RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 MSNP26038 577 aaKnown RBP22.02■■□□□ 1.12
CLSTN1-202ENST00000377298 CABP1Q9NZU7 370 aa22.01■■□□□ 1.11
CLSTN1-202ENST00000377298 PDE4AP27815 886 aa22.01■■□□□ 1.11
CLSTN1-202ENST00000377298 PLEKHO1Q53GL0 409 aaPredicted RBP22.01■■□□□ 1.11
CLSTN1-202ENST00000377298 PCF11O94913 1555 aaKnown RBP22.01■■□□□ 1.11
CLSTN1-202ENST00000377298 RTEL1-TNFRSF6BF6WH68 1400 aa22■■□□□ 1.11
CLSTN1-202ENST00000377298 REC8O95072 547 aa22■■□□□ 1.11
CLSTN1-202ENST00000377298 PRKAR2BP31323 418 aa21.99■■□□□ 1.11
CLSTN1-202ENST00000377298 ATAD2Q6PL18 1390 aa21.98■■□□□ 1.11
CLSTN1-202ENST00000377298 RIC3Q7Z5B4 369 aa21.98■■□□□ 1.11
CLSTN1-202ENST00000377298 SMG6Q86US8 1419 aaKnown RBP21.98■■□□□ 1.11
CLSTN1-202ENST00000377298 CAMSAP2Q08AD1 1489 aa21.97■■□□□ 1.11
CLSTN1-202ENST00000377298 MAP3K1Q13233 1512 aa21.97■■□□□ 1.11
CLSTN1-202ENST00000377298 SLC26A8Q96RN1 970 aa21.97■■□□□ 1.11
CLSTN1-202ENST00000377298 KIF14Q15058 1648 aa21.96■■□□□ 1.11
CLSTN1-202ENST00000377298 TPM4P67936 248 aa21.96■■□□□ 1.11
CLSTN1-202ENST00000377298 NCBP3Q53F19 620 aaKnown RBP21.96■■□□□ 1.11
CLSTN1-202ENST00000377298 NOL10Q9BSC4 688 aaKnown RBP21.96■■□□□ 1.11
CLSTN1-202ENST00000377298 GZF1Q9H116 711 aaPredicted RBP21.96■■□□□ 1.11
CLSTN1-202ENST00000377298 FANCIQ9NVI1 1328 aa21.96■■□□□ 1.11
CLSTN1-202ENST00000377298 FOXD4L1Q9NU39 408 aa21.96■■□□□ 1.11
CLSTN1-202ENST00000377298 ADGRL1O94910 1474 aa21.95■■□□□ 1.1
CLSTN1-202ENST00000377298 ZKSCAN1P17029 563 aaPredicted RBP21.95■■□□□ 1.1
CLSTN1-202ENST00000377298 CCDC30Q5VVM6 783 aa21.94■■□□□ 1.1
CLSTN1-202ENST00000377298 RASSF8Q8NHQ8 419 aa21.93■■□□□ 1.1
CLSTN1-202ENST00000377298 AMOTL1Q8IY63 956 aa21.93■■□□□ 1.1
CLSTN1-202ENST00000377298 ABCC5O15440 1437 aa21.93■■□□□ 1.1
CLSTN1-202ENST00000377298 SYNE3Q6ZMZ3 975 aa21.92■■□□□ 1.1
CLSTN1-202ENST00000377298 VPS37DQ86XT2 251 aa21.92■■□□□ 1.1
CLSTN1-202ENST00000377298 PHF23Q9BUL5 403 aaPredicted RBP21.92■■□□□ 1.1
CLSTN1-202ENST00000377298 AIMP1Q12904 312 aaKnown RBP21.92■■□□□ 1.1
CLSTN1-202ENST00000377298 ZNF608Q9ULD9 1512 aaPredicted RBP21.92■■□□□ 1.1
CLSTN1-202ENST00000377298 UBTFL1P0CB47 393 aaPredicted RBP21.92■■□□□ 1.1
CLSTN1-202ENST00000377298 TATP17735 454 aaPredicted RBP21.92■■□□□ 1.1
CLSTN1-202ENST00000377298 CPLX2Q6PUV4 134 aaKnown RBP21.92■■□□□ 1.1
CLSTN1-202ENST00000377298 SF3A1Q15459 793 aaKnown RBP21.91■■□□□ 1.1
CLSTN1-202ENST00000377298 FAM184AQ8NB25 1140 aa21.91■■□□□ 1.1
CLSTN1-202ENST00000377298 ATP6V1DQ9Y5K8 247 aa21.91■■□□□ 1.1
CLSTN1-202ENST00000377298 ERC2O15083 957 aa21.91■■□□□ 1.1
CLSTN1-202ENST00000377298 H3BQV1 296 aa21.9■■□□□ 1.1
CLSTN1-202ENST00000377298 AKAP17AQ02040 695 aaKnown RBP21.9■■□□□ 1.1
CLSTN1-202ENST00000377298 IFFO2Q5TF58 517 aa21.9■■□□□ 1.1
CLSTN1-202ENST00000377298 KIAA2012Q0VF49 1180 aa21.89■■□□□ 1.1
CLSTN1-202ENST00000377298 GNAI3P08754 354 aa21.89■■□□□ 1.09
CLSTN1-202ENST00000377298 PTPN23Q9H3S7 1636 aa21.88■■□□□ 1.09
CLSTN1-202ENST00000377298 RNF20Q5VTR2 975 aa21.88■■□□□ 1.09
CLSTN1-202ENST00000377298 PANK1Q8TE04 598 aa21.88■■□□□ 1.09
CLSTN1-202ENST00000377298 SULT6B1Q6IMI4 303 aa21.88■■□□□ 1.09
CLSTN1-202ENST00000377298 PHF14O94880 888 aa21.88■■□□□ 1.09
CLSTN1-202ENST00000377298 AKNAQ7Z591 1439 aa21.88■■□□□ 1.09
CLSTN1-202ENST00000377298 USP35Q9P2H5 1018 aa21.87■■□□□ 1.09
CLSTN1-202ENST00000377298 CCDC61Q9Y6R9 512 aa21.87■■□□□ 1.09
CLSTN1-202ENST00000377298 MARCH6O60337 910 aa21.86■■□□□ 1.09
CLSTN1-202ENST00000377298 BIVM-ERCC5R4GMW8 1640 aa21.86■■□□□ 1.09
CLSTN1-202ENST00000377298 DDX11L8A8MPP1 907 aa21.86■■□□□ 1.09
CLSTN1-202ENST00000377298 PNISRQ8TF01 805 aaKnown RBP21.86■■□□□ 1.09
CLSTN1-202ENST00000377298 EXOSC9Q06265 439 aaKnown RBP21.86■■□□□ 1.09
CLSTN1-202ENST00000377298 TWISTNBQ3B726 338 aaPredicted RBP21.86■■□□□ 1.09
CLSTN1-202ENST00000377298 INTS3Q68E01 1043 aaKnown RBP21.86■■□□□ 1.09
CLSTN1-202ENST00000377298 GOLGA6L3A6NEY3 463 aa21.85■■□□□ 1.09
CLSTN1-202ENST00000377298 APPP05067 770 aa21.85■■□□□ 1.09
CLSTN1-202ENST00000377298 LNPKQ9C0E8 428 aa21.85■■□□□ 1.09
CLSTN1-202ENST00000377298 STRN4Q9NRL3 753 aa21.85■■□□□ 1.09
CLSTN1-202ENST00000377298 TRDNQ13061 729 aa21.84■■□□□ 1.09
CLSTN1-202ENST00000377298 ANO2Q9NQ90 1003 aa21.84■■□□□ 1.09
CLSTN1-202ENST00000377298 KLHL34Q8N239 644 aa21.83■■□□□ 1.09
CLSTN1-202ENST00000377298 CDCA7LQ96GN5 454 aa21.83■■□□□ 1.09
CLSTN1-202ENST00000377298 PPP6R1Q9UPN7 881 aa21.83■■□□□ 1.09
CLSTN1-202ENST00000377298 NUDT16Q96DE0 195 aaKnown RBP21.83■■□□□ 1.08
CLSTN1-202ENST00000377298 VPS53Q5VIR6 699 aa21.82■■□□□ 1.08
CLSTN1-202ENST00000377298 TRIM34Q9BYJ4 488 aa21.82■■□□□ 1.08
CLSTN1-202ENST00000377298 NCOA1Q15788 1441 aa21.82■■□□□ 1.08
CLSTN1-202ENST00000377298 CT47B1P0C2W7 299 aaPredicted RBP21.82■■□□□ 1.08
CLSTN1-202ENST00000377298 WDR63Q8IWG1 891 aa21.82■■□□□ 1.08
CLSTN1-202ENST00000377298 RBM33Q96EV2 1170 aaKnown RBP21.81■■□□□ 1.08
CLSTN1-202ENST00000377298 SPG7Q9UQ90 795 aa21.81■■□□□ 1.08
CLSTN1-202ENST00000377298 DENND4BO75064 1496 aaPredicted RBP21.81■■□□□ 1.08
CLSTN1-202ENST00000377298 FOXD4L5Q5VV16 416 aaPredicted RBP21.81■■□□□ 1.08
CLSTN1-202ENST00000377298 FOXD4L4Q8WXT5 416 aaPredicted RBP21.81■■□□□ 1.08
CLSTN1-202ENST00000377298 TOM1L2Q6ZVM7 507 aa21.81■■□□□ 1.08
CLSTN1-202ENST00000377298 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.81■■□□□ 1.08
CLSTN1-202ENST00000377298 ZNF530Q6P9A1 599 aaPredicted RBP21.81■■□□□ 1.08
CLSTN1-202ENST00000377298 NEUROD6Q96NK8 337 aa21.81■■□□□ 1.08
CLSTN1-202ENST00000377298 PDE3AQ14432 1141 aa21.79■■□□□ 1.08
CLSTN1-202ENST00000377298 FANCAO15360 1455 aa21.79■■□□□ 1.08
CLSTN1-202ENST00000377298 KIF6Q6ZMV9 814 aa21.79■■□□□ 1.08
CLSTN1-202ENST00000377298 PRDM11Q9NQV5 511 aa21.79■■□□□ 1.08
CLSTN1-202ENST00000377298 CLASRPQ8N2M8 674 aaKnown RBP21.78■■□□□ 1.08
CLSTN1-202ENST00000377298 CPLX1O14810 134 aa21.78■■□□□ 1.08
CLSTN1-202ENST00000377298 HDGFL1Q5TGJ6 251 aa21.78■■□□□ 1.08
CLSTN1-202ENST00000377298 RBM42Q9BTD8 480 aaKnown RBP21.78■■□□□ 1.08
CLSTN1-202ENST00000377298 TRIM29Q14134 588 aa21.77■■□□□ 1.08
CLSTN1-202ENST00000377298 FCHSD2O94868 740 aa21.77■■□□□ 1.08
CLSTN1-202ENST00000377298 CABP4P57796 275 aa21.77■■□□□ 1.08
CLSTN1-202ENST00000377298 KCNH5Q8NCM2 988 aa21.76■■□□□ 1.07
CLSTN1-202ENST00000377298 NSD3Q9BZ95 1437 aa21.75■■□□□ 1.07
CLSTN1-202ENST00000377298 SKOR2Q2VWA4 1001 aaPredicted RBP21.75■■□□□ 1.07
CLSTN1-202ENST00000377298 WWC1Q8IX03 1113 aa21.75■■□□□ 1.07
CLSTN1-202ENST00000377298 SURF6O75683 361 aaKnown RBP21.75■■□□□ 1.07
CLSTN1-202ENST00000377298 FBXW7Q969H0 707 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms