RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 CD2BP2O95400 341 aaKnown RBP23.47■■□□□ 1.35
PRDM1-202ENST00000369091 SMAP1Q8IYB5 467 aaPredicted RBP23.47■■□□□ 1.35
PRDM1-202ENST00000369091 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.47■■□□□ 1.35
PRDM1-202ENST00000369091 CIZ1Q9ULV3 898 aaPredicted RBP23.46■■□□□ 1.35
PRDM1-202ENST00000369091 SHANK2Q9UPX8 1470 aa23.46■■□□□ 1.35
PRDM1-202ENST00000369091 HNRNPMP52272 730 aaKnown RBP eCLIP23.46■■□□□ 1.35
PRDM1-202ENST00000369091 SNX21Q969T3 373 aa23.46■■□□□ 1.35
PRDM1-202ENST00000369091 MYO5CQ9NQX4 1742 aa23.45■■□□□ 1.35
PRDM1-202ENST00000369091 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.45■■□□□ 1.34
PRDM1-202ENST00000369091 DDX49Q9Y6V7 483 aaKnown RBP23.45■■□□□ 1.34
PRDM1-202ENST00000369091 MVPQ14764 893 aaKnown RBP23.43■■□□□ 1.34
PRDM1-202ENST00000369091 RBM25P49756 843 aaKnown RBP23.43■■□□□ 1.34
PRDM1-202ENST00000369091 EIF2AK4Q9P2K8 1649 aaKnown RBP23.42■■□□□ 1.34
PRDM1-202ENST00000369091 CCDC141Q6ZP82 1450 aa23.42■■□□□ 1.34
PRDM1-202ENST00000369091 SYNMO15061 1565 aa23.42■■□□□ 1.34
PRDM1-202ENST00000369091 PBRM1Q86U86 1689 aa23.42■■□□□ 1.34
PRDM1-202ENST00000369091 ADAMTS12P58397 1594 aa23.41■■□□□ 1.34
PRDM1-202ENST00000369091 NOL7Q9UMY1 257 aaKnown RBP23.41■■□□□ 1.34
PRDM1-202ENST00000369091 ZNF500O60304 480 aaPredicted RBP23.4■■□□□ 1.34
PRDM1-202ENST00000369091 PTMSP20962 102 aa23.4■■□□□ 1.34
PRDM1-202ENST00000369091 PLB1Q6P1J6 1458 aa23.39■■□□□ 1.34
PRDM1-202ENST00000369091 NCLP19338 710 aaKnown RBP23.39■■□□□ 1.33
PRDM1-202ENST00000369091 KLHL40Q2TBA0 621 aa23.39■■□□□ 1.33
PRDM1-202ENST00000369091 RBM42Q9BTD8 480 aaKnown RBP23.39■■□□□ 1.33
PRDM1-202ENST00000369091 FGD1P98174 961 aa23.38■■□□□ 1.33
PRDM1-202ENST00000369091 KIF2CQ99661 725 aa23.38■■□□□ 1.33
PRDM1-202ENST00000369091 RBSNQ9H1K0 784 aa23.38■■□□□ 1.33
PRDM1-202ENST00000369091 FTSJ3Q8IY81 847 aaKnown RBP23.38■■□□□ 1.33
PRDM1-202ENST00000369091 TARBP1Q13395 1621 aaKnown RBP23.37■■□□□ 1.33
PRDM1-202ENST00000369091 CAVIN1Q6NZI2 390 aaKnown RBP23.37■■□□□ 1.33
PRDM1-202ENST00000369091 SCAPERQ9BY12 1400 aa23.37■■□□□ 1.33
PRDM1-202ENST00000369091 BAG4O95429 457 aaKnown RBP23.37■■□□□ 1.33
PRDM1-202ENST00000369091 GAS2L2Q8NHY3 880 aa23.37■■□□□ 1.33
PRDM1-202ENST00000369091 RNF17Q9BXT8 1623 aaKnown RBP23.37■■□□□ 1.33
PRDM1-202ENST00000369091 NGEFQ8N5V2 710 aa23.36■■□□□ 1.33
PRDM1-202ENST00000369091 IFT140Q96RY7 1462 aa23.36■■□□□ 1.33
PRDM1-202ENST00000369091 NUP160Q12769 1436 aa23.36■■□□□ 1.33
PRDM1-202ENST00000369091 GOLGA6L22H0YM25 854 aa23.36■■□□□ 1.33
PRDM1-202ENST00000369091 DYNC1I1O14576 645 aa23.36■■□□□ 1.33
PRDM1-202ENST00000369091 ZBTB7CA1YPR0 619 aa23.35■■□□□ 1.33
PRDM1-202ENST00000369091 MYOM1P52179 1685 aa23.35■■□□□ 1.33
PRDM1-202ENST00000369091 IBTKQ9P2D0 1353 aaPredicted RBP23.34■■□□□ 1.33
PRDM1-202ENST00000369091 JARID2Q92833 1246 aaPredicted RBP23.34■■□□□ 1.33
PRDM1-202ENST00000369091 NPC1L1Q9UHC9 1359 aa23.34■■□□□ 1.33
PRDM1-202ENST00000369091 ZSCAN23Q3MJ62 389 aa23.34■■□□□ 1.33
PRDM1-202ENST00000369091 DZIP1LQ8IYY4 767 aaKnown RBP23.34■■□□□ 1.33
PRDM1-202ENST00000369091 TCP11L2Q8N4U5 519 aa23.34■■□□□ 1.33
PRDM1-202ENST00000369091 SYNJ2O15056 1496 aa23.34■■□□□ 1.33
PRDM1-202ENST00000369091 K7ELQ4 463 aaPredicted RBP23.33■■□□□ 1.33
PRDM1-202ENST00000369091 HS1BP3Q53T59 392 aa23.33■■□□□ 1.33
PRDM1-202ENST00000369091 MCTP1Q6DN14 999 aa23.33■■□□□ 1.33
PRDM1-202ENST00000369091 ZNF445P59923 1031 aa23.32■■□□□ 1.32
PRDM1-202ENST00000369091 PDLIM2Q96JY6 352 aa23.32■■□□□ 1.32
PRDM1-202ENST00000369091 ZKSCAN5Q9Y2L8 839 aa23.32■■□□□ 1.32
PRDM1-202ENST00000369091 DMTNQ08495 405 aa23.32■■□□□ 1.32
PRDM1-202ENST00000369091 CDCA8Q53HL2 280 aa23.32■■□□□ 1.32
PRDM1-202ENST00000369091 ZKSCAN2Q63HK3 967 aa23.32■■□□□ 1.32
PRDM1-202ENST00000369091 PRIM1P49642 420 aaKnown RBP23.31■■□□□ 1.32
PRDM1-202ENST00000369091 MTERF4Q7Z6M4 381 aaKnown RBP23.31■■□□□ 1.32
PRDM1-202ENST00000369091 LNPKQ9C0E8 428 aa23.31■■□□□ 1.32
PRDM1-202ENST00000369091 TNNT2P45379 298 aaPredicted RBP23.3■■□□□ 1.32
PRDM1-202ENST00000369091 ITPRIPQ8IWB1 547 aa23.3■■□□□ 1.32
PRDM1-202ENST00000369091 CARD14Q9BXL6 1004 aa23.3■■□□□ 1.32
PRDM1-202ENST00000369091 HDAC1Q13547 482 aaPredicted RBP23.3■■□□□ 1.32
PRDM1-202ENST00000369091 SASS6Q6UVJ0 657 aa23.3■■□□□ 1.32
PRDM1-202ENST00000369091 RBM27Q9P2N5 1060 aaKnown RBP23.29■■□□□ 1.32
PRDM1-202ENST00000369091 SHROOM2Q13796 1616 aa23.29■■□□□ 1.32
PRDM1-202ENST00000369091 CCDC94Q9BW85 323 aaPredicted RBP23.29■■□□□ 1.32
PRDM1-202ENST00000369091 GRIN2AQ12879 1464 aa23.29■■□□□ 1.32
PRDM1-202ENST00000369091 ZSCAN20P17040 1043 aaPredicted RBP23.29■■□□□ 1.32
PRDM1-202ENST00000369091 TSC1Q92574 1164 aa23.28■■□□□ 1.32
PRDM1-202ENST00000369091 RUNDC1Q96C34 613 aa23.28■■□□□ 1.32
PRDM1-202ENST00000369091 AK9Q5TCS8 1911 aa23.28■■□□□ 1.32
PRDM1-202ENST00000369091 IQGAP1P46940 1657 aa23.28■■□□□ 1.32
PRDM1-202ENST00000369091 TRIM27P14373 513 aa23.26■■□□□ 1.31
PRDM1-202ENST00000369091 CSPP1Q1MSJ5 1256 aa23.26■■□□□ 1.31
PRDM1-202ENST00000369091 IQSEC2Q5JU85 1478 aa23.25■■□□□ 1.31
PRDM1-202ENST00000369091 UTP14CQ5TAP6 766 aaKnown RBP23.25■■□□□ 1.31
PRDM1-202ENST00000369091 CLEC17AQ6ZS10 378 aa23.25■■□□□ 1.31
PRDM1-202ENST00000369091 WDR63Q8IWG1 891 aa23.25■■□□□ 1.31
PRDM1-202ENST00000369091 TSR2Q969E8 191 aaKnown RBP23.25■■□□□ 1.31
PRDM1-202ENST00000369091 PHF23Q9BUL5 403 aaPredicted RBP23.25■■□□□ 1.31
PRDM1-202ENST00000369091 LMBRD1Q9NUN5 540 aa23.25■■□□□ 1.31
PRDM1-202ENST00000369091 FBLN2P98095 1184 aa23.24■■□□□ 1.31
PRDM1-202ENST00000369091 PKP1Q13835 747 aa23.24■■□□□ 1.31
PRDM1-202ENST00000369091 SMC4Q9NTJ3 1288 aa23.24■■□□□ 1.31
PRDM1-202ENST00000369091 POLR3AO14802 1390 aaPredicted RBP23.24■■□□□ 1.31
PRDM1-202ENST00000369091 SCAF11Q99590 1463 aaKnown RBP23.22■■□□□ 1.31
PRDM1-202ENST00000369091 PLEKHD1A6NEE1 506 aa23.22■■□□□ 1.31
PRDM1-202ENST00000369091 NUCB1Q02818 461 aa23.22■■□□□ 1.31
PRDM1-202ENST00000369091 SHPRHQ149N8 1683 aa23.21■■□□□ 1.31
PRDM1-202ENST00000369091 CBX1P83916 185 aa23.21■■□□□ 1.31
PRDM1-202ENST00000369091 CHAMP1Q96JM3 812 aa23.21■■□□□ 1.31
PRDM1-202ENST00000369091 MADDQ8WXG6 1647 aa23.2■■□□□ 1.3
PRDM1-202ENST00000369091 GPT2Q8TD30 523 aa23.2■■□□□ 1.3
PRDM1-202ENST00000369091 DDX19BQ9UMR2 479 aa23.2■■□□□ 1.3
PRDM1-202ENST00000369091 TMEM57Q8N5G2 664 aa23.19■■□□□ 1.3
PRDM1-202ENST00000369091 TBC1D9Q6ZT07 1266 aa23.19■■□□□ 1.3
PRDM1-202ENST00000369091 ZNF710Q8N1W2 664 aa23.19■■□□□ 1.3
PRDM1-202ENST00000369091 CCDC39Q9UFE4 941 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms