RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 NPC1L1Q9UHC9 1359 aa18.96■□□□□ 0.63
COL9A2-202ENST00000372748 NOS1P29475 1434 aa18.96■□□□□ 0.63
COL9A2-202ENST00000372748 SENP3Q9H4L4 574 aaPredicted RBP18.96■□□□□ 0.63
COL9A2-202ENST00000372748 TNNQ9UQP3 1299 aa18.96■□□□□ 0.63
COL9A2-202ENST00000372748 RRP7AQ9Y3A4 280 aaKnown RBP18.96■□□□□ 0.63
COL9A2-202ENST00000372748 NUTM2DQ5VT03 806 aaPredicted RBP18.95■□□□□ 0.62
COL9A2-202ENST00000372748 BCL2L13Q9BXK5 485 aa18.95■□□□□ 0.62
COL9A2-202ENST00000372748 KIF1BO60333 1816 aa18.95■□□□□ 0.62
COL9A2-202ENST00000372748 WWC1Q8IX03 1113 aa18.95■□□□□ 0.62
COL9A2-202ENST00000372748 UBE2Q2Q8WVN8 375 aa18.95■□□□□ 0.62
COL9A2-202ENST00000372748 RSPH6AQ9H0K4 717 aa18.94■□□□□ 0.62
COL9A2-202ENST00000372748 SLC12A5Q9H2X9 1139 aa18.94■□□□□ 0.62
COL9A2-202ENST00000372748 MROH2AA6NES4 1674 aa18.94■□□□□ 0.62
COL9A2-202ENST00000372748 KIAA1210Q9ULL0 1709 aa18.94■□□□□ 0.62
COL9A2-202ENST00000372748 RRAGDQ9NQL2 400 aaPredicted RBP18.93■□□□□ 0.62
COL9A2-202ENST00000372748 MYOM2P54296 1465 aa18.93■□□□□ 0.62
COL9A2-202ENST00000372748 ANTXR1Q9H6X2 564 aa18.93■□□□□ 0.62
COL9A2-202ENST00000372748 PCDHB15Q9Y5E8 787 aa18.93■□□□□ 0.62
COL9A2-202ENST00000372748 PPRC1Q5VV67 1664 aaKnown RBP18.92■□□□□ 0.62
COL9A2-202ENST00000372748 EFCAB6Q5THR3 1501 aa18.92■□□□□ 0.62
COL9A2-202ENST00000372748 KIDINS220Q9ULH0 1771 aa18.92■□□□□ 0.62
COL9A2-202ENST00000372748 RLBP1P12271 317 aa18.91■□□□□ 0.62
COL9A2-202ENST00000372748 TBC1D2Q9BYX2 928 aa18.91■□□□□ 0.62
COL9A2-202ENST00000372748 NLRP1Q9C000 1473 aa18.91■□□□□ 0.62
COL9A2-202ENST00000372748 UPF2Q9HAU5 1272 aaKnown RBP18.91■□□□□ 0.62
COL9A2-202ENST00000372748 SLC24A1O60721 1099 aa18.91■□□□□ 0.62
COL9A2-202ENST00000372748 MORC1Q86VD1 984 aa18.91■□□□□ 0.62
COL9A2-202ENST00000372748 GZF1Q9H116 711 aaPredicted RBP18.91■□□□□ 0.62
COL9A2-202ENST00000372748 PDZRN3Q9UPQ7 1066 aa18.89■□□□□ 0.61
COL9A2-202ENST00000372748 NSD3Q9BZ95 1437 aa18.88■□□□□ 0.61
COL9A2-202ENST00000372748 TBC1D32Q96NH3 1257 aa18.88■□□□□ 0.61
COL9A2-202ENST00000372748 RARSP54136 660 aaKnown RBP18.88■□□□□ 0.61
COL9A2-202ENST00000372748 L1TD1Q5T7N2 865 aaKnown RBP18.87■□□□□ 0.61
COL9A2-202ENST00000372748 PMFBP1Q8TBY8 1022 aa18.86■□□□□ 0.61
COL9A2-202ENST00000372748 ZNF518AQ6AHZ1 1483 aa18.86■□□□□ 0.61
COL9A2-202ENST00000372748 NPATQ14207 1427 aa18.86■□□□□ 0.61
COL9A2-202ENST00000372748 VIRMAQ69YN4 1812 aaKnown RBP18.86■□□□□ 0.61
COL9A2-202ENST00000372748 IFT172Q9UG01 1749 aa18.86■□□□□ 0.61
COL9A2-202ENST00000372748 C14orf93Q9H972 538 aaKnown RBP18.86■□□□□ 0.61
COL9A2-202ENST00000372748 NEURL4Q96JN8 1562 aa18.86■□□□□ 0.61
COL9A2-202ENST00000372748 SAFB2Q14151 953 aaKnown RBP eCLIP18.85■□□□□ 0.61
COL9A2-202ENST00000372748 NRXN1Q9ULB1 1477 aa18.84■□□□□ 0.61
COL9A2-202ENST00000372748 XRCC6P12956 609 aaKnown RBP eCLIP18.84■□□□□ 0.61
COL9A2-202ENST00000372748 PANK2Q9BZ23 570 aa18.84■□□□□ 0.61
COL9A2-202ENST00000372748 TCP11L2Q8N4U5 519 aa18.83■□□□□ 0.61
COL9A2-202ENST00000372748 NINLQ9Y2I6 1382 aa18.83■□□□□ 0.61
COL9A2-202ENST00000372748 POLR3AO14802 1390 aaPredicted RBP18.83■□□□□ 0.6
COL9A2-202ENST00000372748 RIMBP3CA6NJZ7 1639 aa18.82■□□□□ 0.6
COL9A2-202ENST00000372748 RIMBP3BA6NNM3 1639 aa18.82■□□□□ 0.6
COL9A2-202ENST00000372748 RIMBP3Q9UFD9 1639 aa18.82■□□□□ 0.6
COL9A2-202ENST00000372748 RAPGEF3O95398 923 aa18.82■□□□□ 0.6
COL9A2-202ENST00000372748 ADGRB3O60242 1522 aa18.82■□□□□ 0.6
COL9A2-202ENST00000372748 CD109Q6YHK3 1445 aa18.82■□□□□ 0.6
COL9A2-202ENST00000372748 SBNO2Q9Y2G9 1366 aa18.82■□□□□ 0.6
COL9A2-202ENST00000372748 MTHFSP49914 203 aa18.82■□□□□ 0.6
COL9A2-202ENST00000372748 NGEFQ8N5V2 710 aa18.82■□□□□ 0.6
COL9A2-202ENST00000372748 GOLGA6L3A6NEY3 463 aa18.81■□□□□ 0.6
COL9A2-202ENST00000372748 MCM4P33991 863 aa18.8■□□□□ 0.6
COL9A2-202ENST00000372748 MFAP1P55081 439 aaKnown RBP18.8■□□□□ 0.6
COL9A2-202ENST00000372748 LMTK2Q8IWU2 1503 aa18.79■□□□□ 0.6
COL9A2-202ENST00000372748 FAM69CQ0P6D2 419 aa18.79■□□□□ 0.6
COL9A2-202ENST00000372748 RWDD1Q9H446 243 aaPredicted RBP18.79■□□□□ 0.6
COL9A2-202ENST00000372748 MYO3AQ8NEV4 1616 aa18.79■□□□□ 0.6
COL9A2-202ENST00000372748 RUNDC1Q96C34 613 aa18.79■□□□□ 0.6
COL9A2-202ENST00000372748 CABP2Q9NPB3 220 aa18.79■□□□□ 0.6
COL9A2-202ENST00000372748 FRMPD1Q5SYB0 1578 aa18.77■□□□□ 0.6
COL9A2-202ENST00000372748 POGZQ7Z3K3 1410 aa18.77■□□□□ 0.6
COL9A2-202ENST00000372748 QRICH2Q9H0J4 1663 aa18.77■□□□□ 0.6
COL9A2-202ENST00000372748 STK26Q9P289 416 aa18.77■□□□□ 0.6
COL9A2-202ENST00000372748 SETBP1Q9Y6X0 1596 aa18.76■□□□□ 0.59
COL9A2-202ENST00000372748 PPLO60437 1756 aa18.76■□□□□ 0.59
COL9A2-202ENST00000372748 C22orf23Q9BZE7 217 aa18.76■□□□□ 0.59
COL9A2-202ENST00000372748 ADGRB1O14514 1584 aa18.76■□□□□ 0.59
COL9A2-202ENST00000372748 FSD2A1L4K1 749 aa18.75■□□□□ 0.59
COL9A2-202ENST00000372748 TRAK2O60296 914 aa18.74■□□□□ 0.59
COL9A2-202ENST00000372748 FTSJ3Q8IY81 847 aaKnown RBP18.74■□□□□ 0.59
COL9A2-202ENST00000372748 NAP1L5Q96NT1 182 aaPredicted RBP18.74■□□□□ 0.59
COL9A2-202ENST00000372748 U2AF1L5P0DN76 240 aaPredicted RBP18.73■□□□□ 0.59
COL9A2-202ENST00000372748 U2AF1Q01081 240 aaKnown RBP eCLIP18.73■□□□□ 0.59
COL9A2-202ENST00000372748 MVPQ14764 893 aaKnown RBP18.73■□□□□ 0.59
COL9A2-202ENST00000372748 SHPRHQ149N8 1683 aa18.73■□□□□ 0.59
COL9A2-202ENST00000372748 EVC2Q86UK5 1308 aa18.73■□□□□ 0.59
COL9A2-202ENST00000372748 CFAP53Q96M91 514 aa18.73■□□□□ 0.59
COL9A2-202ENST00000372748 RPGRIP1LQ68CZ1 1315 aa18.73■□□□□ 0.59
COL9A2-202ENST00000372748 VGFO15240 615 aaPredicted RBP18.72■□□□□ 0.59
COL9A2-202ENST00000372748 CHMP5Q9NZZ3 219 aa18.72■□□□□ 0.59
COL9A2-202ENST00000372748 MLH3Q9UHC1 1453 aa18.72■□□□□ 0.59
COL9A2-202ENST00000372748 AAMPQ13685 434 aa18.71■□□□□ 0.59
COL9A2-202ENST00000372748 IDI1Q13907 227 aa18.71■□□□□ 0.59
COL9A2-202ENST00000372748 WDR63Q8IWG1 891 aa18.71■□□□□ 0.59
COL9A2-202ENST00000372748 TSR2Q969E8 191 aaKnown RBP18.71■□□□□ 0.59
COL9A2-202ENST00000372748 PNNQ9H307 717 aaKnown RBP18.71■□□□□ 0.59
COL9A2-202ENST00000372748 ABCC3O15438 1527 aa18.71■□□□□ 0.59
COL9A2-202ENST00000372748 PHF23Q9BUL5 403 aaPredicted RBP18.71■□□□□ 0.59
COL9A2-202ENST00000372748 ZC3H13Q5T200 1668 aaKnown RBP18.7■□□□□ 0.58
COL9A2-202ENST00000372748 HECW2Q9P2P5 1572 aa18.7■□□□□ 0.58
COL9A2-202ENST00000372748 ZKSCAN2Q63HK3 967 aa18.7■□□□□ 0.58
COL9A2-202ENST00000372748 DZIP1LQ8IYY4 767 aaKnown RBP18.7■□□□□ 0.58
COL9A2-202ENST00000372748 SRPK2P78362 688 aaKnown RBP18.69■□□□□ 0.58
COL9A2-202ENST00000372748 SIGLEC1Q9BZZ2 1709 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms