RNA–Protein interactions for RNA: ENST00000379716.5

SH3KBP1-203, Transcript of SH3 domain containing kinase binding protein 1, humanhuman

TSL 2 BASIC

Gene SH3KBP1, Length 3,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1-203ENST00000379716 NAIPQ13075 1403 aa11.94□□□□□ -0.5
SH3KBP1-203ENST00000379716 TNNT3P45378 269 aaPredicted RBP11.93□□□□□ -0.5
SH3KBP1-203ENST00000379716 A2MP01023 1474 aa11.93□□□□□ -0.5
SH3KBP1-203ENST00000379716 CCDC27Q2M243 656 aa11.93□□□□□ -0.5
SH3KBP1-203ENST00000379716 DIP2BQ9P265 1576 aa11.92□□□□□ -0.5
SH3KBP1-203ENST00000379716 LOC102724159A0A0B4J2E5 919 aa11.92□□□□□ -0.5
SH3KBP1-203ENST00000379716 IRF6O14896 467 aa11.92□□□□□ -0.5
SH3KBP1-203ENST00000379716 PWP2Q15269 919 aaKnown RBP11.92□□□□□ -0.5
SH3KBP1-203ENST00000379716 ARHGEF12Q9NZN5 1544 aa11.92□□□□□ -0.5
SH3KBP1-203ENST00000379716 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.92□□□□□ -0.5
SH3KBP1-203ENST00000379716 HSP90AB3PQ58FF7 597 aa11.92□□□□□ -0.5
SH3KBP1-203ENST00000379716 STK26Q9P289 416 aa11.92□□□□□ -0.5
SH3KBP1-203ENST00000379716 HFM1A2PYH4 1435 aa11.91□□□□□ -0.5
SH3KBP1-203ENST00000379716 KDM6BO15054 1643 aa11.91□□□□□ -0.5
SH3KBP1-203ENST00000379716 SAFB2Q14151 953 aaKnown RBP eCLIP11.91□□□□□ -0.5
SH3KBP1-203ENST00000379716 SAMD9LQ8IVG5 1584 aa11.91□□□□□ -0.5
SH3KBP1-203ENST00000379716 TCERG1O14776 1098 aaKnown RBP11.9□□□□□ -0.5
SH3KBP1-203ENST00000379716 GTPBP4Q9BZE4 634 aaKnown RBP11.9□□□□□ -0.5
SH3KBP1-203ENST00000379716 EID1Q9Y6B2 187 aa11.9□□□□□ -0.5
SH3KBP1-203ENST00000379716 MTERF4Q7Z6M4 381 aaKnown RBP11.9□□□□□ -0.5
SH3KBP1-203ENST00000379716 MBD5Q9P267 1494 aa11.9□□□□□ -0.5
SH3KBP1-203ENST00000379716 ROCK1Q13464 1354 aa11.89□□□□□ -0.51
SH3KBP1-203ENST00000379716 ZNF500O60304 480 aaPredicted RBP11.89□□□□□ -0.51
SH3KBP1-203ENST00000379716 FOXD4L6Q3SYB3 417 aaPredicted RBP11.89□□□□□ -0.51
SH3KBP1-203ENST00000379716 FOXD4L3Q6VB84 417 aaPredicted RBP11.89□□□□□ -0.51
SH3KBP1-203ENST00000379716 HDGFP51858 240 aaKnown RBP11.89□□□□□ -0.51
SH3KBP1-203ENST00000379716 COL17A1Q9UMD9 1497 aaPredicted RBP11.89□□□□□ -0.51
SH3KBP1-203ENST00000379716 ABCA9Q8IUA7 1624 aa11.88□□□□□ -0.51
SH3KBP1-203ENST00000379716 TRIM6-TRIM34B2RNG4 842 aa11.88□□□□□ -0.51
SH3KBP1-203ENST00000379716 CC2D2BQ6DHV5 1058 aa11.88□□□□□ -0.51
SH3KBP1-203ENST00000379716 TRIM34Q9BYJ4 488 aa11.88□□□□□ -0.51
SH3KBP1-203ENST00000379716 CDC42BPAQ5VT25 1732 aa11.88□□□□□ -0.51
SH3KBP1-203ENST00000379716 CCDC144AA2RUR9 1427 aa11.88□□□□□ -0.51
SH3KBP1-203ENST00000379716 IRX5P78411 483 aaPredicted RBP11.88□□□□□ -0.51
SH3KBP1-203ENST00000379716 ARMCX6Q7L4S7 300 aa11.88□□□□□ -0.51
SH3KBP1-203ENST00000379716 ZNF513Q8N8E2 541 aaPredicted RBP11.88□□□□□ -0.51
SH3KBP1-203ENST00000379716 ATP10AO60312 1499 aa11.88□□□□□ -0.51
SH3KBP1-203ENST00000379716 ZSCAN20P17040 1043 aaPredicted RBP11.88□□□□□ -0.51
SH3KBP1-203ENST00000379716 PREX2Q70Z35 1606 aa11.87□□□□□ -0.51
SH3KBP1-203ENST00000379716 ATP7AQ04656 1500 aa11.87□□□□□ -0.51
SH3KBP1-203ENST00000379716 TCOF1Q13428 1488 aaKnown RBP11.87□□□□□ -0.51
SH3KBP1-203ENST00000379716 L3MBTL2Q969R5 705 aa11.87□□□□□ -0.51
SH3KBP1-203ENST00000379716 DHX57Q6P158 1386 aaKnown RBP11.87□□□□□ -0.51
SH3KBP1-203ENST00000379716 TNNT1P13805 278 aa11.86□□□□□ -0.51
SH3KBP1-203ENST00000379716 HSPA2P54652 639 aa11.86□□□□□ -0.51
SH3KBP1-203ENST00000379716 ZNF771Q7L3S4 317 aaPredicted RBP11.86□□□□□ -0.51
SH3KBP1-203ENST00000379716 PIK3R5Q8WYR1 880 aa11.86□□□□□ -0.51
SH3KBP1-203ENST00000379716 ABCC1P33527 1531 aa11.86□□□□□ -0.51
SH3KBP1-203ENST00000379716 ESPNB1AK53 854 aa11.86□□□□□ -0.51
SH3KBP1-203ENST00000379716 GEMIN8Q9NWZ8 242 aaKnown RBP11.86□□□□□ -0.51
SH3KBP1-203ENST00000379716 NBPF20Q3BBV1 942 aa11.85□□□□□ -0.51
SH3KBP1-203ENST00000379716 ZFYVE16Q7Z3T8 1539 aa11.85□□□□□ -0.51
SH3KBP1-203ENST00000379716 IDI1Q13907 227 aa11.85□□□□□ -0.51
SH3KBP1-203ENST00000379716 TXNDC2Q86VQ3 553 aa11.85□□□□□ -0.51
SH3KBP1-203ENST00000379716 CDC42BPBQ9Y5S2 1711 aa11.85□□□□□ -0.51
SH3KBP1-203ENST00000379716 CFAP65Q6ZU64 1925 aaKnown RBP11.84□□□□□ -0.51
SH3KBP1-203ENST00000379716 RTEL1-TNFRSF6BF6WH68 1400 aa11.84□□□□□ -0.51
SH3KBP1-203ENST00000379716 NECTIN2Q92692 538 aa11.84□□□□□ -0.51
SH3KBP1-203ENST00000379716 CARD11Q9BXL7 1154 aa11.84□□□□□ -0.51
SH3KBP1-203ENST00000379716 POGKQ9P215 609 aa11.84□□□□□ -0.51
SH3KBP1-203ENST00000379716 ZBTB7CA1YPR0 619 aa11.83□□□□□ -0.52
SH3KBP1-203ENST00000379716 MAFGO15525 162 aa11.83□□□□□ -0.52
SH3KBP1-203ENST00000379716 FRAT2O75474 233 aaPredicted RBP11.83□□□□□ -0.52
SH3KBP1-203ENST00000379716 SSR1P43307 286 aaKnown RBP11.83□□□□□ -0.52
SH3KBP1-203ENST00000379716 RBM25P49756 843 aaKnown RBP11.83□□□□□ -0.52
SH3KBP1-203ENST00000379716 CBX1P83916 185 aa11.83□□□□□ -0.52
SH3KBP1-203ENST00000379716 NBPF1Q3BBV0 1214 aa11.83□□□□□ -0.52
SH3KBP1-203ENST00000379716 TMTC2Q8N394 836 aa11.83□□□□□ -0.52
SH3KBP1-203ENST00000379716 CFAP74Q9C0B2 1584 aa11.82□□□□□ -0.52
SH3KBP1-203ENST00000379716 TTC36A6NLP5 189 aa11.82□□□□□ -0.52
SH3KBP1-203ENST00000379716 MAP2K1Q02750 393 aaPredicted RBP11.82□□□□□ -0.52
SH3KBP1-203ENST00000379716 FAM177A1Q8N128 213 aaPredicted RBP11.82□□□□□ -0.52
SH3KBP1-203ENST00000379716 CEP120Q8N960 986 aa11.82□□□□□ -0.52
SH3KBP1-203ENST00000379716 RNF217Q8TC41 542 aa11.82□□□□□ -0.52
SH3KBP1-203ENST00000379716 ZMYM3Q14202 1370 aa11.82□□□□□ -0.52
SH3KBP1-203ENST00000379716 THEMISQ8N1K5 641 aaPredicted RBP11.82□□□□□ -0.52
SH3KBP1-203ENST00000379716 SLC26A8Q96RN1 970 aa11.82□□□□□ -0.52
SH3KBP1-203ENST00000379716 DUOX2Q9NRD8 1548 aa11.82□□□□□ -0.52
SH3KBP1-203ENST00000379716 DNMT1P26358 1616 aaKnown RBP11.81□□□□□ -0.52
SH3KBP1-203ENST00000379716 POLD1P28340 1107 aa11.81□□□□□ -0.52
SH3KBP1-203ENST00000379716 GOLGA6L3A6NEY3 463 aa11.81□□□□□ -0.52
SH3KBP1-203ENST00000379716 NBPF11Q86T75 865 aa11.8□□□□□ -0.52
SH3KBP1-203ENST00000379716 GLI2P10070 1586 aa11.8□□□□□ -0.52
SH3KBP1-203ENST00000379716 NUTM2FA1L443 756 aa11.8□□□□□ -0.52
SH3KBP1-203ENST00000379716 MLH3Q9UHC1 1453 aa11.8□□□□□ -0.52
SH3KBP1-203ENST00000379716 CASC1Q6TDU7 716 aa11.79□□□□□ -0.52
SH3KBP1-203ENST00000379716 TRAK1Q9UPV9 953 aa11.79□□□□□ -0.52
SH3KBP1-203ENST00000379716 SLC4A3P48751 1232 aa11.78□□□□□ -0.52
SH3KBP1-203ENST00000379716 TMEM132EQ6IEE7 984 aa11.78□□□□□ -0.52
SH3KBP1-203ENST00000379716 ERBINQ96RT1 1412 aa11.78□□□□□ -0.52
SH3KBP1-203ENST00000379716 CCDC94Q9BW85 323 aaPredicted RBP11.78□□□□□ -0.52
SH3KBP1-203ENST00000379716 YY1AP1Q9H869 796 aa11.78□□□□□ -0.52
SH3KBP1-203ENST00000379716 R3HCC1Q9Y3T6 440 aaKnown RBP11.78□□□□□ -0.52
SH3KBP1-203ENST00000379716 SHANK2Q9UPX8 1470 aa11.78□□□□□ -0.52
SH3KBP1-203ENST00000379716 ARAP3Q8WWN8 1544 aa11.77□□□□□ -0.52
SH3KBP1-203ENST00000379716 MYH16Q9H6N6 1097 aa11.77□□□□□ -0.52
SH3KBP1-203ENST00000379716 TERF2IPQ9NYB0 399 aa11.77□□□□□ -0.52
SH3KBP1-203ENST00000379716 ANKLE2Q86XL3 938 aa11.77□□□□□ -0.53
SH3KBP1-203ENST00000379716 HECW2Q9P2P5 1572 aa11.77□□□□□ -0.53
SH3KBP1-203ENST00000379716 SATB1Q01826 763 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 124.1 ms