RNA–Protein interactions for RNA: ENST00000372873.8

SYNPO2L-201, Transcript of synaptopodin 2 like, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2L, Length 4,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2L-201ENST00000372873 TIGD1Q96MW7 591 aa13.69□□□□□ -0.22
SYNPO2L-201ENST00000372873 MRC2Q9UBG0 1479 aa13.69□□□□□ -0.22
SYNPO2L-201ENST00000372873 NPHP1O15259 732 aa13.69□□□□□ -0.22
SYNPO2L-201ENST00000372873 MORC1Q86VD1 984 aa13.69□□□□□ -0.22
SYNPO2L-201ENST00000372873 SPC24Q8NBT2 197 aa13.69□□□□□ -0.22
SYNPO2L-201ENST00000372873 DNAJC2Q99543 621 aaKnown RBP13.68□□□□□ -0.22
SYNPO2L-201ENST00000372873 CALCOCO1Q9P1Z2 691 aa13.68□□□□□ -0.22
SYNPO2L-201ENST00000372873 U2AF1L5P0DN76 240 aaPredicted RBP13.68□□□□□ -0.22
SYNPO2L-201ENST00000372873 U2AF1Q01081 240 aaKnown RBP eCLIP13.68□□□□□ -0.22
SYNPO2L-201ENST00000372873 GPS2Q13227 327 aa13.68□□□□□ -0.22
SYNPO2L-201ENST00000372873 DDX19BQ9UMR2 479 aa13.68□□□□□ -0.22
SYNPO2L-201ENST00000372873 SNAPC4Q5SXM2 1469 aa13.67□□□□□ -0.22
SYNPO2L-201ENST00000372873 BAG4O95429 457 aaKnown RBP13.67□□□□□ -0.22
SYNPO2L-201ENST00000372873 RIPK4P57078 832 aa13.67□□□□□ -0.22
SYNPO2L-201ENST00000372873 SLFN5Q08AF3 891 aa13.67□□□□□ -0.22
SYNPO2L-201ENST00000372873 TSC1Q92574 1164 aa13.67□□□□□ -0.22
SYNPO2L-201ENST00000372873 UTP14CQ5TAP6 766 aaKnown RBP13.67□□□□□ -0.22
SYNPO2L-201ENST00000372873 ZNF608Q9ULD9 1512 aaPredicted RBP13.67□□□□□ -0.22
SYNPO2L-201ENST00000372873 PTPRGP23470 1445 aa13.67□□□□□ -0.22
SYNPO2L-201ENST00000372873 ZSCAN23Q3MJ62 389 aa13.67□□□□□ -0.22
SYNPO2L-201ENST00000372873 IPO4Q8TEX9 1081 aaKnown RBP13.66□□□□□ -0.22
SYNPO2L-201ENST00000372873 ZNF830Q96NB3 372 aaPredicted RBP13.66□□□□□ -0.22
SYNPO2L-201ENST00000372873 MIA2Q96PC5 1412 aa13.66□□□□□ -0.22
SYNPO2L-201ENST00000372873 PTPN23Q9H3S7 1636 aa13.66□□□□□ -0.22
SYNPO2L-201ENST00000372873 CCDC112Q8NEF3 446 aa13.66□□□□□ -0.22
SYNPO2L-201ENST00000372873 IQGAP2Q13576 1575 aa13.65□□□□□ -0.22
SYNPO2L-201ENST00000372873 PRIM1P49642 420 aaKnown RBP13.65□□□□□ -0.22
SYNPO2L-201ENST00000372873 RBM27Q9P2N5 1060 aaKnown RBP13.65□□□□□ -0.22
SYNPO2L-201ENST00000372873 DAPK1P53355 1430 aa13.65□□□□□ -0.22
SYNPO2L-201ENST00000372873 ANKRD50Q9ULJ7 1429 aa13.65□□□□□ -0.22
SYNPO2L-201ENST00000372873 NOLC1Q14978 699 aaKnown RBP eCLIP13.65□□□□□ -0.22
SYNPO2L-201ENST00000372873 HECW1Q76N89 1606 aa13.64□□□□□ -0.23
SYNPO2L-201ENST00000372873 TPD52L1Q16890 204 aaPredicted RBP13.64□□□□□ -0.23
SYNPO2L-201ENST00000372873 PRDM4Q9UKN5 801 aa13.64□□□□□ -0.23
SYNPO2L-201ENST00000372873 ANTXR1Q9H6X2 564 aa13.63□□□□□ -0.23
SYNPO2L-201ENST00000372873 CHMP3Q9Y3E7 222 aa13.63□□□□□ -0.23
SYNPO2L-201ENST00000372873 PPP2R1AP30153 589 aa13.63□□□□□ -0.23
SYNPO2L-201ENST00000372873 TSPYL1Q9H0U9 437 aa13.63□□□□□ -0.23
SYNPO2L-201ENST00000372873 TPM3P06753 285 aa13.63□□□□□ -0.23
SYNPO2L-201ENST00000372873 USP25Q9UHP3 1055 aa13.63□□□□□ -0.23
SYNPO2L-201ENST00000372873 PPP1R9BQ96SB3 815 aa13.62□□□□□ -0.23
SYNPO2L-201ENST00000372873 NGEFQ8N5V2 710 aa13.62□□□□□ -0.23
SYNPO2L-201ENST00000372873 IFT140Q96RY7 1462 aa13.62□□□□□ -0.23
SYNPO2L-201ENST00000372873 RABEP1Q15276 862 aa13.62□□□□□ -0.23
SYNPO2L-201ENST00000372873 EFCAB2Q5VUJ9 269 aa13.62□□□□□ -0.23
SYNPO2L-201ENST00000372873 LRPPRCP42704 1394 aaKnown RBP13.61□□□□□ -0.23
SYNPO2L-201ENST00000372873 U2AF2P26368 475 aaKnown RBP eCLIP13.61□□□□□ -0.23
SYNPO2L-201ENST00000372873 MYRIPQ8NFW9 859 aa13.61□□□□□ -0.23
SYNPO2L-201ENST00000372873 PLB1Q6P1J6 1458 aa13.61□□□□□ -0.23
SYNPO2L-201ENST00000372873 TRIM6-TRIM34B2RNG4 842 aa13.61□□□□□ -0.23
SYNPO2L-201ENST00000372873 RAB3GAP1Q15042 981 aa13.61□□□□□ -0.23
SYNPO2L-201ENST00000372873 TRIM34Q9BYJ4 488 aa13.61□□□□□ -0.23
SYNPO2L-201ENST00000372873 TROQ12816 1431 aaPredicted RBP13.61□□□□□ -0.23
SYNPO2L-201ENST00000372873 NOM1Q5C9Z4 860 aaKnown RBP13.61□□□□□ -0.23
SYNPO2L-201ENST00000372873 TTC12Q9H892 705 aaPredicted RBP13.61□□□□□ -0.23
SYNPO2L-201ENST00000372873 CWC22Q9HCG8 908 aaKnown RBP13.61□□□□□ -0.23
SYNPO2L-201ENST00000372873 KIAA0586Q9BVV6 1533 aa13.6□□□□□ -0.23
SYNPO2L-201ENST00000372873 ZNF500O60304 480 aaPredicted RBP13.6□□□□□ -0.23
SYNPO2L-201ENST00000372873 RBSNQ9H1K0 784 aa13.6□□□□□ -0.23
SYNPO2L-201ENST00000372873 ABCC5O15440 1437 aa13.6□□□□□ -0.23
SYNPO2L-201ENST00000372873 CWC15Q9P013 229 aaKnown RBP13.6□□□□□ -0.23
SYNPO2L-201ENST00000372873 STAC3Q96MF2 364 aa13.6□□□□□ -0.23
SYNPO2L-201ENST00000372873 CDC45O75419 566 aa13.59□□□□□ -0.23
SYNPO2L-201ENST00000372873 THOC2Q8NI27 1593 aaKnown RBP13.59□□□□□ -0.23
SYNPO2L-201ENST00000372873 ANKRD30BQ9BXX2 1392 aa13.59□□□□□ -0.23
SYNPO2L-201ENST00000372873 REC8O95072 547 aa13.59□□□□□ -0.23
SYNPO2L-201ENST00000372873 FAM184AQ8NB25 1140 aa13.59□□□□□ -0.23
SYNPO2L-201ENST00000372873 CFAP43Q8NDM7 1665 aa13.59□□□□□ -0.23
SYNPO2L-201ENST00000372873 CCDC144AA2RUR9 1427 aa13.59□□□□□ -0.23
SYNPO2L-201ENST00000372873 DHX29Q7Z478 1369 aaKnown RBP13.59□□□□□ -0.23
SYNPO2L-201ENST00000372873 GNL2Q13823 731 aaKnown RBP13.58□□□□□ -0.23
SYNPO2L-201ENST00000372873 PCDHB15Q9Y5E8 787 aa13.58□□□□□ -0.24
SYNPO2L-201ENST00000372873 GOLGA6L19H0YKK7 550 aa13.58□□□□□ -0.24
SYNPO2L-201ENST00000372873 LRSAM1Q6UWE0 723 aa13.58□□□□□ -0.24
SYNPO2L-201ENST00000372873 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.58□□□□□ -0.24
SYNPO2L-201ENST00000372873 ARGLU1Q9NWB6 273 aaPredicted RBP13.58□□□□□ -0.24
SYNPO2L-201ENST00000372873 GTF2F1P35269 517 aaKnown RBP eCLIP13.57□□□□□ -0.24
SYNPO2L-201ENST00000372873 MVPQ14764 893 aaKnown RBP13.57□□□□□ -0.24
SYNPO2L-201ENST00000372873 TRIM5Q9C035 493 aa13.57□□□□□ -0.24
SYNPO2L-201ENST00000372873 ATP6V1DQ9Y5K8 247 aa13.57□□□□□ -0.24
SYNPO2L-201ENST00000372873 CTTNBP2Q8WZ74 1663 aa13.57□□□□□ -0.24
SYNPO2L-201ENST00000372873 KIF3BO15066 747 aa13.57□□□□□ -0.24
SYNPO2L-201ENST00000372873 RSPH4AQ5TD94 716 aa13.57□□□□□ -0.24
SYNPO2L-201ENST00000372873 SMC5Q8IY18 1101 aa13.57□□□□□ -0.24
SYNPO2L-201ENST00000372873 NEK4P51957 841 aa13.56□□□□□ -0.24
SYNPO2L-201ENST00000372873 CCAR2Q8N163 923 aaKnown RBP13.56□□□□□ -0.24
SYNPO2L-201ENST00000372873 FEZ1Q99689 392 aa13.56□□□□□ -0.24
SYNPO2L-201ENST00000372873 RBM25P49756 843 aaKnown RBP13.56□□□□□ -0.24
SYNPO2L-201ENST00000372873 HAP1P54257 671 aaPredicted RBP13.56□□□□□ -0.24
SYNPO2L-201ENST00000372873 INTS3Q68E01 1043 aaKnown RBP13.56□□□□□ -0.24
SYNPO2L-201ENST00000372873 C16orf45Q96MC5 204 aaPredicted RBP13.56□□□□□ -0.24
SYNPO2L-201ENST00000372873 STAG3Q9UJ98 1225 aa13.56□□□□□ -0.24
SYNPO2L-201ENST00000372873 NINLQ9Y2I6 1382 aa13.56□□□□□ -0.24
SYNPO2L-201ENST00000372873 ADCY5O95622 1261 aa13.56□□□□□ -0.24
SYNPO2L-201ENST00000372873 KRT222Q8N1A0 295 aa13.55□□□□□ -0.24
SYNPO2L-201ENST00000372873 OGFRQ9NZT2 677 aa13.55□□□□□ -0.24
SYNPO2L-201ENST00000372873 HOMER1Q86YM7 354 aa13.55□□□□□ -0.24
SYNPO2L-201ENST00000372873 UGGT2Q9NYU1 1516 aa13.55□□□□□ -0.24
SYNPO2L-201ENST00000372873 BECN2A8MW95 431 aa13.55□□□□□ -0.24
SYNPO2L-201ENST00000372873 GTF2E1P29083 439 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms