RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 GPRASP1Q5JY77 1395 aa15.65■□□□□ 0.1
C9orf3-203ENST00000375315 SRPK2P78362 688 aaKnown RBP15.65■□□□□ 0.1
C9orf3-203ENST00000375315 SLC12A5Q9H2X9 1139 aa15.65■□□□□ 0.1
C9orf3-203ENST00000375315 FAM161AQ3B820 660 aa15.64■□□□□ 0.09
C9orf3-203ENST00000375315 PRAM1Q96QH2 718 aa15.64■□□□□ 0.09
C9orf3-203ENST00000375315 KNSTRNQ9Y448 316 aa15.64■□□□□ 0.09
C9orf3-203ENST00000375315 MADDQ8WXG6 1647 aa15.63■□□□□ 0.09
C9orf3-203ENST00000375315 SCAF11Q99590 1463 aaKnown RBP15.63■□□□□ 0.09
C9orf3-203ENST00000375315 ERVK-7P63135 1459 aa15.63■□□□□ 0.09
C9orf3-203ENST00000375315 TXNDC2Q86VQ3 553 aa15.63■□□□□ 0.09
C9orf3-203ENST00000375315 SLC24A1O60721 1099 aa15.62■□□□□ 0.09
C9orf3-203ENST00000375315 PDE3BQ13370 1112 aa15.62■□□□□ 0.09
C9orf3-203ENST00000375315 STAC3Q96MF2 364 aa15.62■□□□□ 0.09
C9orf3-203ENST00000375315 RPGRIP1LQ68CZ1 1315 aa15.62■□□□□ 0.09
C9orf3-203ENST00000375315 POLR1AO95602 1720 aaPredicted RBP15.62■□□□□ 0.09
C9orf3-203ENST00000375315 EIF3AQ14152 1382 aaKnown RBP15.61■□□□□ 0.09
C9orf3-203ENST00000375315 ARHGEF40Q8TER5 1519 aa15.61■□□□□ 0.09
C9orf3-203ENST00000375315 TNRQ92752 1358 aa15.6■□□□□ 0.09
C9orf3-203ENST00000375315 ADGRB3O60242 1522 aa15.6■□□□□ 0.09
C9orf3-203ENST00000375315 ARHGAP31Q2M1Z3 1444 aa15.6■□□□□ 0.09
C9orf3-203ENST00000375315 KTN1Q86UP2 1357 aaKnown RBP15.59■□□□□ 0.09
C9orf3-203ENST00000375315 SKAP1Q86WV1 359 aa15.59■□□□□ 0.09
C9orf3-203ENST00000375315 RBM33Q96EV2 1170 aaKnown RBP15.59■□□□□ 0.09
C9orf3-203ENST00000375315 PPP6R1Q9UPN7 881 aa15.59■□□□□ 0.09
C9orf3-203ENST00000375315 LRPPRCP42704 1394 aaKnown RBP15.58■□□□□ 0.09
C9orf3-203ENST00000375315 LTKP29376 864 aa15.58■□□□□ 0.08
C9orf3-203ENST00000375315 CDCA8Q53HL2 280 aa15.58■□□□□ 0.08
C9orf3-203ENST00000375315 PIK3C2GO75747 1445 aa15.57■□□□□ 0.08
C9orf3-203ENST00000375315 RIMS2Q9UQ26 1411 aa15.57■□□□□ 0.08
C9orf3-203ENST00000375315 PER1O15534 1290 aaPredicted RBP15.57■□□□□ 0.08
C9orf3-203ENST00000375315 CRBNQ96SW2 442 aa15.57■□□□□ 0.08
C9orf3-203ENST00000375315 C8orf34Q49A92 452 aa15.57■□□□□ 0.08
C9orf3-203ENST00000375315 MYO5BQ9ULV0 1848 aa15.56■□□□□ 0.08
C9orf3-203ENST00000375315 PREX1Q8TCU6 1659 aa15.56■□□□□ 0.08
C9orf3-203ENST00000375315 GOLGA6L3A6NEY3 463 aa15.56■□□□□ 0.08
C9orf3-203ENST00000375315 CENPQQ7L2Z9 268 aaPredicted RBP15.56■□□□□ 0.08
C9orf3-203ENST00000375315 PIK3C2BO00750 1634 aa15.55■□□□□ 0.08
C9orf3-203ENST00000375315 AGLP35573 1532 aa15.54■□□□□ 0.08
C9orf3-203ENST00000375315 BRD4O60885 1362 aaPredicted RBP15.54■□□□□ 0.08
C9orf3-203ENST00000375315 MYOM2P54296 1465 aa15.54■□□□□ 0.08
C9orf3-203ENST00000375315 NCKAP5LQ9HCH0 1330 aa15.54■□□□□ 0.08
C9orf3-203ENST00000375315 BECN1Q14457 450 aa15.53■□□□□ 0.08
C9orf3-203ENST00000375315 CARD14Q9BXL6 1004 aa15.53■□□□□ 0.08
C9orf3-203ENST00000375315 PDCL3Q9H2J4 239 aa15.53■□□□□ 0.08
C9orf3-203ENST00000375315 XRCC6P12956 609 aaKnown RBP eCLIP15.53■□□□□ 0.08
C9orf3-203ENST00000375315 EID1Q9Y6B2 187 aa15.52■□□□□ 0.08
C9orf3-203ENST00000375315 KDM2BQ8NHM5 1336 aa15.52■□□□□ 0.08
C9orf3-203ENST00000375315 NEXMIFQ5QGS0 1516 aa15.52■□□□□ 0.08
C9orf3-203ENST00000375315 PLIN1O60240 522 aa15.52■□□□□ 0.08
C9orf3-203ENST00000375315 TPM2P07951 284 aa15.52■□□□□ 0.08
C9orf3-203ENST00000375315 A2ML1A8K2U0 1454 aa15.52■□□□□ 0.07
C9orf3-203ENST00000375315 PLEKHH1Q9ULM0 1364 aa15.51■□□□□ 0.07
C9orf3-203ENST00000375315 CALD1Q05682 793 aaKnown RBP15.51■□□□□ 0.07
C9orf3-203ENST00000375315 EVC2Q86UK5 1308 aa15.51■□□□□ 0.07
C9orf3-203ENST00000375315 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.5■□□□□ 0.072e-6■□□□□ 9.9
C9orf3-203ENST00000375315 ARXQ96QS3 562 aa15.5■□□□□ 0.07
C9orf3-203ENST00000375315 METP08581 1390 aa15.5■□□□□ 0.07
C9orf3-203ENST00000375315 MYBBP1AQ9BQG0 1328 aaKnown RBP15.5■□□□□ 0.07
C9orf3-203ENST00000375315 CDK19Q9BWU1 502 aa15.5■□□□□ 0.07
C9orf3-203ENST00000375315 HDGFP51858 240 aaKnown RBP15.5■□□□□ 0.07
C9orf3-203ENST00000375315 RALBP1Q15311 655 aa15.49■□□□□ 0.07
C9orf3-203ENST00000375315 RBM10P98175 930 aaKnown RBP15.49■□□□□ 0.07
C9orf3-203ENST00000375315 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.49■□□□□ 0.07
C9orf3-203ENST00000375315 ZC3H13Q5T200 1668 aaKnown RBP15.48■□□□□ 0.07
C9orf3-203ENST00000375315 TMEM131LA2VDJ0 1609 aa15.48■□□□□ 0.07
C9orf3-203ENST00000375315 FSD2A1L4K1 749 aa15.48■□□□□ 0.07
C9orf3-203ENST00000375315 CABP1Q9NZU7 370 aa15.48■□□□□ 0.07
C9orf3-203ENST00000375315 PPLO60437 1756 aa15.48■□□□□ 0.07
C9orf3-203ENST00000375315 FBLN1P23142 703 aa15.48■□□□□ 0.07
C9orf3-203ENST00000375315 YTHDC2Q9H6S0 1430 aaKnown RBP15.47■□□□□ 0.07
C9orf3-203ENST00000375315 GGNBP2Q9H3C7 697 aa15.47■□□□□ 0.07
C9orf3-203ENST00000375315 AMER1Q5JTC6 1135 aaPredicted RBP15.46■□□□□ 0.07
C9orf3-203ENST00000375315 MORC1Q86VD1 984 aa15.46■□□□□ 0.07
C9orf3-203ENST00000375315 NLRP13Q86W25 1043 aa15.46■□□□□ 0.07
C9orf3-203ENST00000375315 ESPNB1AK53 854 aa15.46■□□□□ 0.07
C9orf3-203ENST00000375315 SOX12O15370 315 aa15.46■□□□□ 0.07
C9orf3-203ENST00000375315 THEMISQ8N1K5 641 aaPredicted RBP15.46■□□□□ 0.07
C9orf3-203ENST00000375315 A0A0U1RQG5 324 aaPredicted RBP15.46■□□□□ 0.06
C9orf3-203ENST00000375315 SLKQ9H2G2 1235 aaPredicted RBP15.46■□□□□ 0.06
C9orf3-203ENST00000375315 TMEM2Q9UHN6 1383 aa15.45■□□□□ 0.06
C9orf3-203ENST00000375315 MRE11P49959 708 aa15.45■□□□□ 0.06
C9orf3-203ENST00000375315 PANK2Q9BZ23 570 aa15.45■□□□□ 0.06
C9orf3-203ENST00000375315 NRXN1Q9ULB1 1477 aa15.45■□□□□ 0.06
C9orf3-203ENST00000375315 RGS3P49796 1198 aa15.45■□□□□ 0.06
C9orf3-203ENST00000375315 PPP2R1AP30153 589 aa15.44■□□□□ 0.06
C9orf3-203ENST00000375315 CCDC146Q8IYE0 955 aa15.44■□□□□ 0.06
C9orf3-203ENST00000375315 CDCA7LQ96GN5 454 aa15.44■□□□□ 0.06
C9orf3-203ENST00000375315 REREQ9P2R6 1566 aa15.44■□□□□ 0.06
C9orf3-203ENST00000375315 IQGAP1P46940 1657 aa15.44■□□□□ 0.06
C9orf3-203ENST00000375315 MYH16Q9H6N6 1097 aa15.43■□□□□ 0.06
C9orf3-203ENST00000375315 ADGRB1O14514 1584 aa15.43■□□□□ 0.06
C9orf3-203ENST00000375315 AAMPQ13685 434 aa15.43■□□□□ 0.06
C9orf3-203ENST00000375315 IFT172Q9UG01 1749 aa15.43■□□□□ 0.06
C9orf3-203ENST00000375315 SPATA31D1Q6ZQQ2 1576 aa15.42■□□□□ 0.06
C9orf3-203ENST00000375315 NSD3Q9BZ95 1437 aa15.42■□□□□ 0.06
C9orf3-203ENST00000375315 AMOTL2Q9Y2J4 779 aa15.42■□□□□ 0.06
C9orf3-203ENST00000375315 WDR43Q15061 677 aaKnown RBP eCLIP15.41■□□□□ 0.06
C9orf3-203ENST00000375315 TRIM44Q96DX7 344 aaPredicted RBP15.41■□□□□ 0.06
C9orf3-203ENST00000375315 NEUROD2Q15784 382 aa15.41■□□□□ 0.06
C9orf3-203ENST00000375315 PRDM4Q9UKN5 801 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms