RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 NOM1Q5C9Z4 860 aaKnown RBP16.31■□□□□ 0.2
RAPGEF1-201ENST00000372189 STRN4Q9NRL3 753 aa16.3■□□□□ 0.2
RAPGEF1-201ENST00000372189 NOL10Q9BSC4 688 aaKnown RBP16.3■□□□□ 0.2
RAPGEF1-201ENST00000372189 API5Q9BZZ5 524 aaKnown RBP16.3■□□□□ 0.2
RAPGEF1-201ENST00000372189 CCDC141Q6ZP82 1450 aa16.3■□□□□ 0.2
RAPGEF1-201ENST00000372189 FOXD4L1Q9NU39 408 aa16.29■□□□□ 0.2
RAPGEF1-201ENST00000372189 ADGRL1O94910 1474 aa16.29■□□□□ 0.2
RAPGEF1-201ENST00000372189 RRP1P56182 461 aaKnown RBP16.29■□□□□ 0.2
RAPGEF1-201ENST00000372189 FKBP5Q13451 457 aaPredicted RBP16.29■□□□□ 0.2
RAPGEF1-201ENST00000372189 ZNF692Q9BU19 519 aaPredicted RBP16.29■□□□□ 0.2
RAPGEF1-201ENST00000372189 NUTM2BA6NNL0 878 aaPredicted RBP16.29■□□□□ 0.2
RAPGEF1-201ENST00000372189 NUTM2EB1AL46 878 aaPredicted RBP16.29■□□□□ 0.2
RAPGEF1-201ENST00000372189 NUTM2AQ8IVF1 878 aaPredicted RBP16.29■□□□□ 0.2
RAPGEF1-201ENST00000372189 KLHL34Q8N239 644 aa16.28■□□□□ 0.2
RAPGEF1-201ENST00000372189 UNC13AQ9UPW8 1703 aa16.28■□□□□ 0.2
RAPGEF1-201ENST00000372189 PLEKHO1Q53GL0 409 aaPredicted RBP16.28■□□□□ 0.2
RAPGEF1-201ENST00000372189 ZNF608Q9ULD9 1512 aaPredicted RBP16.28■□□□□ 0.2
RAPGEF1-201ENST00000372189 LRRFIP1Q32MZ4 808 aaKnown RBP16.28■□□□□ 0.2
RAPGEF1-201ENST00000372189 ANKRD45Q5TZF3 282 aa16.28■□□□□ 0.2
RAPGEF1-201ENST00000372189 RILPL2Q969X0 211 aa16.27■□□□□ 0.2
RAPGEF1-201ENST00000372189 RTEL1-TNFRSF6BF6WH68 1400 aa16.27■□□□□ 0.2
RAPGEF1-201ENST00000372189 PEG3Q9GZU2 1588 aa16.27■□□□□ 0.2
RAPGEF1-201ENST00000372189 PIP4K2BP78356 416 aa16.27■□□□□ 0.2
RAPGEF1-201ENST00000372189 ROCK1Q13464 1354 aa16.27■□□□□ 0.2
RAPGEF1-201ENST00000372189 VPS37DQ86XT2 251 aa16.27■□□□□ 0.2
RAPGEF1-201ENST00000372189 NBPF1Q3BBV0 1214 aa16.26■□□□□ 0.19
RAPGEF1-201ENST00000372189 GAS2L2Q8NHY3 880 aa16.26■□□□□ 0.19
RAPGEF1-201ENST00000372189 AMOTL1Q8IY63 956 aa16.26■□□□□ 0.19
RAPGEF1-201ENST00000372189 MTHFSP49914 203 aa16.25■□□□□ 0.19
RAPGEF1-201ENST00000372189 RIC3Q7Z5B4 369 aa16.25■□□□□ 0.19
RAPGEF1-201ENST00000372189 EXOC6Q8TAG9 804 aa16.25■□□□□ 0.19
RAPGEF1-201ENST00000372189 TRIM34Q9BYJ4 488 aa16.25■□□□□ 0.19
RAPGEF1-201ENST00000372189 ANKRD30BQ9BXX2 1392 aa16.25■□□□□ 0.19
RAPGEF1-201ENST00000372189 CABP1Q9NZU7 370 aa16.25■□□□□ 0.19
RAPGEF1-201ENST00000372189 TATP17735 454 aaPredicted RBP16.25■□□□□ 0.19
RAPGEF1-201ENST00000372189 DDX19BQ9UMR2 479 aa16.25■□□□□ 0.19
RAPGEF1-201ENST00000372189 PCF11O94913 1555 aaKnown RBP16.25■□□□□ 0.19
RAPGEF1-201ENST00000372189 FBXW7Q969H0 707 aa16.24■□□□□ 0.19
RAPGEF1-201ENST00000372189 CCDC34Q96HJ3 373 aa16.24■□□□□ 0.19
RAPGEF1-201ENST00000372189 SLC4A3P48751 1232 aa16.24■□□□□ 0.19
RAPGEF1-201ENST00000372189 PLIN1O60240 522 aa16.24■□□□□ 0.19
RAPGEF1-201ENST00000372189 CNTLNQ9NXG0 1405 aa16.24■□□□□ 0.19
RAPGEF1-201ENST00000372189 CAMSAP2Q08AD1 1489 aa16.24■□□□□ 0.19
RAPGEF1-201ENST00000372189 AIMP1Q12904 312 aaKnown RBP16.23■□□□□ 0.19
RAPGEF1-201ENST00000372189 COG6Q9Y2V7 657 aa16.23■□□□□ 0.19
RAPGEF1-201ENST00000372189 DDX49Q9Y6V7 483 aaKnown RBP16.23■□□□□ 0.19
RAPGEF1-201ENST00000372189 IFIT2P09913 472 aaKnown RBP16.23■□□□□ 0.19
RAPGEF1-201ENST00000372189 G3BP1Q13283 466 aaKnown RBP eCLIP16.23■□□□□ 0.19
RAPGEF1-201ENST00000372189 TOM1L2Q6ZVM7 507 aa16.22■□□□□ 0.19
RAPGEF1-201ENST00000372189 NOL8Q76FK4 1167 aaKnown RBP16.22■□□□□ 0.19
RAPGEF1-201ENST00000372189 DZIP1LQ8IYY4 767 aaKnown RBP16.22■□□□□ 0.19
RAPGEF1-201ENST00000372189 RBM33Q96EV2 1170 aaKnown RBP16.22■□□□□ 0.19
RAPGEF1-201ENST00000372189 CRBNQ96SW2 442 aa16.22■□□□□ 0.19
RAPGEF1-201ENST00000372189 SF3B2Q13435 895 aaKnown RBP16.22■□□□□ 0.19
RAPGEF1-201ENST00000372189 RBM42Q9BTD8 480 aaKnown RBP16.21■□□□□ 0.19
RAPGEF1-201ENST00000372189 KIF16BQ96L93 1317 aa16.21■□□□□ 0.19
RAPGEF1-201ENST00000372189 DIAPH3Q9NSV4 1193 aa16.2■□□□□ 0.18
RAPGEF1-201ENST00000372189 WASHC2AQ641Q2 1341 aa16.2■□□□□ 0.18
RAPGEF1-201ENST00000372189 RASSF8Q8NHQ8 419 aa16.2■□□□□ 0.18
RAPGEF1-201ENST00000372189 AKNAQ7Z591 1439 aa16.2■□□□□ 0.18
RAPGEF1-201ENST00000372189 SLC12A5Q9H2X9 1139 aa16.2■□□□□ 0.18
RAPGEF1-201ENST00000372189 KIF3AQ9Y496 699 aa16.2■□□□□ 0.18
RAPGEF1-201ENST00000372189 DENND4BO75064 1496 aaPredicted RBP16.2■□□□□ 0.18
RAPGEF1-201ENST00000372189 VPS53Q5VIR6 699 aa16.19■□□□□ 0.18
RAPGEF1-201ENST00000372189 NCBP3Q53F19 620 aaKnown RBP16.19■□□□□ 0.18
RAPGEF1-201ENST00000372189 MARCH6O60337 910 aa16.19■□□□□ 0.18
RAPGEF1-201ENST00000372189 KIF6Q6ZMV9 814 aa16.18■□□□□ 0.18
RAPGEF1-201ENST00000372189 TAF3Q5VWG9 929 aa16.18■□□□□ 0.18
RAPGEF1-201ENST00000372189 RUFY2Q8WXA3 655 aa16.18■□□□□ 0.18
RAPGEF1-201ENST00000372189 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.17■□□□□ 0.18
RAPGEF1-201ENST00000372189 PRKAR2BP31323 418 aa16.17■□□□□ 0.18
RAPGEF1-201ENST00000372189 PPP2R1AP30153 589 aa16.17■□□□□ 0.18
RAPGEF1-201ENST00000372189 PRDM11Q9NQV5 511 aa16.17■□□□□ 0.18
RAPGEF1-201ENST00000372189 SPG7Q9UQ90 795 aa16.17■□□□□ 0.18
RAPGEF1-201ENST00000372189 DCAF8L1A6NGE4 600 aa16.17■□□□□ 0.18
RAPGEF1-201ENST00000372189 HSP90AB4PQ58FF6 505 aa16.17■□□□□ 0.18
RAPGEF1-201ENST00000372189 ATP6V1DQ9Y5K8 247 aa16.17■□□□□ 0.18
RAPGEF1-201ENST00000372189 CHMP4CQ96CF2 233 aa16.17■□□□□ 0.18
RAPGEF1-201ENST00000372189 ATAD2Q6PL18 1390 aa16.17■□□□□ 0.18
RAPGEF1-201ENST00000372189 CCDC30Q5VVM6 783 aa16.16■□□□□ 0.18
RAPGEF1-201ENST00000372189 SYNE3Q6ZMZ3 975 aa16.16■□□□□ 0.18
RAPGEF1-201ENST00000372189 FANCAO15360 1455 aa16.16■□□□□ 0.18
RAPGEF1-201ENST00000372189 FOXD4L5Q5VV16 416 aaPredicted RBP16.16■□□□□ 0.18
RAPGEF1-201ENST00000372189 FOXD4L4Q8WXT5 416 aaPredicted RBP16.16■□□□□ 0.18
RAPGEF1-201ENST00000372189 BRD4O60885 1362 aaPredicted RBP16.16■□□□□ 0.18
RAPGEF1-201ENST00000372189 CTDP1Q9Y5B0 961 aaPredicted RBP16.16■□□□□ 0.18
RAPGEF1-201ENST00000372189 AKAP17AQ02040 695 aaKnown RBP16.16■□□□□ 0.18
RAPGEF1-201ENST00000372189 CABP4P57796 275 aa16.15■□□□□ 0.18
RAPGEF1-201ENST00000372189 MAP7D2Q96T17 732 aa16.15■□□□□ 0.18
RAPGEF1-201ENST00000372189 DDX54Q8TDD1 881 aaKnown RBP16.15■□□□□ 0.18
RAPGEF1-201ENST00000372189 ANO8Q9HCE9 1232 aaPredicted RBP16.15■□□□□ 0.18
RAPGEF1-201ENST00000372189 RRP12Q5JTH9 1297 aaKnown RBP16.15■□□□□ 0.18
RAPGEF1-201ENST00000372189 PTPN23Q9H3S7 1636 aa16.15■□□□□ 0.18
RAPGEF1-201ENST00000372189 BIVM-ERCC5R4GMW8 1640 aa16.15■□□□□ 0.18
RAPGEF1-201ENST00000372189 RAD21O60216 631 aa16.15■□□□□ 0.18
RAPGEF1-201ENST00000372189 XPCQ01831 940 aaPredicted RBP16.15■□□□□ 0.18
RAPGEF1-201ENST00000372189 CHMP5Q9NZZ3 219 aa16.15■□□□□ 0.18
RAPGEF1-201ENST00000372189 ADAMTS8Q9UP79 889 aa16.14■□□□□ 0.17
RAPGEF1-201ENST00000372189 PPP6R1Q9UPN7 881 aa16.14■□□□□ 0.17
RAPGEF1-201ENST00000372189 CCDC66A2RUB6 948 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms