RNA–Protein interactions for RNA: ENST00000373381.8

CSMD2-205, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSMD2, Length 13,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-205ENST00000373381 POTEJP0CG39 1038 aa10.9□□□□□ -0.67
CSMD2-205ENST00000373381 RBM5P52756 815 aaKnown RBP eCLIP10.89□□□□□ -0.67
CSMD2-205ENST00000373381 ZNHIT6Q9NWK9 470 aaKnown RBP10.89□□□□□ -0.67
CSMD2-205ENST00000373381 PPM1EQ8WY54 764 aa10.89□□□□□ -0.67
CSMD2-205ENST00000373381 STIM1Q13586 685 aa10.89□□□□□ -0.67
CSMD2-205ENST00000373381 NINLQ9Y2I6 1382 aa10.89□□□□□ -0.67
CSMD2-205ENST00000373381 RB1CC1Q8TDY2 1594 aa10.89□□□□□ -0.67
CSMD2-205ENST00000373381 PABPN1LA6NDY0 278 aaKnown RBP10.89□□□□□ -0.67
CSMD2-205ENST00000373381 BAZ1BQ9UIG0 1483 aaKnown RBP10.89□□□□□ -0.67
CSMD2-205ENST00000373381 ANKRD45Q5TZF3 282 aa10.89□□□□□ -0.67
CSMD2-205ENST00000373381 PLCD4Q9BRC7 762 aa10.89□□□□□ -0.67
CSMD2-205ENST00000373381 DDX49Q9Y6V7 483 aaKnown RBP10.89□□□□□ -0.67
CSMD2-205ENST00000373381 WASHC4Q2M389 1173 aa10.89□□□□□ -0.67
CSMD2-205ENST00000373381 FILIP1LQ4L180 1135 aa10.88□□□□□ -0.67
CSMD2-205ENST00000373381 EPB41L2O43491 1005 aaKnown RBP10.88□□□□□ -0.67
CSMD2-205ENST00000373381 ZNF710Q8N1W2 664 aa10.88□□□□□ -0.67
CSMD2-205ENST00000373381 CCDC91Q7Z6B0 441 aa10.88□□□□□ -0.67
CSMD2-205ENST00000373381 GON4LQ3T8J9 2241 aa10.88□□□□□ -0.67
CSMD2-205ENST00000373381 PPP4R3AQ6IN85 833 aa10.88□□□□□ -0.67
CSMD2-205ENST00000373381 TSPYL1Q9H0U9 437 aa10.87□□□□□ -0.67
CSMD2-205ENST00000373381 CLUAP1Q96AJ1 413 aa10.87□□□□□ -0.67
CSMD2-205ENST00000373381 CCDC181Q5TID7 509 aa10.87□□□□□ -0.67
CSMD2-205ENST00000373381 PKD2Q13563 968 aa10.87□□□□□ -0.67
CSMD2-205ENST00000373381 PDILTQ8N807 584 aa10.87□□□□□ -0.67
CSMD2-205ENST00000373381 NUTM2DQ5VT03 806 aaPredicted RBP10.87□□□□□ -0.67
CSMD2-205ENST00000373381 ANKRD30AQ9BXX3 1397 aa10.86□□□□□ -0.67
CSMD2-205ENST00000373381 RIC3Q7Z5B4 369 aa10.86□□□□□ -0.67
CSMD2-205ENST00000373381 IFT57Q9NWB7 429 aa10.86□□□□□ -0.67
CSMD2-205ENST00000373381 SCLT1Q96NL6 688 aa10.86□□□□□ -0.67
CSMD2-205ENST00000373381 TMOD2Q9NZR1 351 aa10.86□□□□□ -0.67
CSMD2-205ENST00000373381 IBSPP21815 317 aaPredicted RBP10.85□□□□□ -0.67
CSMD2-205ENST00000373381 NEUROD6Q96NK8 337 aa10.85□□□□□ -0.67
CSMD2-205ENST00000373381 DEF6Q9H4E7 631 aa10.85□□□□□ -0.67
CSMD2-205ENST00000373381 NF2P35240 595 aa10.85□□□□□ -0.67
CSMD2-205ENST00000373381 VPS37CA5D8V6 355 aaPredicted RBP10.85□□□□□ -0.67
CSMD2-205ENST00000373381 KIF7Q2M1P5 1343 aa10.85□□□□□ -0.67
CSMD2-205ENST00000373381 TNIP1Q15025 636 aa10.85□□□□□ -0.67
CSMD2-205ENST00000373381 SMC3Q9UQE7 1217 aa10.85□□□□□ -0.67
CSMD2-205ENST00000373381 PSMA5P28066 241 aa10.85□□□□□ -0.67
CSMD2-205ENST00000373381 FOSBP53539 338 aa10.85□□□□□ -0.67
CSMD2-205ENST00000373381 DDX23Q9BUQ8 820 aaKnown RBP10.84□□□□□ -0.67
CSMD2-205ENST00000373381 COMMD10Q9Y6G5 202 aa10.84□□□□□ -0.67
CSMD2-205ENST00000373381 EVC2Q86UK5 1308 aa10.84□□□□□ -0.67
CSMD2-205ENST00000373381 SKIDA1Q1XH10 827 aa10.84□□□□□ -0.67
CSMD2-205ENST00000373381 CETN2P41208 172 aa10.84□□□□□ -0.67
CSMD2-205ENST00000373381 PLIN1O60240 522 aa10.84□□□□□ -0.67
CSMD2-205ENST00000373381 CT47B1P0C2W7 299 aaPredicted RBP10.84□□□□□ -0.67
CSMD2-205ENST00000373381 CCDC150Q8NCX0 1101 aa10.84□□□□□ -0.67
CSMD2-205ENST00000373381 DYDC1Q8WWB3 177 aa10.84□□□□□ -0.67
CSMD2-205ENST00000373381 ARHGAP35Q9NRY4 1499 aa10.83□□□□□ -0.68
CSMD2-205ENST00000373381 KIAA0754O94854 1291 aa10.83□□□□□ -0.68
CSMD2-205ENST00000373381 NOP2P46087 812 aaKnown RBP10.83□□□□□ -0.68
CSMD2-205ENST00000373381 CCDC146Q8IYE0 955 aa10.83□□□□□ -0.68
CSMD2-205ENST00000373381 SSX2IPQ9Y2D8 614 aa10.83□□□□□ -0.68
CSMD2-205ENST00000373381 BMP2KQ9NSY1 1161 aaPredicted RBP10.83□□□□□ -0.68
CSMD2-205ENST00000373381 AXDND1Q5T1B0 1012 aaPredicted RBP10.83□□□□□ -0.68
CSMD2-205ENST00000373381 WRNQ14191 1432 aaPredicted RBP eCLIP10.83□□□□□ -0.68
CSMD2-205ENST00000373381 PPP1R12BO60237 982 aaPredicted RBP10.83□□□□□ -0.68
CSMD2-205ENST00000373381 ZHX3Q9H4I2 956 aa10.83□□□□□ -0.68
CSMD2-205ENST00000373381 TTLL5Q6EMB2 1281 aa10.82□□□□□ -0.68
CSMD2-205ENST00000373381 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.82□□□□□ -0.68
CSMD2-205ENST00000373381 FKBP5Q13451 457 aaPredicted RBP10.82□□□□□ -0.68
CSMD2-205ENST00000373381 SDF4Q9BRK5 362 aa10.82□□□□□ -0.68
CSMD2-205ENST00000373381 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.82□□□□□ -0.68
CSMD2-205ENST00000373381 IQCEQ6IPM2 695 aa10.82□□□□□ -0.68
CSMD2-205ENST00000373381 NLRP2Q9NX02 1062 aa10.82□□□□□ -0.68
CSMD2-205ENST00000373381 NUP155O75694 1391 aa10.82□□□□□ -0.68
CSMD2-205ENST00000373381 TTLL12Q14166 644 aaPredicted RBP10.82□□□□□ -0.68
CSMD2-205ENST00000373381 GIGYF2Q6Y7W6 1299 aaKnown RBP10.82□□□□□ -0.68
CSMD2-205ENST00000373381 LEKR1Q6ZMV7 388 aa10.81□□□□□ -0.68
CSMD2-205ENST00000373381 CEP164Q9UPV0 1460 aa10.81□□□□□ -0.68
CSMD2-205ENST00000373381 DHX8Q14562 1220 aaKnown RBP10.81□□□□□ -0.68
CSMD2-205ENST00000373381 CEP63Q96MT8 703 aa10.81□□□□□ -0.68
CSMD2-205ENST00000373381 SLC26A8Q96RN1 970 aa10.81□□□□□ -0.68
CSMD2-205ENST00000373381 MYCNP04198 464 aaPredicted RBP10.81□□□□□ -0.68
CSMD2-205ENST00000373381 SSR1P43307 286 aaKnown RBP10.81□□□□□ -0.68
CSMD2-205ENST00000373381 IPO9Q96P70 1041 aaKnown RBP10.81□□□□□ -0.68
CSMD2-205ENST00000373381 ZNF76P36508 570 aa10.81□□□□□ -0.68
CSMD2-205ENST00000373381 TANGO6Q9C0B7 1094 aa10.81□□□□□ -0.68
CSMD2-205ENST00000373381 ZKSCAN2Q63HK3 967 aa10.81□□□□□ -0.68
CSMD2-205ENST00000373381 JAKMIP3Q5VZ66 844 aa10.81□□□□□ -0.68
CSMD2-205ENST00000373381 VGFO15240 615 aaPredicted RBP10.8□□□□□ -0.68
CSMD2-205ENST00000373381 PDE3BQ13370 1112 aa10.8□□□□□ -0.68
CSMD2-205ENST00000373381 JMYQ8N9B5 988 aa10.8□□□□□ -0.68
CSMD2-205ENST00000373381 FERMT1Q9BQL6 677 aa10.8□□□□□ -0.68
CSMD2-205ENST00000373381 SOGA3Q5TF21 947 aa10.8□□□□□ -0.68
CSMD2-205ENST00000373381 NACAP1Q9BZK3 213 aa10.8□□□□□ -0.68
CSMD2-205ENST00000373381 HSP90AB3PQ58FF7 597 aa10.8□□□□□ -0.68
CSMD2-205ENST00000373381 NECTIN2Q92692 538 aa10.8□□□□□ -0.68
CSMD2-205ENST00000373381 HIP1O00291 1037 aa10.8□□□□□ -0.68
CSMD2-205ENST00000373381 MRPS9P82933 396 aaKnown RBP10.8□□□□□ -0.68
CSMD2-205ENST00000373381 KINO60870 393 aaKnown RBP10.8□□□□□ -0.68
CSMD2-205ENST00000373381 INTS3Q68E01 1043 aaKnown RBP10.8□□□□□ -0.68
CSMD2-205ENST00000373381 LRSAM1Q6UWE0 723 aa10.8□□□□□ -0.68
CSMD2-205ENST00000373381 TAX1BP1Q86VP1 789 aa10.8□□□□□ -0.68
CSMD2-205ENST00000373381 TIMELESSQ9UNS1 1208 aa10.8□□□□□ -0.68
CSMD2-205ENST00000373381 CNTROBQ8N137 903 aa10.79□□□□□ -0.68
CSMD2-205ENST00000373381 SPATA24Q86W54 205 aa10.79□□□□□ -0.68
CSMD2-205ENST00000373381 EIF3JO75822 258 aaKnown RBP10.79□□□□□ -0.68
CSMD2-205ENST00000373381 ANKRD18BA2A2Z9 1011 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms