RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 TMEM94Q12767 1356 aa14.78□□□□□ -0.04
C9orf85-202ENST00000377027 SLC26A8Q96RN1 970 aa14.78□□□□□ -0.04
C9orf85-202ENST00000377027 EID1Q9Y6B2 187 aa14.78□□□□□ -0.04
C9orf85-202ENST00000377027 NKTRP30414 1462 aaKnown RBP14.77□□□□□ -0.04
C9orf85-202ENST00000377027 ZNF467Q7Z7K2 595 aaPredicted RBP14.76□□□□□ -0.05
C9orf85-202ENST00000377027 RNF25Q96BH1 459 aaPredicted RBP14.76□□□□□ -0.05
C9orf85-202ENST00000377027 RBM33Q96EV2 1170 aaKnown RBP14.76□□□□□ -0.05
C9orf85-202ENST00000377027 SLC52A1Q9NWF4 448 aa14.76□□□□□ -0.05
C9orf85-202ENST00000377027 PCDHB8Q9UN66 801 aa14.76□□□□□ -0.05
C9orf85-202ENST00000377027 RIMS2Q9UQ26 1411 aa14.75□□□□□ -0.05
C9orf85-202ENST00000377027 PLEKHG1Q9ULL1 1385 aa14.74□□□□□ -0.05
C9orf85-202ENST00000377027 NRXN3Q9Y4C0 1643 aa14.74□□□□□ -0.05
C9orf85-202ENST00000377027 KCNA6P17658 529 aa14.74□□□□□ -0.05
C9orf85-202ENST00000377027 SPHKAPQ2M3C7 1700 aa14.74□□□□□ -0.05
C9orf85-202ENST00000377027 ADAMTS13Q76LX8 1427 aa14.74□□□□□ -0.05
C9orf85-202ENST00000377027 RGL2O15211 777 aa14.73□□□□□ -0.05
C9orf85-202ENST00000377027 PPARGC1BQ86YN6 1023 aaKnown RBP14.73□□□□□ -0.05
C9orf85-202ENST00000377027 FAM135BQ49AJ0 1406 aa14.73□□□□□ -0.05
C9orf85-202ENST00000377027 RIOK3O14730 519 aaKnown RBP14.7□□□□□ -0.06
C9orf85-202ENST00000377027 TRPC6Q9Y210 931 aa14.7□□□□□ -0.06
C9orf85-202ENST00000377027 DIP2AQ14689 1571 aa14.69□□□□□ -0.06
C9orf85-202ENST00000377027 RGS17Q9UGC6 210 aaPredicted RBP14.69□□□□□ -0.06
C9orf85-202ENST00000377027 CLTCL1P53675 1640 aa14.68□□□□□ -0.06
C9orf85-202ENST00000377027 PROSER2Q86WR7 435 aaPredicted RBP14.68□□□□□ -0.06
C9orf85-202ENST00000377027 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.68□□□□□ -0.06
C9orf85-202ENST00000377027 NUP155O75694 1391 aa14.68□□□□□ -0.06
C9orf85-202ENST00000377027 PTPRUQ92729 1446 aa14.67□□□□□ -0.06
C9orf85-202ENST00000377027 RRBP1Q9P2E9 1410 aaKnown RBP14.67□□□□□ -0.06
C9orf85-202ENST00000377027 COL16A1Q07092 1604 aaPredicted RBP14.67□□□□□ -0.06
C9orf85-202ENST00000377027 PHLPP1O60346 1717 aa14.67□□□□□ -0.06
C9orf85-202ENST00000377027 XRN1Q8IZH2 1706 aaKnown RBP14.67□□□□□ -0.06
C9orf85-202ENST00000377027 ITGAEP38570 1179 aa14.67□□□□□ -0.06
C9orf85-202ENST00000377027 NUTM2DQ5VT03 806 aaPredicted RBP14.67□□□□□ -0.06
C9orf85-202ENST00000377027 SETBP1Q9Y6X0 1596 aa14.65□□□□□ -0.06
C9orf85-202ENST00000377027 TBX22Q9Y458 520 aa14.64□□□□□ -0.07
C9orf85-202ENST00000377027 NAIPQ13075 1403 aa14.64□□□□□ -0.07
C9orf85-202ENST00000377027 TRPM2O94759 1503 aa14.63□□□□□ -0.07
C9orf85-202ENST00000377027 NEXMIFQ5QGS0 1516 aa14.63□□□□□ -0.07
C9orf85-202ENST00000377027 CHGAP10645 457 aaKnown RBP14.63□□□□□ -0.07
C9orf85-202ENST00000377027 SETD1AO15047 1707 aaKnown RBP14.63□□□□□ -0.07
C9orf85-202ENST00000377027 MSH6P52701 1360 aa14.62□□□□□ -0.07
C9orf85-202ENST00000377027 TIE1P35590 1138 aa14.62□□□□□ -0.07
C9orf85-202ENST00000377027 PDAP1Q13442 181 aaKnown RBP14.62□□□□□ -0.07
C9orf85-202ENST00000377027 DCBLD2Q96PD2 775 aa14.62□□□□□ -0.07
C9orf85-202ENST00000377027 VGFO15240 615 aaPredicted RBP14.61□□□□□ -0.07
C9orf85-202ENST00000377027 PPP1R15AO75807 674 aaPredicted RBP14.61□□□□□ -0.07
C9orf85-202ENST00000377027 BCANQ96GW7 911 aa14.61□□□□□ -0.07
C9orf85-202ENST00000377027 BMP2KQ9NSY1 1161 aaPredicted RBP14.61□□□□□ -0.07
C9orf85-202ENST00000377027 NCOA3Q9Y6Q9 1424 aa14.6□□□□□ -0.07
C9orf85-202ENST00000377027 PSEN1P49768 467 aa14.6□□□□□ -0.07
C9orf85-202ENST00000377027 PIK3R4Q99570 1358 aa14.6□□□□□ -0.07
C9orf85-202ENST00000377027 KIF1BO60333 1816 aa14.59□□□□□ -0.07
C9orf85-202ENST00000377027 AHDC1Q5TGY3 1603 aaPredicted RBP14.59□□□□□ -0.07
C9orf85-202ENST00000377027 NALCNQ8IZF0 1738 aa14.59□□□□□ -0.07
C9orf85-202ENST00000377027 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.59□□□□□ -0.07
C9orf85-202ENST00000377027 SLAIN2Q9P270 581 aa14.59□□□□□ -0.07
C9orf85-202ENST00000377027 LRP6O75581 1613 aa14.59□□□□□ -0.07
C9orf85-202ENST00000377027 POTEIP0CG38 1075 aa14.58□□□□□ -0.08
C9orf85-202ENST00000377027 TMEM106CQ9BVX2 250 aa14.58□□□□□ -0.08
C9orf85-202ENST00000377027 TAOK2Q9UL54 1235 aa14.58□□□□□ -0.08
C9orf85-202ENST00000377027 SHPRHQ149N8 1683 aa14.58□□□□□ -0.08
C9orf85-202ENST00000377027 TTLL13PA6NNM8 815 aa14.57□□□□□ -0.08
C9orf85-202ENST00000377027 ASTLQ6HA08 431 aaPredicted RBP14.57□□□□□ -0.08
C9orf85-202ENST00000377027 METP08581 1390 aa14.57□□□□□ -0.08
C9orf85-202ENST00000377027 ATMINO43313 823 aaPredicted RBP14.56□□□□□ -0.08
C9orf85-202ENST00000377027 POTEAQ6S8J7 498 aa14.56□□□□□ -0.08
C9orf85-202ENST00000377027 NHSL1Q5SYE7 1610 aa14.55□□□□□ -0.08
C9orf85-202ENST00000377027 HDGFP51858 240 aaKnown RBP14.55□□□□□ -0.08
C9orf85-202ENST00000377027 AMOTL2Q9Y2J4 779 aa14.55□□□□□ -0.08
C9orf85-202ENST00000377027 HFM1A2PYH4 1435 aa14.55□□□□□ -0.08
C9orf85-202ENST00000377027 PPLO60437 1756 aa14.55□□□□□ -0.08
C9orf85-202ENST00000377027 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.54□□□□□ -0.08
C9orf85-202ENST00000377027 ZFP91Q96JP5 570 aaPredicted RBP14.54□□□□□ -0.08
C9orf85-202ENST00000377027 ASXL1Q8IXJ9 1541 aa14.52□□□□□ -0.08
C9orf85-202ENST00000377027 DCCP43146 1447 aa14.52□□□□□ -0.08
C9orf85-202ENST00000377027 MST1RQ04912 1400 aa14.52□□□□□ -0.08
C9orf85-202ENST00000377027 JCADQ9P266 1359 aa14.52□□□□□ -0.08
C9orf85-202ENST00000377027 ATN1P54259 1190 aaPredicted RBP14.52□□□□□ -0.09
C9orf85-202ENST00000377027 C19orf44Q9H6X5 657 aa14.51□□□□□ -0.09
C9orf85-202ENST00000377027 IFT172Q9UG01 1749 aa14.5□□□□□ -0.09
C9orf85-202ENST00000377027 BRINP3Q76B58 766 aa14.49□□□□□ -0.09
C9orf85-202ENST00000377027 ADGRL3Q9HAR2 1447 aa14.49□□□□□ -0.09
C9orf85-202ENST00000377027 ZNF326Q5BKZ1 582 aaKnown RBP14.48□□□□□ -0.09
C9orf85-202ENST00000377027 CADPS2Q86UW7 1296 aa14.48□□□□□ -0.09
C9orf85-202ENST00000377027 PELP1Q8IZL8 1130 aaKnown RBP14.48□□□□□ -0.09
C9orf85-202ENST00000377027 LAMC1P11047 1609 aa14.48□□□□□ -0.09
C9orf85-202ENST00000377027 C14orf37Q86TY3 774 aa14.47□□□□□ -0.09
C9orf85-202ENST00000377027 TRIM35Q9UPQ4 493 aa14.47□□□□□ -0.09
C9orf85-202ENST00000377027 PRAG1Q86YV5 1406 aa14.47□□□□□ -0.09
C9orf85-202ENST00000377027 STK25O00506 426 aa14.46□□□□□ -0.09
C9orf85-202ENST00000377027 ATF3P18847 181 aa14.46□□□□□ -0.09
C9orf85-202ENST00000377027 BCL11BQ9C0K0 894 aaPredicted RBP14.46□□□□□ -0.09
C9orf85-202ENST00000377027 PTCH1Q13635 1447 aa14.46□□□□□ -0.09
C9orf85-202ENST00000377027 ROBO2Q9HCK4 1378 aa14.45□□□□□ -0.1
C9orf85-202ENST00000377027 SETD5Q9C0A6 1442 aa14.44□□□□□ -0.1
C9orf85-202ENST00000377027 SPATA31A6Q5VVP1 1343 aa14.43□□□□□ -0.1
C9orf85-202ENST00000377027 DDX17Q92841 729 aaKnown RBP14.43□□□□□ -0.1
C9orf85-202ENST00000377027 HS6ST3Q8IZP7 471 aa14.42□□□□□ -0.1
C9orf85-202ENST00000377027 CABP2Q9NPB3 220 aa14.42□□□□□ -0.1
C9orf85-202ENST00000377027 STK24Q9Y6E0 443 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms