RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 METP08581 1390 aa13.41□□□□□ -0.26
PTPN20-202ENST00000374339 POLR3GLQ9BT43 218 aa13.41□□□□□ -0.26
PTPN20-202ENST00000374339 FAM135BQ49AJ0 1406 aa13.4□□□□□ -0.26
PTPN20-202ENST00000374339 SIRT1Q96EB6 747 aa13.4□□□□□ -0.26
PTPN20-202ENST00000374339 POGKQ9P215 609 aa13.4□□□□□ -0.26
PTPN20-202ENST00000374339 U3KPZ7 1027 aaPredicted RBP13.4□□□□□ -0.26
PTPN20-202ENST00000374339 PIK3R4Q99570 1358 aa13.4□□□□□ -0.26
PTPN20-202ENST00000374339 EVC2Q86UK5 1308 aa13.38□□□□□ -0.27
PTPN20-202ENST00000374339 PUS7Q96PZ0 661 aaKnown RBP13.38□□□□□ -0.27
PTPN20-202ENST00000374339 PRAM1Q96QH2 718 aa13.38□□□□□ -0.27
PTPN20-202ENST00000374339 NPHP4O75161 1426 aaPredicted RBP13.37□□□□□ -0.27
PTPN20-202ENST00000374339 SLC26A8Q96RN1 970 aa13.37□□□□□ -0.27
PTPN20-202ENST00000374339 XRN1Q8IZH2 1706 aaKnown RBP13.36□□□□□ -0.27
PTPN20-202ENST00000374339 ANP32CO43423 234 aa13.36□□□□□ -0.27
PTPN20-202ENST00000374339 MYOM1P52179 1685 aa13.36□□□□□ -0.27
PTPN20-202ENST00000374339 TULP4Q9NRJ4 1543 aa13.35□□□□□ -0.27
PTPN20-202ENST00000374339 PTCH1Q13635 1447 aa13.35□□□□□ -0.27
PTPN20-202ENST00000374339 CHD2O14647 1828 aaKnown RBP13.35□□□□□ -0.27
PTPN20-202ENST00000374339 MIER1Q8N108 512 aa13.34□□□□□ -0.27
PTPN20-202ENST00000374339 LMTK3Q96Q04 1460 aa13.34□□□□□ -0.27
PTPN20-202ENST00000374339 SAFB2Q14151 953 aaKnown RBP eCLIP13.33□□□□□ -0.27
PTPN20-202ENST00000374339 AMOTL2Q9Y2J4 779 aa13.32□□□□□ -0.28
PTPN20-202ENST00000374339 PTPRUQ92729 1446 aa13.32□□□□□ -0.28
PTPN20-202ENST00000374339 ADGRB2O60241 1585 aa13.32□□□□□ -0.28
PTPN20-202ENST00000374339 ROBO2Q9HCK4 1378 aa13.32□□□□□ -0.28
PTPN20-202ENST00000374339 NINLQ9Y2I6 1382 aa13.32□□□□□ -0.28
PTPN20-202ENST00000374339 MINK1Q8N4C8 1332 aaPredicted RBP13.31□□□□□ -0.28
PTPN20-202ENST00000374339 ATAD2Q6PL18 1390 aa13.31□□□□□ -0.28
PTPN20-202ENST00000374339 WAPLQ7Z5K2 1190 aa13.31□□□□□ -0.28
PTPN20-202ENST00000374339 NCKAP5LQ9HCH0 1330 aa13.3□□□□□ -0.28
PTPN20-202ENST00000374339 PLEKHH1Q9ULM0 1364 aa13.3□□□□□ -0.28
PTPN20-202ENST00000374339 SRPK2P78362 688 aaKnown RBP13.3□□□□□ -0.28
PTPN20-202ENST00000374339 NWD1Q149M9 1564 aa13.29□□□□□ -0.28
PTPN20-202ENST00000374339 KTN1Q86UP2 1357 aaKnown RBP13.29□□□□□ -0.28
PTPN20-202ENST00000374339 PANK3Q9H999 370 aa13.28□□□□□ -0.28
PTPN20-202ENST00000374339 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.28□□□□□ -0.28
PTPN20-202ENST00000374339 WASLO00401 505 aaPredicted RBP13.27□□□□□ -0.29
PTPN20-202ENST00000374339 CAPN15O75808 1086 aa13.27□□□□□ -0.29
PTPN20-202ENST00000374339 CDK19Q9BWU1 502 aa13.27□□□□□ -0.29
PTPN20-202ENST00000374339 STRCQ7RTU9 1775 aa13.26□□□□□ -0.29
PTPN20-202ENST00000374339 CCER2I3L3R5 266 aa13.26□□□□□ -0.29
PTPN20-202ENST00000374339 PER1O15534 1290 aaPredicted RBP13.26□□□□□ -0.29
PTPN20-202ENST00000374339 KCNA6P17658 529 aa13.26□□□□□ -0.29
PTPN20-202ENST00000374339 CABP2Q9NPB3 220 aa13.26□□□□□ -0.29
PTPN20-202ENST00000374339 SPINK5Q9NQ38 1064 aaPredicted RBP13.26□□□□□ -0.29
PTPN20-202ENST00000374339 KNSTRNQ9Y448 316 aa13.26□□□□□ -0.29
PTPN20-202ENST00000374339 NKTRP30414 1462 aaKnown RBP13.26□□□□□ -0.29
PTPN20-202ENST00000374339 HSPA2P54652 639 aa13.25□□□□□ -0.29
PTPN20-202ENST00000374339 TMC1Q8TDI8 760 aa13.25□□□□□ -0.29
PTPN20-202ENST00000374339 PRKRIP1Q9H875 184 aaPredicted RBP13.25□□□□□ -0.29
PTPN20-202ENST00000374339 ANKRD36BQ8N2N9 1353 aa13.24□□□□□ -0.29
PTPN20-202ENST00000374339 USP32Q8NFA0 1604 aa13.24□□□□□ -0.29
PTPN20-202ENST00000374339 ITSN1Q15811 1721 aa13.23□□□□□ -0.29
PTPN20-202ENST00000374339 NPC1L1Q9UHC9 1359 aa13.23□□□□□ -0.29
PTPN20-202ENST00000374339 DSG3P32926 999 aa13.23□□□□□ -0.29
PTPN20-202ENST00000374339 RALBP1Q15311 655 aa13.23□□□□□ -0.29
PTPN20-202ENST00000374339 TERF2IPQ9NYB0 399 aa13.23□□□□□ -0.29
PTPN20-202ENST00000374339 ATP7BP35670 1465 aa13.23□□□□□ -0.29
PTPN20-202ENST00000374339 NALCNQ8IZF0 1738 aa13.22□□□□□ -0.29
PTPN20-202ENST00000374339 CDC42BPGQ6DT37 1551 aa13.22□□□□□ -0.29
PTPN20-202ENST00000374339 SLC12A5Q9H2X9 1139 aa13.21□□□□□ -0.29
PTPN20-202ENST00000374339 TOPAZ1Q8N9V7 1692 aa13.21□□□□□ -0.29
PTPN20-202ENST00000374339 HDGFL2Q7Z4V5 671 aaPredicted RBP13.2□□□□□ -0.3
PTPN20-202ENST00000374339 CCDC61Q9Y6R9 512 aa13.2□□□□□ -0.3
PTPN20-202ENST00000374339 FMN2Q9NZ56 1722 aa13.2□□□□□ -0.3
PTPN20-202ENST00000374339 PPIP5K1Q6PFW1 1433 aa13.2□□□□□ -0.3
PTPN20-202ENST00000374339 ADGRL3Q9HAR2 1447 aa13.2□□□□□ -0.3
PTPN20-202ENST00000374339 SLC4A2P04920 1241 aa13.2□□□□□ -0.3
PTPN20-202ENST00000374339 NUDT16Q96DE0 195 aaKnown RBP13.2□□□□□ -0.3
PTPN20-202ENST00000374339 ANKARQ7Z5J8 1434 aa13.19□□□□□ -0.3
PTPN20-202ENST00000374339 NSD3Q9BZ95 1437 aa13.19□□□□□ -0.3
PTPN20-202ENST00000374339 PARD3Q8TEW0 1356 aa13.19□□□□□ -0.3
PTPN20-202ENST00000374339 NCOA3Q9Y6Q9 1424 aa13.18□□□□□ -0.3
PTPN20-202ENST00000374339 A0A1W2PP64 1363 aa13.18□□□□□ -0.3
PTPN20-202ENST00000374339 CGNL1Q0VF96 1302 aa13.18□□□□□ -0.3
PTPN20-202ENST00000374339 MYBBP1AQ9BQG0 1328 aaKnown RBP13.18□□□□□ -0.3
PTPN20-202ENST00000374339 AMER1Q5JTC6 1135 aaPredicted RBP13.18□□□□□ -0.3
PTPN20-202ENST00000374339 CARD14Q9BXL6 1004 aa13.18□□□□□ -0.3
PTPN20-202ENST00000374339 CABP1Q9NZU7 370 aa13.18□□□□□ -0.3
PTPN20-202ENST00000374339 AKAP12Q02952 1782 aa13.17□□□□□ -0.3
PTPN20-202ENST00000374339 NSD2O96028 1365 aa13.17□□□□□ -0.3
PTPN20-202ENST00000374339 CD163L1Q9NR16 1453 aa13.17□□□□□ -0.3
PTPN20-202ENST00000374339 STRCP1A6NGW2 1772 aa13.17□□□□□ -0.3
PTPN20-202ENST00000374339 PROSER2Q86WR7 435 aaPredicted RBP13.17□□□□□ -0.3
PTPN20-202ENST00000374339 MON2Q7Z3U7 1717 aa13.16□□□□□ -0.3
PTPN20-202ENST00000374339 CPSF1Q10570 1443 aaKnown RBP13.16□□□□□ -0.3
PTPN20-202ENST00000374339 CC2D1BQ5T0F9 858 aaKnown RBP13.16□□□□□ -0.3
PTPN20-202ENST00000374339 C14orf37Q86TY3 774 aa13.16□□□□□ -0.3
PTPN20-202ENST00000374339 KIF20BQ96Q89 1820 aa13.15□□□□□ -0.3
PTPN20-202ENST00000374339 CNGB1Q14028 1251 aaPredicted RBP13.15□□□□□ -0.3
PTPN20-202ENST00000374339 ZNF692Q9BU19 519 aaPredicted RBP13.15□□□□□ -0.3
PTPN20-202ENST00000374339 ANKRD26Q9UPS8 1709 aa13.15□□□□□ -0.31
PTPN20-202ENST00000374339 PRR36Q9H6K5 1346 aa13.14□□□□□ -0.31
PTPN20-202ENST00000374339 EDC4Q6P2E9 1401 aaKnown RBP13.14□□□□□ -0.31
PTPN20-202ENST00000374339 RGPD8O14715 1765 aaPredicted RBP13.14□□□□□ -0.31
PTPN20-202ENST00000374339 PLEKHG3A1L390 1219 aa13.14□□□□□ -0.31
PTPN20-202ENST00000374339 POTEHQ6S545 545 aa13.14□□□□□ -0.31
PTPN20-202ENST00000374339 BRD4O60885 1362 aaPredicted RBP13.14□□□□□ -0.31
PTPN20-202ENST00000374339 DCCP43146 1447 aa13.13□□□□□ -0.31
PTPN20-202ENST00000374339 NLRP13Q86W25 1043 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms