RNA–Protein interactions for RNA: ENST00000378578.8

DYNLT3-201, Transcript of dynein light chain Tctex-type 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DYNLT3, Length 2,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYNLT3-201ENST00000378578 PTPRUQ92729 1446 aa27.37■■□□□ 1.97
DYNLT3-201ENST00000378578 CPS1P31327 1500 aa27.35■■□□□ 1.97
DYNLT3-201ENST00000378578 MRS2Q9HD23 443 aa27.35■■□□□ 1.97
DYNLT3-201ENST00000378578 ROBO2Q9HCK4 1378 aa27.34■■□□□ 1.97
DYNLT3-201ENST00000378578 KTN1Q86UP2 1357 aaKnown RBP27.33■■□□□ 1.97
DYNLT3-201ENST00000378578 KNSTRNQ9Y448 316 aa27.33■■□□□ 1.97
DYNLT3-201ENST00000378578 ANKLE2Q86XL3 938 aa27.32■■□□□ 1.96
DYNLT3-201ENST00000378578 CDK19Q9BWU1 502 aa27.31■■□□□ 1.96
DYNLT3-201ENST00000378578 CARD14Q9BXL6 1004 aa27.31■■□□□ 1.96
DYNLT3-201ENST00000378578 TECPR2O15040 1411 aa27.3■■□□□ 1.96
DYNLT3-201ENST00000378578 KDM4FA0A1W2PPD8 638 aa27.29■■□□□ 1.96
DYNLT3-201ENST00000378578 AMOTL2Q9Y2J4 779 aa27.29■■□□□ 1.96
DYNLT3-201ENST00000378578 TBX22Q9Y458 520 aa27.28■■□□□ 1.96
DYNLT3-201ENST00000378578 DIP2AQ14689 1571 aa27.28■■□□□ 1.96
DYNLT3-201ENST00000378578 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.28■■□□□ 1.96
DYNLT3-201ENST00000378578 PARD3Q8TEW0 1356 aa27.27■■□□□ 1.96
DYNLT3-201ENST00000378578 FAM9BQ8IZU0 186 aa27.26■■□□□ 1.96
DYNLT3-201ENST00000378578 AMER1Q5JTC6 1135 aaPredicted RBP27.26■■□□□ 1.95
DYNLT3-201ENST00000378578 FAM135BQ49AJ0 1406 aa27.26■■□□□ 1.95
DYNLT3-201ENST00000378578 CENPBP07199 599 aaPredicted RBP27.25■■□□□ 1.95
DYNLT3-201ENST00000378578 NCKAP5LQ9HCH0 1330 aa27.25■■□□□ 1.95
DYNLT3-201ENST00000378578 RALBP1Q15311 655 aa27.25■■□□□ 1.95
DYNLT3-201ENST00000378578 NSD3Q9BZ95 1437 aa27.25■■□□□ 1.95
DYNLT3-201ENST00000378578 MYBBP1AQ9BQG0 1328 aaKnown RBP27.24■■□□□ 1.95
DYNLT3-201ENST00000378578 XRN1Q8IZH2 1706 aaKnown RBP27.22■■□□□ 1.95
DYNLT3-201ENST00000378578 WASLO00401 505 aaPredicted RBP27.2■■□□□ 1.94
DYNLT3-201ENST00000378578 ATAD2Q6PL18 1390 aa27.19■■□□□ 1.94
DYNLT3-201ENST00000378578 NUTM2FA1L443 756 aa27.19■■□□□ 1.94
DYNLT3-201ENST00000378578 KCNA6P17658 529 aa27.19■■□□□ 1.94
DYNLT3-201ENST00000378578 CHD2O14647 1828 aaKnown RBP27.19■■□□□ 1.94
DYNLT3-201ENST00000378578 PUS7Q96PZ0 661 aaKnown RBP27.18■■□□□ 1.94
DYNLT3-201ENST00000378578 A0A1W2PP64 1363 aa27.18■■□□□ 1.94
DYNLT3-201ENST00000378578 NPHP4O75161 1426 aaPredicted RBP27.18■■□□□ 1.94
DYNLT3-201ENST00000378578 HSPA2P54652 639 aa27.18■■□□□ 1.94
DYNLT3-201ENST00000378578 SIRT1Q96EB6 747 aa27.17■■□□□ 1.94
DYNLT3-201ENST00000378578 CABP1Q9NZU7 370 aa27.17■■□□□ 1.94
DYNLT3-201ENST00000378578 ANKRD36BQ8N2N9 1353 aa27.17■■□□□ 1.94
DYNLT3-201ENST00000378578 RBM33Q96EV2 1170 aaKnown RBP27.17■■□□□ 1.94
DYNLT3-201ENST00000378578 CD163L1Q9NR16 1453 aa27.15■■□□□ 1.94
DYNLT3-201ENST00000378578 PTCH1Q13635 1447 aa27.13■■□□□ 1.93
DYNLT3-201ENST00000378578 SENP3-EIF4A1A0A087X0R7 540 aa27.12■■□□□ 1.93
DYNLT3-201ENST00000378578 NLRP13Q86W25 1043 aa27.12■■□□□ 1.93
DYNLT3-201ENST00000378578 ADGRB2O60241 1585 aa27.11■■□□□ 1.93
DYNLT3-201ENST00000378578 BRD4O60885 1362 aaPredicted RBP27.11■■□□□ 1.93
DYNLT3-201ENST00000378578 PRR36Q9H6K5 1346 aa27.11■■□□□ 1.93
DYNLT3-201ENST00000378578 RGPD8O14715 1765 aaPredicted RBP27.1■■□□□ 1.93
DYNLT3-201ENST00000378578 HNRNPUQ00839 825 aaKnown RBP eCLIP27.1■■□□□ 1.93
DYNLT3-201ENST00000378578 NUDT16Q96DE0 195 aaKnown RBP27.1■■□□□ 1.93
DYNLT3-201ENST00000378578 PPIP5K1Q6PFW1 1433 aa27.1■■□□□ 1.93
DYNLT3-201ENST00000378578 TNNT2P45379 298 aaPredicted RBP27.1■■□□□ 1.93
DYNLT3-201ENST00000378578 PPP2R1AP30153 589 aa27.09■■□□□ 1.93
DYNLT3-201ENST00000378578 NINLQ9Y2I6 1382 aa27.09■■□□□ 1.93
DYNLT3-201ENST00000378578 USP32Q8NFA0 1604 aa27.08■■□□□ 1.93
DYNLT3-201ENST00000378578 ATP7BP35670 1465 aa27.08■■□□□ 1.93
DYNLT3-201ENST00000378578 NPC1L1Q9UHC9 1359 aa27.08■■□□□ 1.93
DYNLT3-201ENST00000378578 PIK3R4Q99570 1358 aa27.07■■□□□ 1.92
DYNLT3-201ENST00000378578 TERF2IPQ9NYB0 399 aa27.07■■□□□ 1.92
DYNLT3-201ENST00000378578 PNISRQ8TF01 805 aaKnown RBP27.06■■□□□ 1.92
DYNLT3-201ENST00000378578 CGNL1Q0VF96 1302 aa27.05■■□□□ 1.92
DYNLT3-201ENST00000378578 NALCNQ8IZF0 1738 aa27.05■■□□□ 1.92
DYNLT3-201ENST00000378578 HDGFL2Q7Z4V5 671 aaPredicted RBP27.05■■□□□ 1.92
DYNLT3-201ENST00000378578 ITSN1Q15811 1721 aa27.04■■□□□ 1.92
DYNLT3-201ENST00000378578 MORC1Q86VD1 984 aa27.02■■□□□ 1.92
DYNLT3-201ENST00000378578 KIF20BQ96Q89 1820 aa27.02■■□□□ 1.92
DYNLT3-201ENST00000378578 LMTK3Q96Q04 1460 aa27.02■■□□□ 1.92
DYNLT3-201ENST00000378578 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.02■■□□□ 1.92
DYNLT3-201ENST00000378578 GGNBP2Q9H3C7 697 aa27.02■■□□□ 1.92
DYNLT3-201ENST00000378578 TOPAZ1Q8N9V7 1692 aa27.02■■□□□ 1.92
DYNLT3-201ENST00000378578 CCDC61Q9Y6R9 512 aa27.01■■□□□ 1.91
DYNLT3-201ENST00000378578 CDC42BPGQ6DT37 1551 aa27■■□□□ 1.91
DYNLT3-201ENST00000378578 AKAP12Q02952 1782 aa27■■□□□ 1.91
DYNLT3-201ENST00000378578 NKTRP30414 1462 aaKnown RBP26.98■■□□□ 1.91
DYNLT3-201ENST00000378578 MON2Q7Z3U7 1717 aa26.97■■□□□ 1.91
DYNLT3-201ENST00000378578 ANKRD26Q9UPS8 1709 aa26.97■■□□□ 1.91
DYNLT3-201ENST00000378578 CPSF1Q10570 1443 aaKnown RBP26.95■■□□□ 1.91
DYNLT3-201ENST00000378578 STRCP1A6NGW2 1772 aa26.95■■□□□ 1.91
DYNLT3-201ENST00000378578 STRCQ7RTU9 1775 aa26.95■■□□□ 1.91
DYNLT3-201ENST00000378578 FMN2Q9NZ56 1722 aa26.95■■□□□ 1.9
DYNLT3-201ENST00000378578 FYB1O15117 783 aa26.95■■□□□ 1.9
DYNLT3-201ENST00000378578 PMFBP1Q8TBY8 1022 aa26.95■■□□□ 1.9
DYNLT3-201ENST00000378578 NWD1Q149M9 1564 aa26.93■■□□□ 1.9
DYNLT3-201ENST00000378578 C14orf37Q86TY3 774 aa26.93■■□□□ 1.9
DYNLT3-201ENST00000378578 ACEP12821 1306 aa26.91■■□□□ 1.9
DYNLT3-201ENST00000378578 ZRANB1Q9UGI0 708 aa26.91■■□□□ 1.9
DYNLT3-201ENST00000378578 NSD2O96028 1365 aa26.9■■□□□ 1.9
DYNLT3-201ENST00000378578 NME9Q86XW9 330 aa26.89■■□□□ 1.9
DYNLT3-201ENST00000378578 EDC4Q6P2E9 1401 aaKnown RBP26.88■■□□□ 1.89
DYNLT3-201ENST00000378578 FBLN1P23142 703 aa26.88■■□□□ 1.89
DYNLT3-201ENST00000378578 PROSER2Q86WR7 435 aaPredicted RBP26.87■■□□□ 1.89
DYNLT3-201ENST00000378578 ADGRL3Q9HAR2 1447 aa26.86■■□□□ 1.89
DYNLT3-201ENST00000378578 NRKQ7Z2Y5 1582 aa26.86■■□□□ 1.89
DYNLT3-201ENST00000378578 MTHFSP49914 203 aa26.85■■□□□ 1.89
DYNLT3-201ENST00000378578 ADAMTS8Q9UP79 889 aa26.85■■□□□ 1.89
DYNLT3-201ENST00000378578 SALL2Q9Y467 1007 aaPredicted RBP26.85■■□□□ 1.89
DYNLT3-201ENST00000378578 PLEKHG3A1L390 1219 aa26.84■■□□□ 1.89
DYNLT3-201ENST00000378578 WDR43Q15061 677 aaKnown RBP eCLIP26.83■■□□□ 1.89
DYNLT3-201ENST00000378578 NGDNQ8NEJ9 315 aaKnown RBP26.82■■□□□ 1.88
DYNLT3-201ENST00000378578 SHPRHQ149N8 1683 aa26.82■■□□□ 1.88
DYNLT3-201ENST00000378578 MAP2P11137 1827 aaKnown RBP26.81■■□□□ 1.88
DYNLT3-201ENST00000378578 USP6P35125 1406 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms