RNA–Protein interactions for RNA: ENST00000376286.8

PCCA-203, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 2 BASIC

Gene PCCA, Length 2,481 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-203ENST00000376286 SHROOM2Q13796 1616 aa23.65■■□□□ 1.38
PCCA-203ENST00000376286 TET3O43151 1660 aa23.65■■□□□ 1.38
PCCA-203ENST00000376286 RTEL1-TNFRSF6BF6WH68 1400 aa23.64■■□□□ 1.38
PCCA-203ENST00000376286 ABCA6Q8N139 1617 aa23.64■■□□□ 1.37
PCCA-203ENST00000376286 MAP3K4Q9Y6R4 1608 aa23.64■■□□□ 1.37
PCCA-203ENST00000376286 IQSEC2Q5JU85 1478 aa23.64■■□□□ 1.37
PCCA-203ENST00000376286 KANK1Q14678 1352 aa23.64■■□□□ 1.37
PCCA-203ENST00000376286 SHPRHQ149N8 1683 aa23.63■■□□□ 1.37
PCCA-203ENST00000376286 NSD3Q9BZ95 1437 aa23.63■■□□□ 1.37
PCCA-203ENST00000376286 MYOM2P54296 1465 aa23.63■■□□□ 1.37
PCCA-203ENST00000376286 SPRYD3Q8NCJ5 442 aa23.62■■□□□ 1.37
PCCA-203ENST00000376286 ZFYVE16Q7Z3T8 1539 aa23.62■■□□□ 1.37
PCCA-203ENST00000376286 DEPDC5O75140 1603 aa23.62■■□□□ 1.37
PCCA-203ENST00000376286 ARXQ96QS3 562 aa23.61■■□□□ 1.37
PCCA-203ENST00000376286 SBNO2Q9Y2G9 1366 aa23.61■■□□□ 1.37
PCCA-203ENST00000376286 NEURL4Q96JN8 1562 aa23.6■■□□□ 1.37
PCCA-203ENST00000376286 GOLGA6L3A6NEY3 463 aa23.6■■□□□ 1.37
PCCA-203ENST00000376286 MCM4P33991 863 aa23.6■■□□□ 1.37
PCCA-203ENST00000376286 MVPQ14764 893 aaKnown RBP23.59■■□□□ 1.37
PCCA-203ENST00000376286 XRCC6P12956 609 aaKnown RBP eCLIP23.58■■□□□ 1.37
PCCA-203ENST00000376286 CCDC27Q2M243 656 aa23.58■■□□□ 1.37
PCCA-203ENST00000376286 MYH16Q9H6N6 1097 aa23.57■■□□□ 1.36
PCCA-203ENST00000376286 UGGT1Q9NYU2 1555 aa23.57■■□□□ 1.36
PCCA-203ENST00000376286 FSD2A1L4K1 749 aa23.56■■□□□ 1.36
PCCA-203ENST00000376286 C22orf23Q9BZE7 217 aa23.56■■□□□ 1.36
PCCA-203ENST00000376286 ERCC6L2Q5T890 1561 aa23.56■■□□□ 1.36
PCCA-203ENST00000376286 KIF3BO15066 747 aa23.55■■□□□ 1.36
PCCA-203ENST00000376286 GZF1Q9H116 711 aaPredicted RBP23.55■■□□□ 1.36
PCCA-203ENST00000376286 SLC12A5Q9H2X9 1139 aa23.55■■□□□ 1.36
PCCA-203ENST00000376286 MYO3AQ8NEV4 1616 aa23.55■■□□□ 1.36
PCCA-203ENST00000376286 VWDEQ8N2E2 1590 aa23.55■■□□□ 1.36
PCCA-203ENST00000376286 MTHFSP49914 203 aa23.55■■□□□ 1.36
PCCA-203ENST00000376286 ZKSCAN2Q63HK3 967 aa23.55■■□□□ 1.36
PCCA-203ENST00000376286 FTSJ3Q8IY81 847 aaKnown RBP23.55■■□□□ 1.36
PCCA-203ENST00000376286 CHMP5Q9NZZ3 219 aa23.55■■□□□ 1.36
PCCA-203ENST00000376286 CFAP53Q96M91 514 aa23.54■■□□□ 1.36
PCCA-203ENST00000376286 MFAP1P55081 439 aaKnown RBP23.54■■□□□ 1.36
PCCA-203ENST00000376286 ZNF518AQ6AHZ1 1483 aa23.53■■□□□ 1.36
PCCA-203ENST00000376286 DZIP1LQ8IYY4 767 aaKnown RBP23.53■■□□□ 1.36
PCCA-203ENST00000376286 ZCCHC11Q5TAX3 1644 aaKnown RBP23.52■■□□□ 1.36
PCCA-203ENST00000376286 CHD1O14646 1710 aa23.52■■□□□ 1.36
PCCA-203ENST00000376286 TRAK2O60296 914 aa23.5■■□□□ 1.35
PCCA-203ENST00000376286 PANK2Q9BZ23 570 aa23.5■■□□□ 1.35
PCCA-203ENST00000376286 TRAK1Q9UPV9 953 aa23.5■■□□□ 1.35
PCCA-203ENST00000376286 NRXN1Q9ULB1 1477 aa23.49■■□□□ 1.35
PCCA-203ENST00000376286 KIF1BO60333 1816 aa23.48■■□□□ 1.35
PCCA-203ENST00000376286 NCBP3Q53F19 620 aaKnown RBP23.48■■□□□ 1.35
PCCA-203ENST00000376286 ATP7AQ04656 1500 aa23.48■■□□□ 1.35
PCCA-203ENST00000376286 U2AF1L5P0DN76 240 aaPredicted RBP23.47■■□□□ 1.35
PCCA-203ENST00000376286 U2AF1Q01081 240 aaKnown RBP eCLIP23.47■■□□□ 1.351e-7■■■■■ 30.6
PCCA-203ENST00000376286 IFT172Q9UG01 1749 aa23.47■■□□□ 1.35
PCCA-203ENST00000376286 CT47B1P0C2W7 299 aaPredicted RBP23.46■■□□□ 1.35
PCCA-203ENST00000376286 HDAC1Q13547 482 aaPredicted RBP23.46■■□□□ 1.35
PCCA-203ENST00000376286 HSCBQ8IWL3 235 aa23.46■■□□□ 1.35
PCCA-203ENST00000376286 SMC4Q9NTJ3 1288 aa23.46■■□□□ 1.35
PCCA-203ENST00000376286 NOS1P29475 1434 aa23.46■■□□□ 1.35
PCCA-203ENST00000376286 TSR2Q969E8 191 aaKnown RBP23.45■■□□□ 1.35
PCCA-203ENST00000376286 ARAP3Q8WWN8 1544 aa23.45■■□□□ 1.34
PCCA-203ENST00000376286 MRE11P49959 708 aa23.44■■□□□ 1.34
PCCA-203ENST00000376286 MROH2AA6NES4 1674 aa23.44■■□□□ 1.34
PCCA-203ENST00000376286 SETBP1Q9Y6X0 1596 aa23.44■■□□□ 1.34
PCCA-203ENST00000376286 TRIM27P14373 513 aa23.43■■□□□ 1.34
PCCA-203ENST00000376286 CLCN1P35523 988 aa23.43■■□□□ 1.34
PCCA-203ENST00000376286 DDX19BQ9UMR2 479 aa23.43■■□□□ 1.34
PCCA-203ENST00000376286 INO80Q9ULG1 1556 aaPredicted RBP23.43■■□□□ 1.34
PCCA-203ENST00000376286 ITPRIPQ8IWB1 547 aa23.43■■□□□ 1.34
PCCA-203ENST00000376286 PNNQ9H307 717 aaKnown RBP23.43■■□□□ 1.34
PCCA-203ENST00000376286 DDX11L8A8MPP1 907 aa23.42■■□□□ 1.34
PCCA-203ENST00000376286 CHGAP10645 457 aaKnown RBP23.42■■□□□ 1.34
PCCA-203ENST00000376286 USP32Q8NFA0 1604 aa23.42■■□□□ 1.34
PCCA-203ENST00000376286 MROH1Q8NDA8 1641 aa23.42■■□□□ 1.34
PCCA-203ENST00000376286 EXOSC9Q06265 439 aaKnown RBP23.41■■□□□ 1.34
PCCA-203ENST00000376286 EFCAB6Q5THR3 1501 aa23.41■■□□□ 1.34
PCCA-203ENST00000376286 UHRF1BP1LA0JNW5 1464 aa23.41■■□□□ 1.34
PCCA-203ENST00000376286 ZNF692Q9BU19 519 aaPredicted RBP23.41■■□□□ 1.34
PCCA-203ENST00000376286 QRICH2Q9H0J4 1663 aa23.41■■□□□ 1.34
PCCA-203ENST00000376286 ADGRL1O94910 1474 aa23.41■■□□□ 1.34
PCCA-203ENST00000376286 SMC5Q8IY18 1101 aa23.4■■□□□ 1.34
PCCA-203ENST00000376286 NAP1L5Q96NT1 182 aaPredicted RBP23.4■■□□□ 1.34
PCCA-203ENST00000376286 ADGRB2O60241 1585 aa23.4■■□□□ 1.34
PCCA-203ENST00000376286 SSH1Q8WYL5 1049 aa23.39■■□□□ 1.34
PCCA-203ENST00000376286 ZC3H13Q5T200 1668 aaKnown RBP23.39■■□□□ 1.34
PCCA-203ENST00000376286 ATF7IPQ6VMQ6 1270 aa23.39■■□□□ 1.33
PCCA-203ENST00000376286 C14orf93Q9H972 538 aaKnown RBP23.39■■□□□ 1.33
PCCA-203ENST00000376286 TMEM132EQ6IEE7 984 aa23.38■■□□□ 1.33
PCCA-203ENST00000376286 GRPEL1Q9HAV7 217 aa23.38■■□□□ 1.33
PCCA-203ENST00000376286 ADGRB3O60242 1522 aa23.37■■□□□ 1.33
PCCA-203ENST00000376286 FANCAO15360 1455 aa23.36■■□□□ 1.33
PCCA-203ENST00000376286 NCOA3Q9Y6Q9 1424 aa23.36■■□□□ 1.33
PCCA-203ENST00000376286 NSD2O96028 1365 aa23.36■■□□□ 1.33
PCCA-203ENST00000376286 NOB1Q9ULX3 412 aaKnown RBP23.36■■□□□ 1.33
PCCA-203ENST00000376286 DDIT3P35638 169 aa23.35■■□□□ 1.33
PCCA-203ENST00000376286 RBM25P49756 843 aaKnown RBP23.35■■□□□ 1.33
PCCA-203ENST00000376286 ISY1Q9ULR0 285 aaKnown RBP23.35■■□□□ 1.33
PCCA-203ENST00000376286 ADGRB1O14514 1584 aa23.35■■□□□ 1.33
PCCA-203ENST00000376286 ANKRD36BQ8N2N9 1353 aa23.34■■□□□ 1.33
PCCA-203ENST00000376286 PPRC1Q5VV67 1664 aaKnown RBP23.34■■□□□ 1.33
PCCA-203ENST00000376286 TMEM57Q8N5G2 664 aa23.34■■□□□ 1.33
PCCA-203ENST00000376286 TMPOP42166 694 aaKnown RBP23.34■■□□□ 1.33
PCCA-203ENST00000376286 SNX21Q969T3 373 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms