RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 DIAPH1O60610 1272 aaKnown RBP14.55□□□□□ -0.08
PCDHA9-201ENST00000378122 INTS3Q68E01 1043 aaKnown RBP14.55□□□□□ -0.08
PCDHA9-201ENST00000378122 ZNF219Q9P2Y4 722 aaPredicted RBP14.55□□□□□ -0.08
PCDHA9-201ENST00000378122 RUFY2Q8WXA3 655 aa14.55□□□□□ -0.08
PCDHA9-201ENST00000378122 WWC3Q9ULE0 1092 aa14.55□□□□□ -0.08
PCDHA9-201ENST00000378122 PTPRGP23470 1445 aa14.54□□□□□ -0.08
PCDHA9-201ENST00000378122 TXNDC2Q86VQ3 553 aa14.54□□□□□ -0.08
PCDHA9-201ENST00000378122 KIF21BO75037 1637 aa14.54□□□□□ -0.08
PCDHA9-201ENST00000378122 PPM1FP49593 454 aaPredicted RBP14.54□□□□□ -0.08
PCDHA9-201ENST00000378122 AIMP1Q12904 312 aaKnown RBP14.54□□□□□ -0.08
PCDHA9-201ENST00000378122 PAF1Q8N7H5 531 aa14.54□□□□□ -0.08
PCDHA9-201ENST00000378122 TPM2P07951 284 aa14.54□□□□□ -0.08
PCDHA9-201ENST00000378122 TPM1P09493 284 aa14.54□□□□□ -0.08
PCDHA9-201ENST00000378122 MRE11P49959 708 aa14.54□□□□□ -0.08
PCDHA9-201ENST00000378122 CUX1P39880 1505 aa14.54□□□□□ -0.08
PCDHA9-201ENST00000378122 VPS37CA5D8V6 355 aaPredicted RBP14.53□□□□□ -0.08
PCDHA9-201ENST00000378122 ECM2O94769 699 aaPredicted RBP14.53□□□□□ -0.08
PCDHA9-201ENST00000378122 NASPP49321 788 aaPredicted RBP14.53□□□□□ -0.08
PCDHA9-201ENST00000378122 IFIT2P09913 472 aaKnown RBP14.53□□□□□ -0.08
PCDHA9-201ENST00000378122 AKAP17AQ02040 695 aaKnown RBP14.53□□□□□ -0.08
PCDHA9-201ENST00000378122 CCDC39Q9UFE4 941 aa14.53□□□□□ -0.08
PCDHA9-201ENST00000378122 TTLL12Q14166 644 aaPredicted RBP14.53□□□□□ -0.08
PCDHA9-201ENST00000378122 HOMER1Q86YM7 354 aa14.53□□□□□ -0.08
PCDHA9-201ENST00000378122 ROCK1Q13464 1354 aa14.53□□□□□ -0.08
PCDHA9-201ENST00000378122 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.53□□□□□ -0.08
PCDHA9-201ENST00000378122 TOM1L2Q6ZVM7 507 aa14.52□□□□□ -0.08
PCDHA9-201ENST00000378122 C16orf71Q8IYS4 520 aaPredicted RBP14.52□□□□□ -0.08
PCDHA9-201ENST00000378122 BICDL1Q6ZP65 573 aa14.52□□□□□ -0.08
PCDHA9-201ENST00000378122 C9orf78Q9NZ63 289 aaPredicted RBP14.52□□□□□ -0.08
PCDHA9-201ENST00000378122 SMC3Q9UQE7 1217 aa14.52□□□□□ -0.08
PCDHA9-201ENST00000378122 ZKSCAN1P17029 563 aaPredicted RBP14.52□□□□□ -0.09
PCDHA9-201ENST00000378122 NUCB2P80303 420 aa14.52□□□□□ -0.09
PCDHA9-201ENST00000378122 PCMTD1Q96MG8 357 aaPredicted RBP14.52□□□□□ -0.09
PCDHA9-201ENST00000378122 WASHC2AQ641Q2 1341 aa14.52□□□□□ -0.09
PCDHA9-201ENST00000378122 CCDC43Q96MW1 224 aaKnown RBP14.52□□□□□ -0.09
PCDHA9-201ENST00000378122 IFT57Q9NWB7 429 aa14.52□□□□□ -0.09
PCDHA9-201ENST00000378122 TMEM132AQ24JP5 1023 aa14.51□□□□□ -0.09
PCDHA9-201ENST00000378122 SASS6Q6UVJ0 657 aa14.51□□□□□ -0.09
PCDHA9-201ENST00000378122 CCDC70Q6NSX1 233 aa14.51□□□□□ -0.09
PCDHA9-201ENST00000378122 API5Q9BZZ5 524 aaKnown RBP14.51□□□□□ -0.09
PCDHA9-201ENST00000378122 TRIM29Q14134 588 aa14.51□□□□□ -0.09
PCDHA9-201ENST00000378122 SYNE3Q6ZMZ3 975 aa14.51□□□□□ -0.09
PCDHA9-201ENST00000378122 FGD6Q6ZV73 1430 aa14.5□□□□□ -0.09
PCDHA9-201ENST00000378122 CDCA7LQ96GN5 454 aa14.5□□□□□ -0.09
PCDHA9-201ENST00000378122 NGLY1Q96IV0 654 aa14.5□□□□□ -0.09
PCDHA9-201ENST00000378122 TRAK2O60296 914 aa14.5□□□□□ -0.09
PCDHA9-201ENST00000378122 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.5□□□□□ -0.09
PCDHA9-201ENST00000378122 AKNAQ7Z591 1439 aa14.49□□□□□ -0.09
PCDHA9-201ENST00000378122 HMOX1P09601 288 aa14.49□□□□□ -0.09
PCDHA9-201ENST00000378122 CADPSQ9ULU8 1353 aa14.49□□□□□ -0.09
PCDHA9-201ENST00000378122 RBM10P98175 930 aaKnown RBP14.48□□□□□ -0.09
PCDHA9-201ENST00000378122 ABTB2Q8N961 1025 aa14.48□□□□□ -0.09
PCDHA9-201ENST00000378122 CDC45O75419 566 aa14.48□□□□□ -0.09
PCDHA9-201ENST00000378122 UBAP1LF5GYI3 381 aa14.48□□□□□ -0.09
PCDHA9-201ENST00000378122 NEXNQ0ZGT2 675 aa14.48□□□□□ -0.09
PCDHA9-201ENST00000378122 ADAMTS8Q9UP79 889 aa14.48□□□□□ -0.09
PCDHA9-201ENST00000378122 FKBP5Q13451 457 aaPredicted RBP14.47□□□□□ -0.09
PCDHA9-201ENST00000378122 LRRC9Q6ZRR7 1453 aa14.47□□□□□ -0.09
PCDHA9-201ENST00000378122 RNF214Q8ND24 703 aa14.47□□□□□ -0.09
PCDHA9-201ENST00000378122 PKNOX2Q96KN3 472 aa14.47□□□□□ -0.09
PCDHA9-201ENST00000378122 BRD4O60885 1362 aaPredicted RBP14.47□□□□□ -0.09
PCDHA9-201ENST00000378122 VGFO15240 615 aaPredicted RBP14.47□□□□□ -0.09
PCDHA9-201ENST00000378122 SPDYE4A6NLX3 237 aa14.47□□□□□ -0.09
PCDHA9-201ENST00000378122 PLCD3Q8N3E9 789 aa14.47□□□□□ -0.09
PCDHA9-201ENST00000378122 ATP2B2Q01814 1243 aa14.46□□□□□ -0.09
PCDHA9-201ENST00000378122 MYOM3Q5VTT5 1437 aa14.46□□□□□ -0.09
PCDHA9-201ENST00000378122 CPLX1O14810 134 aa14.46□□□□□ -0.09
PCDHA9-201ENST00000378122 RNF20Q5VTR2 975 aa14.46□□□□□ -0.1
PCDHA9-201ENST00000378122 CAVIN1Q6NZI2 390 aaKnown RBP14.46□□□□□ -0.1
PCDHA9-201ENST00000378122 NFXL1Q6ZNB6 911 aa14.45□□□□□ -0.1
PCDHA9-201ENST00000378122 TSPYL4Q9UJ04 414 aa14.45□□□□□ -0.1
PCDHA9-201ENST00000378122 ZNF644Q9H582 1327 aaPredicted RBP14.45□□□□□ -0.1
PCDHA9-201ENST00000378122 G3BP1Q13283 466 aaKnown RBP eCLIP14.44□□□□□ -0.1
PCDHA9-201ENST00000378122 ATAD2BQ9ULI0 1458 aa14.44□□□□□ -0.1
PCDHA9-201ENST00000378122 NLRP6P59044 892 aa14.44□□□□□ -0.1
PCDHA9-201ENST00000378122 MNS1Q8NEH6 495 aa14.44□□□□□ -0.1
PCDHA9-201ENST00000378122 PDZRN3Q9UPQ7 1066 aa14.44□□□□□ -0.1
PCDHA9-201ENST00000378122 ARGLU1Q9NWB6 273 aaPredicted RBP14.44□□□□□ -0.1
PCDHA9-201ENST00000378122 HOOK1Q9UJC3 728 aaKnown RBP14.43□□□□□ -0.1
PCDHA9-201ENST00000378122 FANCD2Q9BXW9 1451 aa14.43□□□□□ -0.1
PCDHA9-201ENST00000378122 GNAI1P63096 354 aa14.43□□□□□ -0.1
PCDHA9-201ENST00000378122 CCDC173Q0VFZ6 552 aa14.43□□□□□ -0.1
PCDHA9-201ENST00000378122 LRRFIP1Q32MZ4 808 aaKnown RBP14.43□□□□□ -0.1
PCDHA9-201ENST00000378122 MIA2Q96PC5 1412 aa14.43□□□□□ -0.1
PCDHA9-201ENST00000378122 CPLX2Q6PUV4 134 aaKnown RBP14.42□□□□□ -0.1
PCDHA9-201ENST00000378122 GPRASP1Q5JY77 1395 aa14.42□□□□□ -0.1
PCDHA9-201ENST00000378122 MTERF4Q7Z6M4 381 aaKnown RBP14.42□□□□□ -0.1
PCDHA9-201ENST00000378122 MAP7D2Q96T17 732 aa14.42□□□□□ -0.1
PCDHA9-201ENST00000378122 TSPY26PQ9H489 355 aa14.42□□□□□ -0.1
PCDHA9-201ENST00000378122 NOM1Q5C9Z4 860 aaKnown RBP14.42□□□□□ -0.1
PCDHA9-201ENST00000378122 ANKRD20A12PQ8NF67 263 aa14.42□□□□□ -0.1
PCDHA9-201ENST00000378122 C1orf115Q9H7X2 142 aa14.42□□□□□ -0.1
PCDHA9-201ENST00000378122 ZFYVE27Q5T4F4 411 aa14.41□□□□□ -0.1
PCDHA9-201ENST00000378122 CCDC73Q6ZRK6 1079 aa14.41□□□□□ -0.1
PCDHA9-201ENST00000378122 PRPF40AO75400 957 aaKnown RBP14.41□□□□□ -0.1
PCDHA9-201ENST00000378122 CABP2Q9NPB3 220 aa14.41□□□□□ -0.1
PCDHA9-201ENST00000378122 GGNBP2Q9H3C7 697 aa14.41□□□□□ -0.1
PCDHA9-201ENST00000378122 ANKLE2Q86XL3 938 aa14.41□□□□□ -0.1
PCDHA9-201ENST00000378122 NINLQ9Y2I6 1382 aa14.41□□□□□ -0.1
PCDHA9-201ENST00000378122 CLEC11AQ9Y240 323 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms