RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 ZNF692Q9BU19 519 aaPredicted RBP18.03■□□□□ 0.48
PHTF1-204ENST00000369604 ABCC10Q5T3U5 1492 aa18.02■□□□□ 0.48
PHTF1-204ENST00000369604 CARD14Q9BXL6 1004 aa18.02■□□□□ 0.47
PHTF1-204ENST00000369604 GOLGA6L22H0YM25 854 aa18.01■□□□□ 0.47
PHTF1-204ENST00000369604 GRIN2AQ12879 1464 aa18.01■□□□□ 0.47
PHTF1-204ENST00000369604 NPC1L1Q9UHC9 1359 aa18.01■□□□□ 0.47
PHTF1-204ENST00000369604 SMC4Q9NTJ3 1288 aa18.01■□□□□ 0.47
PHTF1-204ENST00000369604 NCLP19338 710 aaKnown RBP18■□□□□ 0.47
PHTF1-204ENST00000369604 CCDC173Q0VFZ6 552 aa18■□□□□ 0.47
PHTF1-204ENST00000369604 FAM13BQ9NYF5 915 aa17.99■□□□□ 0.47
PHTF1-204ENST00000369604 ZSCAN30Q86W11 494 aa17.99■□□□□ 0.47
PHTF1-204ENST00000369604 WDR63Q8IWG1 891 aa17.99■□□□□ 0.47
PHTF1-204ENST00000369604 DDX49Q9Y6V7 483 aaKnown RBP17.99■□□□□ 0.47
PHTF1-204ENST00000369604 ATP10BO94823 1461 aa17.98■□□□□ 0.47
PHTF1-204ENST00000369604 SCAF11Q99590 1463 aaKnown RBP17.98■□□□□ 0.47
PHTF1-204ENST00000369604 ARID3AQ99856 593 aa17.98■□□□□ 0.47
PHTF1-204ENST00000369604 SYNJ2O15056 1496 aa17.98■□□□□ 0.47
PHTF1-204ENST00000369604 LNPKQ9C0E8 428 aa17.98■□□□□ 0.47
PHTF1-204ENST00000369604 PTMSP20962 102 aa17.97■□□□□ 0.47
PHTF1-204ENST00000369604 CIZ1Q9ULV3 898 aaPredicted RBP17.97■□□□□ 0.47
PHTF1-204ENST00000369604 SYNMO15061 1565 aa17.97■□□□□ 0.47
PHTF1-204ENST00000369604 RAB3GAP1Q15042 981 aa17.97■□□□□ 0.47
PHTF1-204ENST00000369604 TSR2Q969E8 191 aaKnown RBP17.97■□□□□ 0.47
PHTF1-204ENST00000369604 R3HCC1Q9Y3T6 440 aaKnown RBP17.97■□□□□ 0.47
PHTF1-204ENST00000369604 SMC5Q8IY18 1101 aa17.96■□□□□ 0.47
PHTF1-204ENST00000369604 RTEL1-TNFRSF6BF6WH68 1400 aa17.96■□□□□ 0.47
PHTF1-204ENST00000369604 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.96■□□□□ 0.47
PHTF1-204ENST00000369604 MYO5CQ9NQX4 1742 aa17.95■□□□□ 0.46
PHTF1-204ENST00000369604 U2AF1L5P0DN76 240 aaPredicted RBP17.95■□□□□ 0.46
PHTF1-204ENST00000369604 U2AF1Q01081 240 aaKnown RBP eCLIP17.95■□□□□ 0.46
PHTF1-204ENST00000369604 SNX21Q969T3 373 aa17.95■□□□□ 0.46
PHTF1-204ENST00000369604 CFAP53Q96M91 514 aa17.95■□□□□ 0.46
PHTF1-204ENST00000369604 DDX19BQ9UMR2 479 aa17.95■□□□□ 0.46
PHTF1-204ENST00000369604 SSFA2P28290 1259 aa17.94■□□□□ 0.46
PHTF1-204ENST00000369604 CFAP70Q5T0N1 1121 aa17.94■□□□□ 0.46
PHTF1-204ENST00000369604 POLR3AO14802 1390 aaPredicted RBP17.94■□□□□ 0.46
PHTF1-204ENST00000369604 OFD1O75665 1012 aa17.94■□□□□ 0.46
PHTF1-204ENST00000369604 ARHGEF5Q12774 1597 aa17.94■□□□□ 0.46
PHTF1-204ENST00000369604 RBM25P49756 843 aaKnown RBP17.93■□□□□ 0.46
PHTF1-204ENST00000369604 DDIT3P35638 169 aa17.93■□□□□ 0.46
PHTF1-204ENST00000369604 MTHFSP49914 203 aa17.93■□□□□ 0.46
PHTF1-204ENST00000369604 HDAC1Q13547 482 aaPredicted RBP17.93■□□□□ 0.46
PHTF1-204ENST00000369604 TRIM27P14373 513 aa17.92■□□□□ 0.46
PHTF1-204ENST00000369604 EXOSC9Q06265 439 aaKnown RBP17.92■□□□□ 0.46
PHTF1-204ENST00000369604 PLXNC1O60486 1568 aa17.91■□□□□ 0.46
PHTF1-204ENST00000369604 PPP1R9BQ96SB3 815 aa17.91■□□□□ 0.46
PHTF1-204ENST00000369604 SLC24A1O60721 1099 aa17.9■□□□□ 0.46
PHTF1-204ENST00000369604 RBM42Q9BTD8 480 aaKnown RBP17.9■□□□□ 0.46
PHTF1-204ENST00000369604 K7ELQ4 463 aaPredicted RBP17.9■□□□□ 0.46
PHTF1-204ENST00000369604 CD2BP2O95400 341 aaKnown RBP17.9■□□□□ 0.46
PHTF1-204ENST00000369604 NOB1Q9ULX3 412 aaKnown RBP17.9■□□□□ 0.46
PHTF1-204ENST00000369604 SSH1Q8WYL5 1049 aa17.89■□□□□ 0.45
PHTF1-204ENST00000369604 SCAPERQ9BY12 1400 aa17.89■□□□□ 0.45
PHTF1-204ENST00000369604 CALD1Q05682 793 aaKnown RBP17.89■□□□□ 0.45
PHTF1-204ENST00000369604 ATF7IPQ6VMQ6 1270 aa17.89■□□□□ 0.45
PHTF1-204ENST00000369604 SYCP2Q9BX26 1530 aa17.89■□□□□ 0.45
PHTF1-204ENST00000369604 MCTP1Q6DN14 999 aa17.89■□□□□ 0.45
PHTF1-204ENST00000369604 CAVIN1Q6NZI2 390 aaKnown RBP17.89■□□□□ 0.45
PHTF1-204ENST00000369604 TMEM57Q8N5G2 664 aa17.89■□□□□ 0.45
PHTF1-204ENST00000369604 ANKRD45Q5TZF3 282 aa17.88■□□□□ 0.45
PHTF1-204ENST00000369604 SLC12A5Q9H2X9 1139 aa17.88■□□□□ 0.45
PHTF1-204ENST00000369604 SAMD9LQ8IVG5 1584 aa17.88■□□□□ 0.45
PHTF1-204ENST00000369604 RIPK4P57078 832 aa17.88■□□□□ 0.45
PHTF1-204ENST00000369604 NCOA3Q9Y6Q9 1424 aa17.88■□□□□ 0.45
PHTF1-204ENST00000369604 XPCQ01831 940 aaPredicted RBP17.87■□□□□ 0.45
PHTF1-204ENST00000369604 GAS2L2Q8NHY3 880 aa17.87■□□□□ 0.45
PHTF1-204ENST00000369604 ARHGAP5Q13017 1502 aa17.87■□□□□ 0.45
PHTF1-204ENST00000369604 U2SURPO15042 1029 aaKnown RBP17.87■□□□□ 0.45
PHTF1-204ENST00000369604 BAG4O95429 457 aaKnown RBP17.87■□□□□ 0.45
PHTF1-204ENST00000369604 KLHL40Q2TBA0 621 aa17.87■□□□□ 0.45
PHTF1-204ENST00000369604 CHD1LQ86WJ1 897 aa17.87■□□□□ 0.45
PHTF1-204ENST00000369604 RNF17Q9BXT8 1623 aaKnown RBP17.86■□□□□ 0.45
PHTF1-204ENST00000369604 NSD3Q9BZ95 1437 aa17.86■□□□□ 0.45
PHTF1-204ENST00000369604 PHF23Q9BUL5 403 aaPredicted RBP17.86■□□□□ 0.45
PHTF1-204ENST00000369604 UQCRHLA0A096LP55 91 aa17.85■□□□□ 0.45
PHTF1-204ENST00000369604 UQCRHP07919 91 aa17.85■□□□□ 0.45
PHTF1-204ENST00000369604 NUCB1Q02818 461 aa17.85■□□□□ 0.45
PHTF1-204ENST00000369604 CCDC27Q2M243 656 aa17.85■□□□□ 0.45
PHTF1-204ENST00000369604 STAC3Q96MF2 364 aa17.85■□□□□ 0.45
PHTF1-204ENST00000369604 UNC13BO14795 1591 aa17.84■□□□□ 0.45
PHTF1-204ENST00000369604 MAP7D2Q96T17 732 aa17.84■□□□□ 0.45
PHTF1-204ENST00000369604 ABCA8O94911 1581 aa17.84■□□□□ 0.45
PHTF1-204ENST00000369604 OSCARQ8IYS5 282 aa17.84■□□□□ 0.45
PHTF1-204ENST00000369604 ATP10AO60312 1499 aa17.84■□□□□ 0.45
PHTF1-204ENST00000369604 ZBTB7CA1YPR0 619 aa17.83■□□□□ 0.44
PHTF1-204ENST00000369604 IPO8O15397 1037 aaKnown RBP17.83■□□□□ 0.44
PHTF1-204ENST00000369604 PODXL2Q9NZ53 605 aa17.83■□□□□ 0.44
PHTF1-204ENST00000369604 KDM5AP29375 1690 aaKnown RBP17.83■□□□□ 0.44
PHTF1-204ENST00000369604 IQGAP1P46940 1657 aa17.83■□□□□ 0.44
PHTF1-204ENST00000369604 MADDQ8WXG6 1647 aa17.82■□□□□ 0.44
PHTF1-204ENST00000369604 KIF2CQ99661 725 aa17.82■□□□□ 0.44
PHTF1-204ENST00000369604 ZBTB40Q9NUA8 1239 aa17.82■□□□□ 0.44
PHTF1-204ENST00000369604 TRAK1Q9UPV9 953 aa17.82■□□□□ 0.44
PHTF1-204ENST00000369604 CHD1O14646 1710 aa17.82■□□□□ 0.44
PHTF1-204ENST00000369604 BMP2KLQ5H9B9 411 aa17.82■□□□□ 0.44
PHTF1-204ENST00000369604 IQGAP3Q86VI3 1631 aa17.81■□□□□ 0.44
PHTF1-204ENST00000369604 CHGAP10645 457 aaKnown RBP17.81■□□□□ 0.44
PHTF1-204ENST00000369604 TBC1D9Q6ZT07 1266 aa17.81■□□□□ 0.44
PHTF1-204ENST00000369604 ERVK-7P63135 1459 aa17.81■□□□□ 0.44
PHTF1-204ENST00000369604 CT47B1P0C2W7 299 aaPredicted RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms