RNA–Protein interactions for RNA: ENST00000373377.1

CSMD2-203, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-203ENST00000373377 NEO1Q92859 1461 aa12.54□□□□□ -0.4
CSMD2-203ENST00000373377 UPF2Q9HAU5 1272 aaKnown RBP12.54□□□□□ -0.4
CSMD2-203ENST00000373377 OSCARQ8IYS5 282 aa12.54□□□□□ -0.4
CSMD2-203ENST00000373377 UGGT1Q9NYU2 1555 aa12.54□□□□□ -0.4
CSMD2-203ENST00000373377 RIMBP3CA6NJZ7 1639 aa12.53□□□□□ -0.4
CSMD2-203ENST00000373377 RIMBP3BA6NNM3 1639 aa12.53□□□□□ -0.4
CSMD2-203ENST00000373377 RIMBP3Q9UFD9 1639 aa12.53□□□□□ -0.4
CSMD2-203ENST00000373377 E9PSI1 815 aa12.52□□□□□ -0.41
CSMD2-203ENST00000373377 CD109Q6YHK3 1445 aa12.51□□□□□ -0.41
CSMD2-203ENST00000373377 CDCA8Q53HL2 280 aa12.5□□□□□ -0.41
CSMD2-203ENST00000373377 ABCC3O15438 1527 aa12.5□□□□□ -0.41
CSMD2-203ENST00000373377 MFAP1P55081 439 aaKnown RBP12.5□□□□□ -0.41
CSMD2-203ENST00000373377 CFAP70Q5T0N1 1121 aa12.5□□□□□ -0.41
CSMD2-203ENST00000373377 DIP2BQ9P265 1576 aa12.49□□□□□ -0.41
CSMD2-203ENST00000373377 ZNF521Q96K83 1311 aa12.49□□□□□ -0.41
CSMD2-203ENST00000373377 SYNMO15061 1565 aa12.49□□□□□ -0.41
CSMD2-203ENST00000373377 USP19O94966 1318 aa12.49□□□□□ -0.41
CSMD2-203ENST00000373377 SETBP1Q9Y6X0 1596 aa12.48□□□□□ -0.41
CSMD2-203ENST00000373377 RLBP1P12271 317 aa12.48□□□□□ -0.41
CSMD2-203ENST00000373377 PCDHB15Q9Y5E8 787 aa12.48□□□□□ -0.41
CSMD2-203ENST00000373377 CGNL1Q0VF96 1302 aa12.48□□□□□ -0.41
CSMD2-203ENST00000373377 NAP1L5Q96NT1 182 aaPredicted RBP12.48□□□□□ -0.41
CSMD2-203ENST00000373377 PDZRN3Q9UPQ7 1066 aa12.48□□□□□ -0.41
CSMD2-203ENST00000373377 NKTRP30414 1462 aaKnown RBP12.47□□□□□ -0.41
CSMD2-203ENST00000373377 WWC1Q8IX03 1113 aa12.47□□□□□ -0.41
CSMD2-203ENST00000373377 MORC1Q86VD1 984 aa12.47□□□□□ -0.41
CSMD2-203ENST00000373377 RRAGDQ9NQL2 400 aaPredicted RBP12.47□□□□□ -0.41
CSMD2-203ENST00000373377 TBC1D2Q9BYX2 928 aa12.46□□□□□ -0.41
CSMD2-203ENST00000373377 PANK2Q9BZ23 570 aa12.46□□□□□ -0.41
CSMD2-203ENST00000373377 FTSJ3Q8IY81 847 aaKnown RBP12.46□□□□□ -0.42
CSMD2-203ENST00000373377 FAM43AQ8N2R8 423 aa12.46□□□□□ -0.42
CSMD2-203ENST00000373377 MAPK8IP3Q9UPT6 1336 aa12.46□□□□□ -0.42
CSMD2-203ENST00000373377 CARD14Q9BXL6 1004 aa12.45□□□□□ -0.42
CSMD2-203ENST00000373377 REREQ9P2R6 1566 aa12.45□□□□□ -0.42
CSMD2-203ENST00000373377 FOXD4L1Q9NU39 408 aa12.45□□□□□ -0.42
CSMD2-203ENST00000373377 NPATQ14207 1427 aa12.45□□□□□ -0.42
CSMD2-203ENST00000373377 KDM5AP29375 1690 aaKnown RBP12.45□□□□□ -0.42
CSMD2-203ENST00000373377 SAFB2Q14151 953 aaKnown RBP eCLIP12.45□□□□□ -0.42
CSMD2-203ENST00000373377 TCP11L2Q8N4U5 519 aa12.45□□□□□ -0.42
CSMD2-203ENST00000373377 TRAK1Q9UPV9 953 aa12.45□□□□□ -0.42
CSMD2-203ENST00000373377 NUTM2DQ5VT03 806 aaPredicted RBP12.44□□□□□ -0.42
CSMD2-203ENST00000373377 SCAF11Q99590 1463 aaKnown RBP12.44□□□□□ -0.42
CSMD2-203ENST00000373377 EIF3AQ14152 1382 aaKnown RBP12.43□□□□□ -0.42
CSMD2-203ENST00000373377 ADGRB1O14514 1584 aa12.43□□□□□ -0.42
CSMD2-203ENST00000373377 KANK1Q14678 1352 aa12.43□□□□□ -0.42
CSMD2-203ENST00000373377 GOLGA6L3A6NEY3 463 aa12.43□□□□□ -0.42
CSMD2-203ENST00000373377 PDE3AQ14432 1141 aa12.43□□□□□ -0.42
CSMD2-203ENST00000373377 RSPH6AQ9H0K4 717 aa12.43□□□□□ -0.42
CSMD2-203ENST00000373377 SLC12A5Q9H2X9 1139 aa12.43□□□□□ -0.42
CSMD2-203ENST00000373377 TSR2Q969E8 191 aaKnown RBP12.43□□□□□ -0.42
CSMD2-203ENST00000373377 PREX1Q8TCU6 1659 aa12.43□□□□□ -0.42
CSMD2-203ENST00000373377 MYO5BQ9ULV0 1848 aa12.42□□□□□ -0.42
CSMD2-203ENST00000373377 NOS1P29475 1434 aa12.42□□□□□ -0.42
CSMD2-203ENST00000373377 U2AF1L5P0DN76 240 aaPredicted RBP12.42□□□□□ -0.42
CSMD2-203ENST00000373377 RARSP54136 660 aaKnown RBP12.42□□□□□ -0.42
CSMD2-203ENST00000373377 U2AF1Q01081 240 aaKnown RBP eCLIP12.42□□□□□ -0.42
CSMD2-203ENST00000373377 KIF13AQ9H1H9 1805 aa12.42□□□□□ -0.42
CSMD2-203ENST00000373377 L1TD1Q5T7N2 865 aaKnown RBP12.42□□□□□ -0.42
CSMD2-203ENST00000373377 TRMT2AQ8IZ69 625 aaKnown RBP12.42□□□□□ -0.42
CSMD2-203ENST00000373377 PMFBP1Q8TBY8 1022 aa12.42□□□□□ -0.42
CSMD2-203ENST00000373377 NEXMIFQ5QGS0 1516 aa12.41□□□□□ -0.42
CSMD2-203ENST00000373377 U2SURPO15042 1029 aaKnown RBP12.41□□□□□ -0.42
CSMD2-203ENST00000373377 KIF3BO15066 747 aa12.41□□□□□ -0.42
CSMD2-203ENST00000373377 ITPRIPQ8IWB1 547 aa12.41□□□□□ -0.42
CSMD2-203ENST00000373377 STAC3Q96MF2 364 aa12.41□□□□□ -0.42
CSMD2-203ENST00000373377 RWDD1Q9H446 243 aaPredicted RBP12.41□□□□□ -0.42
CSMD2-203ENST00000373377 MTHFSP49914 203 aa12.4□□□□□ -0.42
CSMD2-203ENST00000373377 ARHGAP31Q2M1Z3 1444 aa12.4□□□□□ -0.42
CSMD2-203ENST00000373377 QRICH2Q9H0J4 1663 aa12.4□□□□□ -0.42
CSMD2-203ENST00000373377 ARHGEF28Q8N1W1 1705 aaKnown RBP12.4□□□□□ -0.42
CSMD2-203ENST00000373377 XRCC6P12956 609 aaKnown RBP eCLIP12.4□□□□□ -0.42
CSMD2-203ENST00000373377 TMEM132EQ6IEE7 984 aa12.4□□□□□ -0.42
CSMD2-203ENST00000373377 PIK3C2GO75747 1445 aa12.39□□□□□ -0.43
CSMD2-203ENST00000373377 HSP90AA1P07900 732 aaKnown RBP12.39□□□□□ -0.43
CSMD2-203ENST00000373377 ASXL1Q8IXJ9 1541 aa12.39□□□□□ -0.43
CSMD2-203ENST00000373377 TBC1D32Q96NH3 1257 aa12.39□□□□□ -0.43
CSMD2-203ENST00000373377 C22orf23Q9BZE7 217 aa12.39□□□□□ -0.43
CSMD2-203ENST00000373377 ADGRF5Q8IZF2 1346 aa12.39□□□□□ -0.43
CSMD2-203ENST00000373377 SMC4Q9NTJ3 1288 aa12.39□□□□□ -0.43
CSMD2-203ENST00000373377 PNNQ9H307 717 aaKnown RBP12.38□□□□□ -0.43
CSMD2-203ENST00000373377 UBE2Q2Q8WVN8 375 aa12.38□□□□□ -0.43
CSMD2-203ENST00000373377 TMEM131LA2VDJ0 1609 aa12.38□□□□□ -0.43
CSMD2-203ENST00000373377 MCM4P33991 863 aa12.37□□□□□ -0.43
CSMD2-203ENST00000373377 RUNDC1Q96C34 613 aa12.37□□□□□ -0.43
CSMD2-203ENST00000373377 ERVK-7P63135 1459 aa12.37□□□□□ -0.43
CSMD2-203ENST00000373377 TRAK2O60296 914 aa12.37□□□□□ -0.43
CSMD2-203ENST00000373377 ANTXR1Q9H6X2 564 aa12.37□□□□□ -0.43
CSMD2-203ENST00000373377 CFAP65Q6ZU64 1925 aaKnown RBP12.37□□□□□ -0.43
CSMD2-203ENST00000373377 INSRP06213 1382 aa12.37□□□□□ -0.43
CSMD2-203ENST00000373377 HSCBQ8IWL3 235 aa12.36□□□□□ -0.43
CSMD2-203ENST00000373377 USP32Q8NFA0 1604 aa12.36□□□□□ -0.43
CSMD2-203ENST00000373377 YEATS2Q9ULM3 1422 aa12.36□□□□□ -0.43
CSMD2-203ENST00000373377 DZIP1LQ8IYY4 767 aaKnown RBP12.35□□□□□ -0.43
CSMD2-203ENST00000373377 LNPKQ9C0E8 428 aa12.35□□□□□ -0.43
CSMD2-203ENST00000373377 SETD1AO15047 1707 aaKnown RBP12.35□□□□□ -0.43
CSMD2-203ENST00000373377 ZKSCAN2Q63HK3 967 aa12.34□□□□□ -0.43
CSMD2-203ENST00000373377 CFAP53Q96M91 514 aa12.34□□□□□ -0.43
CSMD2-203ENST00000373377 AGLP35573 1532 aa12.34□□□□□ -0.43
CSMD2-203ENST00000373377 SBNO2Q9Y2G9 1366 aa12.34□□□□□ -0.43
CSMD2-203ENST00000373377 EXOSC9Q06265 439 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms