RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 SLC52A1Q9NWF4 448 aa18.49■□□□□ 0.55
HMGCL-203ENST00000374490 KDM5AP29375 1690 aaKnown RBP18.49■□□□□ 0.55
HMGCL-203ENST00000374490 NRXN1Q9ULB1 1477 aa18.49■□□□□ 0.55
HMGCL-203ENST00000374490 RPGRIP1LQ68CZ1 1315 aa18.48■□□□□ 0.55
HMGCL-203ENST00000374490 AMER1Q5JTC6 1135 aaPredicted RBP18.46■□□□□ 0.55
HMGCL-203ENST00000374490 MED14O60244 1454 aa18.46■□□□□ 0.55
HMGCL-203ENST00000374490 MYOM1P52179 1685 aa18.46■□□□□ 0.55
HMGCL-203ENST00000374490 SBNO2Q9Y2G9 1366 aa18.46■□□□□ 0.55
HMGCL-203ENST00000374490 PPP2R1AP30153 589 aa18.45■□□□□ 0.54
HMGCL-203ENST00000374490 HSPA1LP34931 641 aa18.45■□□□□ 0.54
HMGCL-203ENST00000374490 ERICH6Q7L0X2 663 aa18.45■□□□□ 0.54
HMGCL-203ENST00000374490 SETBP1Q9Y6X0 1596 aa18.45■□□□□ 0.54
HMGCL-203ENST00000374490 MSH5O43196 834 aa18.44■□□□□ 0.54
HMGCL-203ENST00000374490 WDR43Q15061 677 aaKnown RBP eCLIP18.44■□□□□ 0.54
HMGCL-203ENST00000374490 IDI1Q13907 227 aa18.43■□□□□ 0.54
HMGCL-203ENST00000374490 ADGRF5Q8IZF2 1346 aa18.43■□□□□ 0.54
HMGCL-203ENST00000374490 MYO5BQ9ULV0 1848 aa18.43■□□□□ 0.54
HMGCL-203ENST00000374490 TMEM131LA2VDJ0 1609 aa18.43■□□□□ 0.54
HMGCL-203ENST00000374490 NEXMIFQ5QGS0 1516 aa18.42■□□□□ 0.54
HMGCL-203ENST00000374490 SENP3-EIF4A1A0A087X0R7 540 aa18.39■□□□□ 0.53
HMGCL-203ENST00000374490 VGFO15240 615 aaPredicted RBP18.38■□□□□ 0.53
HMGCL-203ENST00000374490 CFAP70Q5T0N1 1121 aa18.38■□□□□ 0.53
HMGCL-203ENST00000374490 ADAMTS8Q9UP79 889 aa18.38■□□□□ 0.53
HMGCL-203ENST00000374490 SALL2Q9Y467 1007 aaPredicted RBP18.38■□□□□ 0.53
HMGCL-203ENST00000374490 EXOC6Q8TAG9 804 aa18.38■□□□□ 0.53
HMGCL-203ENST00000374490 STAG3Q9UJ98 1225 aa18.38■□□□□ 0.53
HMGCL-203ENST00000374490 NGEFQ8N5V2 710 aa18.37■□□□□ 0.53
HMGCL-203ENST00000374490 CDCA7LQ96GN5 454 aa18.37■□□□□ 0.53
HMGCL-203ENST00000374490 TCERG1O14776 1098 aaKnown RBP18.36■□□□□ 0.53
HMGCL-203ENST00000374490 TXNDC2Q86VQ3 553 aa18.35■□□□□ 0.53
HMGCL-203ENST00000374490 EID1Q9Y6B2 187 aa18.35■□□□□ 0.53
HMGCL-203ENST00000374490 ZFYVE9O95405 1425 aa18.35■□□□□ 0.53
HMGCL-203ENST00000374490 ZNF521Q96K83 1311 aa18.33■□□□□ 0.53
HMGCL-203ENST00000374490 CENPJQ9HC77 1338 aaPredicted RBP18.33■□□□□ 0.53
HMGCL-203ENST00000374490 LRRC7Q96NW7 1537 aa18.33■□□□□ 0.52
HMGCL-203ENST00000374490 MS4A1P11836 297 aa18.32■□□□□ 0.52
HMGCL-203ENST00000374490 PHF23Q9BUL5 403 aaPredicted RBP18.32■□□□□ 0.52
HMGCL-203ENST00000374490 C14orf93Q9H972 538 aaKnown RBP18.32■□□□□ 0.52
HMGCL-203ENST00000374490 LTKP29376 864 aa18.31■□□□□ 0.52
HMGCL-203ENST00000374490 ANP32AP39687 249 aaKnown RBP18.31■□□□□ 0.52
HMGCL-203ENST00000374490 MED1Q15648 1581 aaPredicted RBP18.31■□□□□ 0.52
HMGCL-203ENST00000374490 PLEKHH1Q9ULM0 1364 aa18.31■□□□□ 0.52
HMGCL-203ENST00000374490 GOLGA2Q08379 1002 aa18.31■□□□□ 0.52
HMGCL-203ENST00000374490 NUTM2DQ5VT03 806 aaPredicted RBP18.31■□□□□ 0.52
HMGCL-203ENST00000374490 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.31■□□□□ 0.52
HMGCL-203ENST00000374490 ADGRB1O14514 1584 aa18.3■□□□□ 0.52
HMGCL-203ENST00000374490 ARHGAP23Q9P227 1491 aa18.3■□□□□ 0.52
HMGCL-203ENST00000374490 SLIT1O75093 1534 aa18.3■□□□□ 0.52
HMGCL-203ENST00000374490 PUS7Q96PZ0 661 aaKnown RBP18.29■□□□□ 0.52
HMGCL-203ENST00000374490 SENP3Q9H4L4 574 aaPredicted RBP18.29■□□□□ 0.52
HMGCL-203ENST00000374490 POLR3AO14802 1390 aaPredicted RBP18.28■□□□□ 0.52
HMGCL-203ENST00000374490 TMEM2Q9UHN6 1383 aa18.28■□□□□ 0.52
HMGCL-203ENST00000374490 DUSP27Q5VZP5 1158 aa18.27■□□□□ 0.52
HMGCL-203ENST00000374490 USP32Q8NFA0 1604 aa18.27■□□□□ 0.52
HMGCL-203ENST00000374490 UBR1Q8IWV7 1749 aa18.27■□□□□ 0.51
HMGCL-203ENST00000374490 NOP58Q9Y2X3 529 aaKnown RBP18.27■□□□□ 0.51
HMGCL-203ENST00000374490 ALKQ9UM73 1620 aa18.27■□□□□ 0.51
HMGCL-203ENST00000374490 QRICH2Q9H0J4 1663 aa18.26■□□□□ 0.51
HMGCL-203ENST00000374490 RIMS2Q9UQ26 1411 aa18.25■□□□□ 0.51
HMGCL-203ENST00000374490 SLFN5Q08AF3 891 aa18.25■□□□□ 0.51
HMGCL-203ENST00000374490 CRBNQ96SW2 442 aa18.25■□□□□ 0.51
HMGCL-203ENST00000374490 CARD14Q9BXL6 1004 aa18.24■□□□□ 0.51
HMGCL-203ENST00000374490 TRMT2AQ8IZ69 625 aaKnown RBP18.23■□□□□ 0.51
HMGCL-203ENST00000374490 IPO9Q96P70 1041 aaKnown RBP18.23■□□□□ 0.51
HMGCL-203ENST00000374490 TMEM132EQ6IEE7 984 aa18.23■□□□□ 0.51
HMGCL-203ENST00000374490 ARHGEF28Q8N1W1 1705 aaKnown RBP18.22■□□□□ 0.51
HMGCL-203ENST00000374490 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.22■□□□□ 0.51
HMGCL-203ENST00000374490 TRAK1Q9UPV9 953 aa18.22■□□□□ 0.51
HMGCL-203ENST00000374490 E9PSI1 815 aa18.21■□□□□ 0.51
HMGCL-203ENST00000374490 NSD3Q9BZ95 1437 aa18.21■□□□□ 0.51
HMGCL-203ENST00000374490 NKTRP30414 1462 aaKnown RBP18.21■□□□□ 0.51
HMGCL-203ENST00000374490 STRCP1A6NGW2 1772 aa18.21■□□□□ 0.51
HMGCL-203ENST00000374490 NSD2O96028 1365 aa18.2■□□□□ 0.5
HMGCL-203ENST00000374490 PLIN1O60240 522 aa18.2■□□□□ 0.5
HMGCL-203ENST00000374490 HDGFP51858 240 aaKnown RBP18.2■□□□□ 0.5
HMGCL-203ENST00000374490 NINLQ9Y2I6 1382 aa18.19■□□□□ 0.5
HMGCL-203ENST00000374490 KCNA6P17658 529 aa18.19■□□□□ 0.5
HMGCL-203ENST00000374490 MORC1Q86VD1 984 aa18.18■□□□□ 0.5
HMGCL-203ENST00000374490 TMEM94Q12767 1356 aa18.17■□□□□ 0.5
HMGCL-203ENST00000374490 EVC2Q86UK5 1308 aa18.17■□□□□ 0.5
HMGCL-203ENST00000374490 APAF1O14727 1248 aa18.17■□□□□ 0.5
HMGCL-203ENST00000374490 CENPQQ7L2Z9 268 aaPredicted RBP18.17■□□□□ 0.5
HMGCL-203ENST00000374490 SLC26A8Q96RN1 970 aa18.17■□□□□ 0.5
HMGCL-203ENST00000374490 PDE4AP27815 886 aa18.16■□□□□ 0.5
HMGCL-203ENST00000374490 CGNL1Q0VF96 1302 aa18.16■□□□□ 0.5
HMGCL-203ENST00000374490 NCBP3Q53F19 620 aaKnown RBP18.16■□□□□ 0.5
HMGCL-203ENST00000374490 PROSER2Q86WR7 435 aaPredicted RBP18.16■□□□□ 0.5
HMGCL-203ENST00000374490 CCDC146Q8IYE0 955 aa18.16■□□□□ 0.5
HMGCL-203ENST00000374490 BACH2Q9BYV9 841 aa18.16■□□□□ 0.5
HMGCL-203ENST00000374490 ZBTB47Q9UFB7 747 aaPredicted RBP18.15■□□□□ 0.5
HMGCL-203ENST00000374490 FAM135BQ49AJ0 1406 aa18.15■□□□□ 0.5
HMGCL-203ENST00000374490 YTHDC2Q9H6S0 1430 aaKnown RBP18.15■□□□□ 0.5
HMGCL-203ENST00000374490 SETD1AO15047 1707 aaKnown RBP18.15■□□□□ 0.5
HMGCL-203ENST00000374490 ANKRD36BQ8N2N9 1353 aa18.15■□□□□ 0.5
HMGCL-203ENST00000374490 KDM2BQ8NHM5 1336 aa18.14■□□□□ 0.49
HMGCL-203ENST00000374490 CFAP53Q96M91 514 aa18.14■□□□□ 0.49
HMGCL-203ENST00000374490 SHPRHQ149N8 1683 aa18.13■□□□□ 0.49
HMGCL-203ENST00000374490 STK26Q9P289 416 aa18.12■□□□□ 0.49
HMGCL-203ENST00000374490 NRXN3Q9Y4C0 1643 aa18.12■□□□□ 0.49
HMGCL-203ENST00000374490 TULP4Q9NRJ4 1543 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms