RNA–Protein interactions for RNA: ENST00000378680.6

DMD-208, Transcript of dystrophin, humanhuman

TSL 1 (best) BASIC

Gene DMD, Length 1,858 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-208ENST00000378680 MED14O60244 1454 aa25.7■■□□□ 1.71
DMD-208ENST00000378680 CCDC184Q52MB2 194 aa25.7■■□□□ 1.71
DMD-208ENST00000378680 TMC1Q8TDI8 760 aa25.7■■□□□ 1.71
DMD-208ENST00000378680 FAM135BQ49AJ0 1406 aa25.69■■□□□ 1.7
DMD-208ENST00000378680 DIP2AQ14689 1571 aa25.69■■□□□ 1.7
DMD-208ENST00000378680 CC2D1BQ5T0F9 858 aaKnown RBP25.69■■□□□ 1.7
DMD-208ENST00000378680 CPS1P31327 1500 aa25.69■■□□□ 1.7
DMD-208ENST00000378680 SRPK2P78362 688 aaKnown RBP25.68■■□□□ 1.7
DMD-208ENST00000378680 WAPLQ7Z5K2 1190 aa25.68■■□□□ 1.7
DMD-208ENST00000378680 TBX22Q9Y458 520 aa25.68■■□□□ 1.7
DMD-208ENST00000378680 CABP2Q9NPB3 220 aa25.68■■□□□ 1.7
DMD-208ENST00000378680 SLC26A8Q96RN1 970 aa25.67■■□□□ 1.7
DMD-208ENST00000378680 ATAD2Q6PL18 1390 aa25.66■■□□□ 1.7
DMD-208ENST00000378680 PLEKHH1Q9ULM0 1364 aa25.66■■□□□ 1.7
DMD-208ENST00000378680 ANKLE2Q86XL3 938 aa25.66■■□□□ 1.7
DMD-208ENST00000378680 NPC1L1Q9UHC9 1359 aa25.65■■□□□ 1.7
DMD-208ENST00000378680 NINLQ9Y2I6 1382 aa25.65■■□□□ 1.7
DMD-208ENST00000378680 SLC12A5Q9H2X9 1139 aa25.65■■□□□ 1.7
DMD-208ENST00000378680 AMER1Q5JTC6 1135 aaPredicted RBP25.64■■□□□ 1.7
DMD-208ENST00000378680 BRD4O60885 1362 aaPredicted RBP25.64■■□□□ 1.69
DMD-208ENST00000378680 CDK19Q9BWU1 502 aa25.63■■□□□ 1.69
DMD-208ENST00000378680 NLRP13Q86W25 1043 aa25.62■■□□□ 1.69
DMD-208ENST00000378680 FAM9BQ8IZU0 186 aa25.6■■□□□ 1.69
DMD-208ENST00000378680 CARD14Q9BXL6 1004 aa25.6■■□□□ 1.69
DMD-208ENST00000378680 ANKRD36BQ8N2N9 1353 aa25.59■■□□□ 1.69
DMD-208ENST00000378680 ROBO2Q9HCK4 1378 aa25.58■■□□□ 1.69
DMD-208ENST00000378680 PTPRUQ92729 1446 aa25.58■■□□□ 1.69
DMD-208ENST00000378680 NSD3Q9BZ95 1437 aa25.57■■□□□ 1.68
DMD-208ENST00000378680 AMOTL2Q9Y2J4 779 aa25.57■■□□□ 1.68
DMD-208ENST00000378680 PIK3R4Q99570 1358 aa25.56■■□□□ 1.68
DMD-208ENST00000378680 WASLO00401 505 aaPredicted RBP25.55■■□□□ 1.68
DMD-208ENST00000378680 USP32Q8NFA0 1604 aa25.54■■□□□ 1.68
DMD-208ENST00000378680 TERF2IPQ9NYB0 399 aa25.53■■□□□ 1.68
DMD-208ENST00000378680 PTCH1Q13635 1447 aa25.52■■□□□ 1.68
DMD-208ENST00000378680 HNRNPUQ00839 825 aaKnown RBP eCLIP25.51■■□□□ 1.67
DMD-208ENST00000378680 PNISRQ8TF01 805 aaKnown RBP25.51■■□□□ 1.67
DMD-208ENST00000378680 CGNL1Q0VF96 1302 aa25.51■■□□□ 1.67
DMD-208ENST00000378680 HDGFL2Q7Z4V5 671 aaPredicted RBP25.5■■□□□ 1.67
DMD-208ENST00000378680 ADGRB2O60241 1585 aa25.5■■□□□ 1.67
DMD-208ENST00000378680 XRN1Q8IZH2 1706 aaKnown RBP25.5■■□□□ 1.67
DMD-208ENST00000378680 A0A1W2PP64 1363 aa25.49■■□□□ 1.67
DMD-208ENST00000378680 PPP2R1AP30153 589 aa25.49■■□□□ 1.67
DMD-208ENST00000378680 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.48■■□□□ 1.67
DMD-208ENST00000378680 CABP1Q9NZU7 370 aa25.48■■□□□ 1.67
DMD-208ENST00000378680 NPHP4O75161 1426 aaPredicted RBP25.47■■□□□ 1.67
DMD-208ENST00000378680 NSD2O96028 1365 aa25.46■■□□□ 1.67
DMD-208ENST00000378680 ATP7BP35670 1465 aa25.45■■□□□ 1.66
DMD-208ENST00000378680 CD163L1Q9NR16 1453 aa25.45■■□□□ 1.66
DMD-208ENST00000378680 CHD2O14647 1828 aaKnown RBP25.44■■□□□ 1.66
DMD-208ENST00000378680 NUDT16Q96DE0 195 aaKnown RBP25.44■■□□□ 1.66
DMD-208ENST00000378680 MORC1Q86VD1 984 aa25.43■■□□□ 1.66
DMD-208ENST00000378680 PPIP5K1Q6PFW1 1433 aa25.42■■□□□ 1.66
DMD-208ENST00000378680 KCNA6P17658 529 aa25.42■■□□□ 1.66
DMD-208ENST00000378680 CCDC61Q9Y6R9 512 aa25.42■■□□□ 1.66
DMD-208ENST00000378680 NCKAP5LQ9HCH0 1330 aa25.4■■□□□ 1.66
DMD-208ENST00000378680 KDM4FA0A1W2PPD8 638 aa25.38■■□□□ 1.65
DMD-208ENST00000378680 CDC42BPGQ6DT37 1551 aa25.35■■□□□ 1.65
DMD-208ENST00000378680 PRR36Q9H6K5 1346 aa25.35■■□□□ 1.65
DMD-208ENST00000378680 CPSF1Q10570 1443 aaKnown RBP25.35■■□□□ 1.65
DMD-208ENST00000378680 ZBED9Q6R2W3 1325 aa25.34■■□□□ 1.65
DMD-208ENST00000378680 ITSN1Q15811 1721 aa25.33■■□□□ 1.65
DMD-208ENST00000378680 ANKRD26Q9UPS8 1709 aa25.33■■□□□ 1.65
DMD-208ENST00000378680 KIF20BQ96Q89 1820 aa25.33■■□□□ 1.64
DMD-208ENST00000378680 TOPAZ1Q8N9V7 1692 aa25.32■■□□□ 1.64
DMD-208ENST00000378680 INSRP06213 1382 aa25.32■■□□□ 1.64
DMD-208ENST00000378680 ZNF692Q9BU19 519 aaPredicted RBP25.32■■□□□ 1.64
DMD-208ENST00000378680 EDC4Q6P2E9 1401 aaKnown RBP25.31■■□□□ 1.64
DMD-208ENST00000378680 FYB1O15117 783 aa25.31■■□□□ 1.64
DMD-208ENST00000378680 AKAP12Q02952 1782 aa25.31■■□□□ 1.64
DMD-208ENST00000378680 TNNT2P45379 298 aaPredicted RBP25.3■■□□□ 1.64
DMD-208ENST00000378680 WDR43Q15061 677 aaKnown RBP eCLIP25.3■■□□□ 1.64
DMD-208ENST00000378680 GGNBP2Q9H3C7 697 aa25.3■■□□□ 1.64
DMD-208ENST00000378680 MON2Q7Z3U7 1717 aa25.29■■□□□ 1.64
DMD-208ENST00000378680 NUTM2FA1L443 756 aa25.29■■□□□ 1.64
DMD-208ENST00000378680 PLEKHG3A1L390 1219 aa25.28■■□□□ 1.64
DMD-208ENST00000378680 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.28■■□□□ 1.64
DMD-208ENST00000378680 POLR3AO14802 1390 aaPredicted RBP25.27■■□□□ 1.64
DMD-208ENST00000378680 NWD1Q149M9 1564 aa25.27■■□□□ 1.64
DMD-208ENST00000378680 ANKARQ7Z5J8 1434 aa25.26■■□□□ 1.63
DMD-208ENST00000378680 FMN2Q9NZ56 1722 aa25.25■■□□□ 1.63
DMD-208ENST00000378680 GTF3C3Q9Y5Q9 886 aa25.24■■□□□ 1.63
DMD-208ENST00000378680 NALCNQ8IZF0 1738 aa25.24■■□□□ 1.63
DMD-208ENST00000378680 ACEP12821 1306 aa25.24■■□□□ 1.63
DMD-208ENST00000378680 CFAP53Q96M91 514 aa25.23■■□□□ 1.63
DMD-208ENST00000378680 HSPA2P54652 639 aa25.23■■□□□ 1.63
DMD-208ENST00000378680 ADAMTS8Q9UP79 889 aa25.23■■□□□ 1.63
DMD-208ENST00000378680 BLMP54132 1417 aaPredicted RBP25.23■■□□□ 1.63
DMD-208ENST00000378680 MTHFSP49914 203 aa25.22■■□□□ 1.63
DMD-208ENST00000378680 RGPD8O14715 1765 aaPredicted RBP25.21■■□□□ 1.63
DMD-208ENST00000378680 NKTRP30414 1462 aaKnown RBP25.21■■□□□ 1.63
DMD-208ENST00000378680 ADGRL3Q9HAR2 1447 aa25.21■■□□□ 1.63
DMD-208ENST00000378680 LMTK3Q96Q04 1460 aa25.2■■□□□ 1.62
DMD-208ENST00000378680 SCAF1Q9H7N4 1312 aaKnown RBP25.19■■□□□ 1.62
DMD-208ENST00000378680 C14orf37Q86TY3 774 aa25.18■■□□□ 1.62
DMD-208ENST00000378680 PROSER2Q86WR7 435 aaPredicted RBP25.17■■□□□ 1.62
DMD-208ENST00000378680 USP6P35125 1406 aa25.17■■□□□ 1.62
DMD-208ENST00000378680 NME9Q86XW9 330 aa25.17■■□□□ 1.62
DMD-208ENST00000378680 NGDNQ8NEJ9 315 aaKnown RBP25.17■■□□□ 1.62
DMD-208ENST00000378680 PMFBP1Q8TBY8 1022 aa25.17■■□□□ 1.62
DMD-208ENST00000378680 RBM33Q96EV2 1170 aaKnown RBP25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms