RNA–Protein interactions for RNA: ENST00000369727.3

SFR1-201, Transcript of SWI5 dependent homologous recombination repair protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SFR1, Length 1,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFR1-201ENST00000369727 CFAP43Q8NDM7 1665 aa12.25□□□□□ -0.45
SFR1-201ENST00000369727 TTC13Q8NBP0 860 aa12.24□□□□□ -0.45
SFR1-201ENST00000369727 HPS5Q9UPZ3 1129 aa12.24□□□□□ -0.45
SFR1-201ENST00000369727 SAMD7Q7Z3H4 446 aa12.23□□□□□ -0.45
SFR1-201ENST00000369727 TSR3Q9UJK0 312 aaKnown RBP12.23□□□□□ -0.45
SFR1-201ENST00000369727 NUP153P49790 1475 aaKnown RBP12.22□□□□□ -0.45
SFR1-201ENST00000369727 MAGI3Q5TCQ9 1506 aa12.22□□□□□ -0.45
SFR1-201ENST00000369727 CD109Q6YHK3 1445 aa12.21□□□□□ -0.46
SFR1-201ENST00000369727 ARID3CA6NKF2 412 aa12.2□□□□□ -0.46
SFR1-201ENST00000369727 NYAP1Q6ZVC0 841 aa12.2□□□□□ -0.46
SFR1-201ENST00000369727 KDM2AQ9Y2K7 1162 aa12.2□□□□□ -0.46
SFR1-201ENST00000369727 NUTM2FA1L443 756 aa12.2□□□□□ -0.46
SFR1-201ENST00000369727 PTGDRQ13258 359 aa12.2□□□□□ -0.46
SFR1-201ENST00000369727 IFFO2Q5TF58 517 aa12.19□□□□□ -0.46
SFR1-201ENST00000369727 ARHGAP35Q9NRY4 1499 aa12.18□□□□□ -0.46
SFR1-201ENST00000369727 ABCA9Q8IUA7 1624 aa12.18□□□□□ -0.46
SFR1-201ENST00000369727 FMN1Q68DA7 1419 aa12.18□□□□□ -0.46
SFR1-201ENST00000369727 COL17A1Q9UMD9 1497 aaPredicted RBP12.17□□□□□ -0.46
SFR1-201ENST00000369727 PPP4CP60510 307 aa12.17□□□□□ -0.46
SFR1-201ENST00000369727 TESPA1A2RU30 521 aaPredicted RBP12.15□□□□□ -0.46
SFR1-201ENST00000369727 PLEKHD1A6NEE1 506 aa12.15□□□□□ -0.46
SFR1-201ENST00000369727 ITGBL1O95965 494 aaPredicted RBP12.15□□□□□ -0.46
SFR1-201ENST00000369727 HDGFP51858 240 aaKnown RBP12.14□□□□□ -0.47
SFR1-201ENST00000369727 PHLDB1Q86UU1 1377 aa12.14□□□□□ -0.47
SFR1-201ENST00000369727 RNF40O75150 1001 aa12.13□□□□□ -0.47
SFR1-201ENST00000369727 EYA1Q99502 592 aa12.13□□□□□ -0.47
SFR1-201ENST00000369727 HECW1Q76N89 1606 aa12.13□□□□□ -0.47
SFR1-201ENST00000369727 ARAP3Q8WWN8 1544 aa12.12□□□□□ -0.47
SFR1-201ENST00000369727 A0A0G2JS52 829 aa12.11□□□□□ -0.47
SFR1-201ENST00000369727 SWT1Q5T5J6 900 aaKnown RBP12.11□□□□□ -0.47
SFR1-201ENST00000369727 FCHSD2O94868 740 aa12.11□□□□□ -0.47
SFR1-201ENST00000369727 RBM26Q5T8P6 1007 aaKnown RBP12.11□□□□□ -0.47
SFR1-201ENST00000369727 NEO1Q92859 1461 aa12.1□□□□□ -0.47
SFR1-201ENST00000369727 CDK13Q14004 1512 aaKnown RBP12.1□□□□□ -0.47
SFR1-201ENST00000369727 SMYD5Q6GMV2 418 aa12.1□□□□□ -0.47
SFR1-201ENST00000369727 KCNC4Q03721 635 aa12.09□□□□□ -0.47
SFR1-201ENST00000369727 FAM161AQ3B820 660 aa12.08□□□□□ -0.48
SFR1-201ENST00000369727 CDK11AQ9UQ88 783 aaPredicted RBP12.08□□□□□ -0.48
SFR1-201ENST00000369727 ADGRG1Q9Y653 693 aa12.08□□□□□ -0.48
SFR1-201ENST00000369727 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.07□□□□□ -0.48
SFR1-201ENST00000369727 VSIG10Q8N0Z9 540 aa12.07□□□□□ -0.48
SFR1-201ENST00000369727 ATP1B4Q9UN42 357 aaPredicted RBP12.07□□□□□ -0.48
SFR1-201ENST00000369727 RBM46Q8TBY0 533 aaKnown RBP12.06□□□□□ -0.48
SFR1-201ENST00000369727 CLIP1P30622 1438 aa12.06□□□□□ -0.48
SFR1-201ENST00000369727 CASKIN1Q8WXD9 1431 aa12.06□□□□□ -0.48
SFR1-201ENST00000369727 TTC37Q6PGP7 1564 aa12.05□□□□□ -0.48
SFR1-201ENST00000369727 CFAP74Q9C0B2 1584 aa12.05□□□□□ -0.48
SFR1-201ENST00000369727 SLF2Q8IX21 1173 aa12.05□□□□□ -0.48
SFR1-201ENST00000369727 LRRIQ1Q96JM4 1722 aa12.04□□□□□ -0.48
SFR1-201ENST00000369727 PCF11O94913 1555 aaKnown RBP12.04□□□□□ -0.48
SFR1-201ENST00000369727 APLP1P51693 650 aa12.03□□□□□ -0.48
SFR1-201ENST00000369727 TROQ12816 1431 aaPredicted RBP12.03□□□□□ -0.48
SFR1-201ENST00000369727 FANCAO15360 1455 aa12.03□□□□□ -0.48
SFR1-201ENST00000369727 CCDC18Q5T9S5 1454 aa12.03□□□□□ -0.48
SFR1-201ENST00000369727 DNAJB2P25686 324 aa12.03□□□□□ -0.48
SFR1-201ENST00000369727 TJAP1Q5JTD0 557 aa12.03□□□□□ -0.48
SFR1-201ENST00000369727 ADGRL1O94910 1474 aa12.02□□□□□ -0.49
SFR1-201ENST00000369727 FYCO1Q9BQS8 1478 aa12.02□□□□□ -0.49
SFR1-201ENST00000369727 PLCH2O75038 1416 aa12.02□□□□□ -0.49
SFR1-201ENST00000369727 SLC4A3P48751 1232 aa12.02□□□□□ -0.49
SFR1-201ENST00000369727 HIC1Q14526 733 aa12.02□□□□□ -0.49
SFR1-201ENST00000369727 AKNAQ7Z591 1439 aa12.02□□□□□ -0.49
SFR1-201ENST00000369727 KIF14Q15058 1648 aa12.01□□□□□ -0.49
SFR1-201ENST00000369727 NECTIN2Q92692 538 aa12.01□□□□□ -0.49
SFR1-201ENST00000369727 MTRQ99707 1265 aa12.01□□□□□ -0.49
SFR1-201ENST00000369727 DENND4BO75064 1496 aaPredicted RBP12□□□□□ -0.49
SFR1-201ENST00000369727 MYO5CQ9NQX4 1742 aa12□□□□□ -0.49
SFR1-201ENST00000369727 FRMPD1Q5SYB0 1578 aa12□□□□□ -0.49
SFR1-201ENST00000369727 RCCD1A6NED2 376 aa12□□□□□ -0.49
SFR1-201ENST00000369727 RGS20O76081 388 aa12□□□□□ -0.49
SFR1-201ENST00000369727 RAPGEF3O95398 923 aa12□□□□□ -0.49
SFR1-201ENST00000369727 TMEM134Q9H6X4 195 aa12□□□□□ -0.49
SFR1-201ENST00000369727 RICTORQ6R327 1708 aa11.99□□□□□ -0.49
SFR1-201ENST00000369727 GPR37O15354 613 aa11.98□□□□□ -0.49
SFR1-201ENST00000369727 FECHP22830 423 aa11.98□□□□□ -0.49
SFR1-201ENST00000369727 GNPATO15228 680 aa11.97□□□□□ -0.49
SFR1-201ENST00000369727 EFCAB2Q5VUJ9 269 aa11.97□□□□□ -0.49
SFR1-201ENST00000369727 IL21Q9HBE4 155 aa11.97□□□□□ -0.49
SFR1-201ENST00000369727 CEP162Q5TB80 1403 aa11.96□□□□□ -0.49
SFR1-201ENST00000369727 ZMYM4Q5VZL5 1548 aa11.95□□□□□ -0.5
SFR1-201ENST00000369727 OATP04181 439 aa11.95□□□□□ -0.5
SFR1-201ENST00000369727 PXYLP1Q8TE99 480 aa11.95□□□□□ -0.5
SFR1-201ENST00000369727 ZNF516Q92618 1163 aa11.94□□□□□ -0.5
SFR1-201ENST00000369727 SCAPERQ9BY12 1400 aa11.94□□□□□ -0.5
SFR1-201ENST00000369727 ARHGEF40Q8TER5 1519 aa11.94□□□□□ -0.5
SFR1-201ENST00000369727 POGZQ7Z3K3 1410 aa11.94□□□□□ -0.5
SFR1-201ENST00000369727 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.94□□□□□ -0.5
SFR1-201ENST00000369727 GPIHBP1Q8IV16 184 aa11.94□□□□□ -0.5
SFR1-201ENST00000369727 MAGI2Q86UL8 1455 aa11.93□□□□□ -0.5
SFR1-201ENST00000369727 ARHGAP5Q13017 1502 aa11.93□□□□□ -0.5
SFR1-201ENST00000369727 CDC42BPBQ9Y5S2 1711 aa11.93□□□□□ -0.5
SFR1-201ENST00000369727 COPS2P61201 443 aa11.93□□□□□ -0.5
SFR1-201ENST00000369727 PREX2Q70Z35 1606 aa11.92□□□□□ -0.5
SFR1-201ENST00000369727 METTL3Q86U44 580 aaKnown RBP11.92□□□□□ -0.5
SFR1-201ENST00000369727 ZFYVE16Q7Z3T8 1539 aa11.91□□□□□ -0.5
SFR1-201ENST00000369727 CDC42BPAQ5VT25 1732 aa11.9□□□□□ -0.5
SFR1-201ENST00000369727 PRR14Q9BWN1 585 aa11.9□□□□□ -0.5
SFR1-201ENST00000369727 ADAMTSL3P82987 1691 aa11.9□□□□□ -0.5
SFR1-201ENST00000369727 ZNF518AQ6AHZ1 1483 aa11.9□□□□□ -0.51
SFR1-201ENST00000369727 BCORL1Q5H9F3 1711 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms