RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 RRAGDQ9NQL2 400 aaPredicted RBP17.88■□□□□ 0.45
SF1-205ENST00000377394 NSD3Q9BZ95 1437 aa17.88■□□□□ 0.45
SF1-205ENST00000377394 ADGRB1O14514 1584 aa17.87■□□□□ 0.45
SF1-205ENST00000377394 ZC3H13Q5T200 1668 aaKnown RBP17.87■□□□□ 0.45
SF1-205ENST00000377394 WWC1Q8IX03 1113 aa17.87■□□□□ 0.45
SF1-205ENST00000377394 PPLO60437 1756 aa17.86■□□□□ 0.45
SF1-205ENST00000377394 SHPRHQ149N8 1683 aa17.86■□□□□ 0.45
SF1-205ENST00000377394 TRAK1Q9UPV9 953 aa17.86■□□□□ 0.45
SF1-205ENST00000377394 FRMPD1Q5SYB0 1578 aa17.86■□□□□ 0.45
SF1-205ENST00000377394 CHGAP10645 457 aaKnown RBP17.86■□□□□ 0.45
SF1-205ENST00000377394 SLC12A5Q9H2X9 1139 aa17.85■□□□□ 0.45
SF1-205ENST00000377394 QRICH2Q9H0J4 1663 aa17.84■□□□□ 0.45
SF1-205ENST00000377394 MORC1Q86VD1 984 aa17.84■□□□□ 0.45
SF1-205ENST00000377394 POGZQ7Z3K3 1410 aa17.83■□□□□ 0.45
SF1-205ENST00000377394 PDE3AQ14432 1141 aa17.83■□□□□ 0.44
SF1-205ENST00000377394 VSIG10Q8N0Z9 540 aa17.83■□□□□ 0.44
SF1-205ENST00000377394 MLH3Q9UHC1 1453 aa17.83■□□□□ 0.44
SF1-205ENST00000377394 TMEM132EQ6IEE7 984 aa17.82■□□□□ 0.44
SF1-205ENST00000377394 POGKQ9P215 609 aa17.82■□□□□ 0.44
SF1-205ENST00000377394 IGHDP01880 384 aa17.81■□□□□ 0.44
SF1-205ENST00000377394 RGS3P49796 1198 aa17.81■□□□□ 0.44
SF1-205ENST00000377394 RPGRIP1LQ68CZ1 1315 aa17.81■□□□□ 0.44
SF1-205ENST00000377394 IQSEC2Q5JU85 1478 aa17.81■□□□□ 0.44
SF1-205ENST00000377394 PHF23Q9BUL5 403 aaPredicted RBP17.81■□□□□ 0.44
SF1-205ENST00000377394 ZMYND15Q9H091 742 aa17.81■□□□□ 0.44
SF1-205ENST00000377394 USP32Q8NFA0 1604 aa17.81■□□□□ 0.44
SF1-205ENST00000377394 CGNL1Q0VF96 1302 aa17.81■□□□□ 0.44
SF1-205ENST00000377394 NINLQ9Y2I6 1382 aa17.81■□□□□ 0.44
SF1-205ENST00000377394 GGT6Q6P531 493 aa17.81■□□□□ 0.44
SF1-205ENST00000377394 TNNT2P45379 298 aaPredicted RBP17.8■□□□□ 0.44
SF1-205ENST00000377394 RUNDC1Q96C34 613 aa17.8■□□□□ 0.44
SF1-205ENST00000377394 HECW2Q9P2P5 1572 aa17.8■□□□□ 0.44
SF1-205ENST00000377394 CFAP65Q6ZU64 1925 aaKnown RBP17.79■□□□□ 0.44
SF1-205ENST00000377394 ABCC3O15438 1527 aa17.79■□□□□ 0.44
SF1-205ENST00000377394 CD109Q6YHK3 1445 aa17.78■□□□□ 0.44
SF1-205ENST00000377394 TCP11L2Q8N4U5 519 aa17.78■□□□□ 0.44
SF1-205ENST00000377394 PANK1Q8TE04 598 aa17.77■□□□□ 0.44
SF1-205ENST00000377394 RRP7AQ9Y3A4 280 aaKnown RBP17.77■□□□□ 0.44
SF1-205ENST00000377394 CFAP74Q9C0B2 1584 aa17.77■□□□□ 0.44
SF1-205ENST00000377394 CLUAP1Q96AJ1 413 aa17.77■□□□□ 0.44
SF1-205ENST00000377394 MTHFSP49914 203 aa17.76■□□□□ 0.43
SF1-205ENST00000377394 NEUROD2Q15784 382 aa17.76■□□□□ 0.43
SF1-205ENST00000377394 ARXQ96QS3 562 aa17.76■□□□□ 0.43
SF1-205ENST00000377394 COG6Q9Y2V7 657 aa17.76■□□□□ 0.43
SF1-205ENST00000377394 RARSP54136 660 aaKnown RBP17.76■□□□□ 0.43
SF1-205ENST00000377394 PUS7Q96PZ0 661 aaKnown RBP17.76■□□□□ 0.43
SF1-205ENST00000377394 GLI2P10070 1586 aa17.75■□□□□ 0.43
SF1-205ENST00000377394 WDR63Q8IWG1 891 aa17.75■□□□□ 0.43
SF1-205ENST00000377394 SIGLEC1Q9BZZ2 1709 aa17.75■□□□□ 0.43
SF1-205ENST00000377394 TULP4Q9NRJ4 1543 aa17.75■□□□□ 0.43
SF1-205ENST00000377394 CCDC27Q2M243 656 aa17.74■□□□□ 0.43
SF1-205ENST00000377394 GLIPR1L2Q4G1C9 344 aa17.74■□□□□ 0.43
SF1-205ENST00000377394 NPM1P06748 294 aaKnown RBP eCLIP17.73■□□□□ 0.43
SF1-205ENST00000377394 CANXP27824 592 aaKnown RBP17.73■□□□□ 0.43
SF1-205ENST00000377394 PIK3C2BO00750 1634 aa17.73■□□□□ 0.43
SF1-205ENST00000377394 CAMSAP1Q5T5Y3 1602 aa17.73■□□□□ 0.43
SF1-205ENST00000377394 ANKRD36BQ8N2N9 1353 aa17.73■□□□□ 0.43
SF1-205ENST00000377394 ARHGEF28Q8N1W1 1705 aaKnown RBP17.72■□□□□ 0.43
SF1-205ENST00000377394 NEXMIFQ5QGS0 1516 aa17.72■□□□□ 0.43
SF1-205ENST00000377394 EVC2Q86UK5 1308 aa17.72■□□□□ 0.43
SF1-205ENST00000377394 CFAP53Q96M91 514 aa17.71■□□□□ 0.43
SF1-205ENST00000377394 NAP1L5Q96NT1 182 aaPredicted RBP17.71■□□□□ 0.43
SF1-205ENST00000377394 NSD2O96028 1365 aa17.71■□□□□ 0.43
SF1-205ENST00000377394 NCBP3Q53F19 620 aaKnown RBP17.71■□□□□ 0.43
SF1-205ENST00000377394 NUTM2DQ5VT03 806 aaPredicted RBP17.71■□□□□ 0.43
SF1-205ENST00000377394 USP19O94966 1318 aa17.71■□□□□ 0.42
SF1-205ENST00000377394 VIRMAQ69YN4 1812 aaKnown RBP17.7■□□□□ 0.42
SF1-205ENST00000377394 VGFO15240 615 aaPredicted RBP17.7■□□□□ 0.42
SF1-205ENST00000377394 RLBP1P12271 317 aa17.69■□□□□ 0.42
SF1-205ENST00000377394 TNNQ9UQP3 1299 aa17.69■□□□□ 0.42
SF1-205ENST00000377394 MAPK8IP3Q9UPT6 1336 aa17.69■□□□□ 0.42
SF1-205ENST00000377394 AAMPQ13685 434 aa17.69■□□□□ 0.42
SF1-205ENST00000377394 CABP2Q9NPB3 220 aa17.68■□□□□ 0.42
SF1-205ENST00000377394 PCDHB15Q9Y5E8 787 aa17.67■□□□□ 0.42
SF1-205ENST00000377394 ADGRB2O60241 1585 aa17.67■□□□□ 0.42
SF1-205ENST00000377394 RAPGEF3O95398 923 aa17.66■□□□□ 0.42
SF1-205ENST00000377394 PMFBP1Q8TBY8 1022 aa17.66■□□□□ 0.42
SF1-205ENST00000377394 SLKQ9H2G2 1235 aaPredicted RBP17.66■□□□□ 0.42
SF1-205ENST00000377394 ARHGAP31Q2M1Z3 1444 aa17.66■□□□□ 0.42
SF1-205ENST00000377394 SEC24BO95487 1268 aa17.65■□□□□ 0.42
SF1-205ENST00000377394 HSP90AA2PQ14568 343 aaPredicted RBP17.65■□□□□ 0.42
SF1-205ENST00000377394 BCL2L13Q9BXK5 485 aa17.65■□□□□ 0.42
SF1-205ENST00000377394 U2AF1L5P0DN76 240 aaPredicted RBP17.65■□□□□ 0.42
SF1-205ENST00000377394 U2AF1Q01081 240 aaKnown RBP eCLIP17.65■□□□□ 0.424e-10■■■■■ 47.9
SF1-205ENST00000377394 MYH16Q9H6N6 1097 aa17.65■□□□□ 0.42
SF1-205ENST00000377394 DIP2CQ9Y2E4 1556 aa17.65■□□□□ 0.42
SF1-205ENST00000377394 IDI1Q13907 227 aa17.65■□□□□ 0.42
SF1-205ENST00000377394 ZFYVE9O95405 1425 aa17.65■□□□□ 0.42
SF1-205ENST00000377394 NEO1Q92859 1461 aa17.65■□□□□ 0.42
SF1-205ENST00000377394 A0A1W2PP64 1363 aa17.64■□□□□ 0.41
SF1-205ENST00000377394 ABCC11Q96J66 1382 aa17.64■□□□□ 0.41
SF1-205ENST00000377394 PNNQ9H307 717 aaKnown RBP17.63■□□□□ 0.41
SF1-205ENST00000377394 SAFB2Q14151 953 aaKnown RBP eCLIP17.62■□□□□ 0.41
SF1-205ENST00000377394 NLRP1Q9C000 1473 aa17.62■□□□□ 0.41
SF1-205ENST00000377394 PLEKHF1Q96S99 279 aa17.62■□□□□ 0.41
SF1-205ENST00000377394 PANK2Q9BZ23 570 aa17.62■□□□□ 0.41
SF1-205ENST00000377394 COL3A1P02461 1466 aaPredicted RBP17.61■□□□□ 0.41
SF1-205ENST00000377394 ZMYM3Q14202 1370 aa17.61■□□□□ 0.41
SF1-205ENST00000377394 HSP90AA1P07900 732 aaKnown RBP17.61■□□□□ 0.41
SF1-205ENST00000377394 XRCC6P12956 609 aaKnown RBP eCLIP17.61■□□□□ 0.411e-7■■■□□ 17.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms