERPUD1-203ENST00000379792 CHD2O14647 1828 aaKnown RBP19.67■□□□□ 0.74
HERPUD1-203ENST00000379792 KIF7Q2M1P5 1343 aa19.67■□□□□ 0.74
HERPUD1-203ENST00000379792 QRICH2Q9H0J4 1663 aa19.67■□□□□ 0.74
HERPUD1-203ENST00000379792 KNDC1Q76NI1 1749 aa19.67■□□□□ 0.74
HERPUD1-203ENST00000379792 XRN1Q8IZH2 1706 aaKnown RBP19.67■□□□□ 0.74
HERPUD1-203ENST00000379792 UBAP1LF5GYI3 381 aa19.66■□□□□ 0.74
HERPUD1-203ENST00000379792 CCDC7Q96M83 1385 aa19.66■□□□□ 0.74
HERPUD1-203ENST00000379792 NWD1Q149M9 1564 aa19.64■□□□□ 0.74
HERPUD1-203ENST00000379792 PTCH1Q13635 1447 aa19.64■□□□□ 0.73
HERPUD1-203ENST00000379792 SBNO2Q9Y2G9 1366 aa19.64■□□□□ 0.73
HERPUD1-203ENST00000379792 PROSER2Q86WR7 435 aaPredicted RBP19.63■□□□□ 0.73
HERPUD1-203ENST00000379792 TOM1O60784 492 aa19.62■□□□□ 0.73
HERPUD1-203ENST00000379792 DDX10Q13206 875 aaKnown RBP19.62■□□□□ 0.73
HERPUD1-203ENST00000379792 NKTRP30414 1462 aaKnown RBP19.61■□□□□ 0.73
HERPUD1-203ENST00000379792 CABP2Q9NPB3 220 aa19.61■□□□□ 0.73
HERPUD1-203ENST00000379792 EVC2Q86UK5 1308 aa19.61■□□□□ 0.73
HERPUD1-203ENST00000379792 SLC24A1O60721 1099 aa19.6■□□□□ 0.73
HERPUD1-203ENST00000379792 CDK19Q9BWU1 502 aa19.6■□□□□ 0.73
HERPUD1-203ENST00000379792 TULP4Q9NRJ4 1543 aa19.6■□□□□ 0.73
HERPUD1-203ENST00000379792 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.59■□□□□ 0.73
HERPUD1-203ENST00000379792 SRPK2P78362 688 aaKnown RBP19.59■□□□□ 0.73
HERPUD1-203ENST00000379792 XIRP1Q702N8 1843 aaKnown RBP19.58■□□□□ 0.73
HERPUD1-203ENST00000379792 C14orf37Q86TY3 774 aa19.58■□□□□ 0.73
HERPUD1-203ENST00000379792 WASLO00401 505 aaPredicted RBP19.57■□□□□ 0.72
HERPUD1-203ENST00000379792 CDCA8Q53HL2 280 aa19.57■□□□□ 0.72
HERPUD1-203ENST00000379792 TMEM94Q12767 1356 aa19.56■□□□□ 0.72
HERPUD1-203ENST00000379792 NUTM2FA1L443 756 aa19.55■□□□□ 0.72
HERPUD1-203ENST00000379792 NCOA3Q9Y6Q9 1424 aa19.53■□□□□ 0.72
HERPUD1-203ENST00000379792 TMC1Q8TDI8 760 aa19.52■□□□□ 0.72
HERPUD1-203ENST00000379792 PIP4K2BP78356 416 aa19.5■□□□□ 0.71
HERPUD1-203ENST00000379792 NUDT16Q96DE0 195 aaKnown RBP19.5■□□□□ 0.71
HERPUD1-203ENST00000379792 SLC12A5Q9H2X9 1139 aa19.5■□□□□ 0.71
HERPUD1-203ENST00000379792 ADGRL3Q9HAR2 1447 aa19.5■□□□□ 0.71
HERPUD1-203ENST00000379792 DIEXFQ68CQ4 756 aaKnown RBP19.49■□□□□ 0.71
HERPUD1-203ENST00000379792 PUS7Q96PZ0 661 aaKnown RBP19.49■□□□□ 0.71
HERPUD1-203ENST00000379792 PRR36Q9H6K5 1346 aa19.49■□□□□ 0.71
HERPUD1-203ENST00000379792 ADGRB2O60241 1585 aa19.49■□□□□ 0.71
HERPUD1-203ENST00000379792 NALCNQ8IZF0 1738 aa19.49■□□□□ 0.71
HERPUD1-203ENST00000379792 SCAF1Q9H7N4 1312 aaKnown RBP19.49■□□□□ 0.71
HERPUD1-203ENST00000379792 C19orf44Q9H6X5 657 aa19.48■□□□□ 0.71
HERPUD1-203ENST00000379792 PANK3Q9H999 370 aa19.47■□□□□ 0.71
HERPUD1-203ENST00000379792 MSH6P52701 1360 aa19.47■□□□□ 0.71
HERPUD1-203ENST00000379792 CABP1Q9NZU7 370 aa19.47■□□□□ 0.71
HERPUD1-203ENST00000379792 ATAD2Q6PL18 1390 aa19.46■□□□□ 0.71
HERPUD1-203ENST00000379792 CCDC61Q9Y6R9 512 aa19.44■□□□□ 0.7
HERPUD1-203ENST00000379792 MYOM1P52179 1685 aa19.43■□□□□ 0.7
HERPUD1-203ENST00000379792 ATP7BP35670 1465 aa19.43■□□□□ 0.7
HERPUD1-203ENST00000379792 ATF3P18847 181 aa19.42■□□□□ 0.7
HERPUD1-203ENST00000379792 CDC42BPGQ6DT37 1551 aa19.42■□□□□ 0.7
HERPUD1-203ENST00000379792 HSPA1LP34931 641 aa19.42■□□□□ 0.7
HERPUD1-203ENST00000379792 PPIP5K1Q6PFW1 1433 aa19.42■□□□□ 0.7
HERPUD1-203ENST00000379792 CNGB1Q14028 1251 aaPredicted RBP19.41■□□□□ 0.7
HERPUD1-203ENST00000379792 PMFBP1Q8TBY8 1022 aa19.4■□□□□ 0.7
HERPUD1-203ENST00000379792 CARD14Q9BXL6 1004 aa19.4■□□□□ 0.7
HERPUD1-203ENST00000379792 FMN2Q9NZ56 1722 aa19.4■□□□□ 0.7
HERPUD1-203ENST00000379792 USP32Q8NFA0 1604 aa19.4■□□□□ 0.7
HERPUD1-203ENST00000379792 PER1O15534 1290 aaPredicted RBP19.38■□□□□ 0.69
HERPUD1-203ENST00000379792 CADPS2Q86UW7 1296 aa19.38■□□□□ 0.69
HERPUD1-203ENST00000379792 ANKARQ7Z5J8 1434 aa19.38■□□□□ 0.69
HERPUD1-203ENST00000379792 NINLQ9Y2I6 1382 aa19.38■□□□□ 0.69
HERPUD1-203ENST00000379792 ESCO1Q5FWF5 840 aa19.37■□□□□ 0.69
HERPUD1-203ENST00000379792 ORAI2Q96SN7 254 aa19.37■□□□□ 0.69
HERPUD1-203ENST00000379792 TERF2IPQ9NYB0 399 aa19.37■□□□□ 0.69
HERPUD1-203ENST00000379792 SLAIN2Q9P270 581 aa19.37■□□□□ 0.69
HERPUD1-203ENST00000379792 DCCP43146 1447 aa19.37■□□□□ 0.69
HERPUD1-203ENST00000379792 RGPD8O14715 1765 aaPredicted RBP19.36■□□□□ 0.69
HERPUD1-203ENST00000379792 A0A1W2PP64 1363 aa19.36■□□□□ 0.69
HERPUD1-203ENST00000379792 CD163L1Q9NR16 1453 aa19.36■□□□□ 0.69
HERPUD1-203ENST00000379792 PLEKHG3A1L390 1219 aa19.36■□□□□ 0.69
HERPUD1-203ENST00000379792 HDGFL2Q7Z4V5 671 aaPredicted RBP19.36■□□□□ 0.69
HERPUD1-203ENST00000379792 ANKRD36BQ8N2N9 1353 aa19.36■□□□□ 0.69
HERPUD1-203ENST00000379792 ACEP12821 1306 aa19.35■□□□□ 0.69
HERPUD1-203ENST00000379792 KNSTRNQ9Y448 316 aa19.35■□□□□ 0.69
HERPUD1-203ENST00000379792 ROBO1Q9Y6N7 1651 aa19.35■□□□□ 0.69
HERPUD1-203ENST00000379792 NGDNQ8NEJ9 315 aaKnown RBP19.34■□□□□ 0.69
HERPUD1-203ENST00000379792 PHF8Q9UPP1 1060 aa19.34■□□□□ 0.69
HERPUD1-203ENST00000379792 C1orf167Q5SNV9 1468 aa19.34■□□□□ 0.69
HERPUD1-203ENST00000379792 MST1RQ04912 1400 aa19.34■□□□□ 0.69
HERPUD1-203ENST00000379792 TOPAZ1Q8N9V7 1692 aa19.33■□□□□ 0.68
HERPUD1-203ENST00000379792 NSD3Q9BZ95 1437 aa19.33■□□□□ 0.68
HERPUD1-203ENST00000379792 CPSF1Q10570 1443 aaKnown RBP19.32■□□□□ 0.68
HERPUD1-203ENST00000379792 KTN1Q86UP2 1357 aaKnown RBP19.32■□□□□ 0.68
HERPUD1-203ENST00000379792 CC2D1BQ5T0F9 858 aaKnown RBP19.31■□□□□ 0.68
HERPUD1-203ENST00000379792 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.3■□□□□ 0.68
HERPUD1-203ENST00000379792 MIER1Q8N108 512 aa19.3■□□□□ 0.68
HERPUD1-203ENST00000379792 ZNF692Q9BU19 519 aaPredicted RBP19.29■□□□□ 0.68
HERPUD1-203ENST00000379792 ANP32CO43423 234 aa19.29■□□□□ 0.68
HERPUD1-203ENST00000379792 FOXO3O43524 673 aa19.29■□□□□ 0.68
HERPUD1-203ENST00000379792 AMER1Q5JTC6 1135 aaPredicted RBP19.29■□□□□ 0.68
HERPUD1-203ENST00000379792 ITSN1Q15811 1721 aa19.28■□□□□ 0.68
HERPUD1-203ENST00000379792 POLR3AO14802 1390 aaPredicted RBP19.28■□□□□ 0.68
HERPUD1-203ENST00000379792 XPCQ01831 940 aaPredicted RBP19.27■□□□□ 0.68
HERPUD1-203ENST00000379792 DDX17Q92841 729 aaKnown RBP19.27■□□□□ 0.68
HERPUD1-203ENST00000379792 PSME1Q06323 249 aa19.26■□□□□ 0.67
HERPUD1-203ENST00000379792 BRINP3Q76B58 766 aa19.26■□□□□ 0.67
HERPUD1-203ENST00000379792 CGNL1Q0VF96 1302 aa19.25■□□□□ 0.67
HERPUD1-203ENST00000379792 USP6P35125 1406 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms