RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 SLC4A3P48751 1232 aa13.45□□□□□ -0.26
MDC1-201ENST00000376406 GNAI1P63096 354 aa13.45□□□□□ -0.26
MDC1-201ENST00000376406 AKNAQ7Z591 1439 aa13.45□□□□□ -0.26
MDC1-201ENST00000376406 CDK13Q14004 1512 aaKnown RBP13.44□□□□□ -0.26
MDC1-201ENST00000376406 SYTL4Q96C24 671 aaPredicted RBP13.44□□□□□ -0.26
MDC1-201ENST00000376406 CLSTN1O94985 981 aa13.44□□□□□ -0.26
MDC1-201ENST00000376406 VPS37DQ86XT2 251 aa13.44□□□□□ -0.26
MDC1-201ENST00000376406 PBRM1Q86U86 1689 aa13.43□□□□□ -0.26
MDC1-201ENST00000376406 ADGRL1O94910 1474 aa13.43□□□□□ -0.26
MDC1-201ENST00000376406 ABTB2Q8N961 1025 aa13.43□□□□□ -0.26
MDC1-201ENST00000376406 GAS2L2Q8NHY3 880 aa13.43□□□□□ -0.26
MDC1-201ENST00000376406 ERBINQ96RT1 1412 aa13.43□□□□□ -0.26
MDC1-201ENST00000376406 RUFY2Q8WXA3 655 aa13.43□□□□□ -0.26
MDC1-201ENST00000376406 HSP90AB4PQ58FF6 505 aa13.42□□□□□ -0.26
MDC1-201ENST00000376406 ADAMTS8Q9UP79 889 aa13.42□□□□□ -0.26
MDC1-201ENST00000376406 RAPGEF6Q8TEU7 1601 aa13.42□□□□□ -0.26
MDC1-201ENST00000376406 PPP2R1AP30153 589 aa13.42□□□□□ -0.26
MDC1-201ENST00000376406 DDX49Q9Y6V7 483 aaKnown RBP13.42□□□□□ -0.26
MDC1-201ENST00000376406 NINLQ9Y2I6 1382 aa13.41□□□□□ -0.26
MDC1-201ENST00000376406 H3BQV1 296 aa13.41□□□□□ -0.26
MDC1-201ENST00000376406 PLEKHO1Q53GL0 409 aaPredicted RBP13.41□□□□□ -0.26
MDC1-201ENST00000376406 IFFO2Q5TF58 517 aa13.41□□□□□ -0.26
MDC1-201ENST00000376406 FAM135AQ9P2D6 1515 aa13.41□□□□□ -0.26
MDC1-201ENST00000376406 NLRP6P59044 892 aa13.41□□□□□ -0.26
MDC1-201ENST00000376406 ESCO1Q5FWF5 840 aa13.41□□□□□ -0.26
MDC1-201ENST00000376406 INTS3Q68E01 1043 aaKnown RBP13.41□□□□□ -0.26
MDC1-201ENST00000376406 DIAPH3Q9NSV4 1193 aa13.41□□□□□ -0.26
MDC1-201ENST00000376406 CAMSAP2Q08AD1 1489 aa13.41□□□□□ -0.26
MDC1-201ENST00000376406 NAIPQ13075 1403 aa13.4□□□□□ -0.26
MDC1-201ENST00000376406 CHMP5Q9NZZ3 219 aa13.4□□□□□ -0.26
MDC1-201ENST00000376406 CPLX2Q6PUV4 134 aaKnown RBP13.4□□□□□ -0.26
MDC1-201ENST00000376406 FOXD4L5Q5VV16 416 aaPredicted RBP13.4□□□□□ -0.26
MDC1-201ENST00000376406 FOXD4L4Q8WXT5 416 aaPredicted RBP13.4□□□□□ -0.26
MDC1-201ENST00000376406 CTDP1Q9Y5B0 961 aaPredicted RBP13.4□□□□□ -0.26
MDC1-201ENST00000376406 RBM33Q96EV2 1170 aaKnown RBP13.4□□□□□ -0.26
MDC1-201ENST00000376406 CFAP65Q6ZU64 1925 aaKnown RBP13.39□□□□□ -0.27
MDC1-201ENST00000376406 DENND4BO75064 1496 aaPredicted RBP13.39□□□□□ -0.27
MDC1-201ENST00000376406 SYNE3Q6ZMZ3 975 aa13.39□□□□□ -0.27
MDC1-201ENST00000376406 CABP2Q9NPB3 220 aa13.39□□□□□ -0.27
MDC1-201ENST00000376406 RSPH6AQ9H0K4 717 aa13.39□□□□□ -0.27
MDC1-201ENST00000376406 LRPPRCP42704 1394 aaKnown RBP13.39□□□□□ -0.27
MDC1-201ENST00000376406 AKAP17AQ02040 695 aaKnown RBP13.39□□□□□ -0.27
MDC1-201ENST00000376406 URB2Q14146 1524 aaKnown RBP13.39□□□□□ -0.27
MDC1-201ENST00000376406 ATAD2Q6PL18 1390 aa13.39□□□□□ -0.27
MDC1-201ENST00000376406 NLRP2Q9NX02 1062 aa13.38□□□□□ -0.27
MDC1-201ENST00000376406 PANK1Q8TE04 598 aa13.38□□□□□ -0.27
MDC1-201ENST00000376406 FAM184AQ8NB25 1140 aa13.38□□□□□ -0.27
MDC1-201ENST00000376406 KIF6Q6ZMV9 814 aa13.38□□□□□ -0.27
MDC1-201ENST00000376406 NBPF8Q3BBV2 869 aa13.37□□□□□ -0.27
MDC1-201ENST00000376406 TATP17735 454 aaPredicted RBP13.37□□□□□ -0.27
MDC1-201ENST00000376406 C22orf23Q9BZE7 217 aa13.37□□□□□ -0.27
MDC1-201ENST00000376406 SF3A1Q15459 793 aaKnown RBP13.36□□□□□ -0.27
MDC1-201ENST00000376406 PNISRQ8TF01 805 aaKnown RBP13.36□□□□□ -0.27
MDC1-201ENST00000376406 TSPYL4Q9UJ04 414 aa13.36□□□□□ -0.27
MDC1-201ENST00000376406 IFIT2P09913 472 aaKnown RBP13.36□□□□□ -0.27
MDC1-201ENST00000376406 ZKSCAN1P17029 563 aaPredicted RBP13.36□□□□□ -0.27
MDC1-201ENST00000376406 EIF2S2P20042 333 aaKnown RBP13.36□□□□□ -0.27
MDC1-201ENST00000376406 ARHGEF11O15085 1522 aa13.36□□□□□ -0.27
MDC1-201ENST00000376406 MTHFSP49914 203 aa13.36□□□□□ -0.27
MDC1-201ENST00000376406 HMOX1P09601 288 aa13.35□□□□□ -0.27
MDC1-201ENST00000376406 RTEL1-TNFRSF6BF6WH68 1400 aa13.35□□□□□ -0.27
MDC1-201ENST00000376406 GGNBP2Q9H3C7 697 aa13.35□□□□□ -0.27
MDC1-201ENST00000376406 MARCH6O60337 910 aa13.35□□□□□ -0.27
MDC1-201ENST00000376406 NUCB2P80303 420 aa13.35□□□□□ -0.27
MDC1-201ENST00000376406 TCEAL9Q9UHQ7 104 aa13.35□□□□□ -0.27
MDC1-201ENST00000376406 FANCAO15360 1455 aa13.35□□□□□ -0.27
MDC1-201ENST00000376406 FKBP5Q13451 457 aaPredicted RBP13.35□□□□□ -0.27
MDC1-201ENST00000376406 SPG7Q9UQ90 795 aa13.35□□□□□ -0.27
MDC1-201ENST00000376406 TMEM132EQ6IEE7 984 aa13.34□□□□□ -0.27
MDC1-201ENST00000376406 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.34□□□□□ -0.27
MDC1-201ENST00000376406 CFAP74Q9C0B2 1584 aa13.34□□□□□ -0.27
MDC1-201ENST00000376406 ANO2Q9NQ90 1003 aa13.34□□□□□ -0.27
MDC1-201ENST00000376406 PDE3AQ14432 1141 aa13.34□□□□□ -0.27
MDC1-201ENST00000376406 CFAP70Q5T0N1 1121 aa13.34□□□□□ -0.27
MDC1-201ENST00000376406 KCNH5Q8NCM2 988 aa13.34□□□□□ -0.27
MDC1-201ENST00000376406 G3BP1Q13283 466 aaKnown RBP eCLIP13.34□□□□□ -0.27
MDC1-201ENST00000376406 NBPF1Q3BBV0 1214 aa13.34□□□□□ -0.27
MDC1-201ENST00000376406 CDCA7LQ96GN5 454 aa13.34□□□□□ -0.27
MDC1-201ENST00000376406 CDC45O75419 566 aa13.34□□□□□ -0.27
MDC1-201ENST00000376406 RNF20Q5VTR2 975 aa13.34□□□□□ -0.27
MDC1-201ENST00000376406 TCP11L2Q8N4U5 519 aa13.33□□□□□ -0.28
MDC1-201ENST00000376406 GOLGA6L19H0YKK7 550 aa13.33□□□□□ -0.28
MDC1-201ENST00000376406 RAPGEF3O95398 923 aa13.33□□□□□ -0.28
MDC1-201ENST00000376406 RASSF8Q8NHQ8 419 aa13.33□□□□□ -0.28
MDC1-201ENST00000376406 TOMM22Q9NS69 142 aa13.33□□□□□ -0.28
MDC1-201ENST00000376406 ERC2O15083 957 aa13.32□□□□□ -0.28
MDC1-201ENST00000376406 PRAM1Q96QH2 718 aa13.32□□□□□ -0.28
MDC1-201ENST00000376406 LNPKQ9C0E8 428 aa13.32□□□□□ -0.28
MDC1-201ENST00000376406 TRDNQ13061 729 aa13.32□□□□□ -0.28
MDC1-201ENST00000376406 RIC3Q7Z5B4 369 aa13.32□□□□□ -0.28
MDC1-201ENST00000376406 CT47B1P0C2W7 299 aaPredicted RBP13.32□□□□□ -0.28
MDC1-201ENST00000376406 CCDC30Q5VVM6 783 aa13.32□□□□□ -0.28
MDC1-201ENST00000376406 NECTIN2Q92692 538 aa13.31□□□□□ -0.28
MDC1-201ENST00000376406 WDR63Q8IWG1 891 aa13.3□□□□□ -0.28
MDC1-201ENST00000376406 NFKBIBQ15653 356 aa13.3□□□□□ -0.28
MDC1-201ENST00000376406 CWC22Q9HCG8 908 aaKnown RBP13.3□□□□□ -0.28
MDC1-201ENST00000376406 ERICH2A1L162 156 aa13.29□□□□□ -0.28
MDC1-201ENST00000376406 ABCC5O15440 1437 aa13.29□□□□□ -0.28
MDC1-201ENST00000376406 CFAP43Q8NDM7 1665 aa13.29□□□□□ -0.28
MDC1-201ENST00000376406 CDK19Q9BWU1 502 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms