RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 CD2BP2O95400 341 aaKnown RBP23.47■■□□□ 1.35
PRDM1-202ENST00000369091 SMAP1Q8IYB5 467 aaPredicted RBP23.47■■□□□ 1.35
PRDM1-202ENST00000369091 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.47■■□□□ 1.35
PRDM1-202ENST00000369091 CIZ1Q9ULV3 898 aaPredicted RBP23.46■■□□□ 1.35
PRDM1-202ENST00000369091 SHANK2Q9UPX8 1470 aa23.46■■□□□ 1.35
PRDM1-202ENST00000369091 HNRNPMP52272 730 aaKnown RBP eCLIP23.46■■□□□ 1.35
PRDM1-202ENST00000369091 SNX21Q969T3 373 aa23.46■■□□□ 1.35
PRDM1-202ENST00000369091 MYO5CQ9NQX4 1742 aa23.45■■□□□ 1.35
PRDM1-202ENST00000369091 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.45■■□□□ 1.34
PRDM1-202ENST00000369091 DDX49Q9Y6V7 483 aaKnown RBP23.45■■□□□ 1.34
PRDM1-202ENST00000369091 MVPQ14764 893 aaKnown RBP23.43■■□□□ 1.34
PRDM1-202ENST00000369091 RBM25P49756 843 aaKnown RBP23.43■■□□□ 1.34
PRDM1-202ENST00000369091 EIF2AK4Q9P2K8 1649 aaKnown RBP23.42■■□□□ 1.34
PRDM1-202ENST00000369091 CCDC141Q6ZP82 1450 aa23.42■■□□□ 1.34
PRDM1-202ENST00000369091 SYNMO15061 1565 aa23.42■■□□□ 1.34
PRDM1-202ENST00000369091 PBRM1Q86U86 1689 aa23.42■■□□□ 1.34
PRDM1-202ENST00000369091 ADAMTS12P58397 1594 aa23.41■■□□□ 1.34
PRDM1-202ENST00000369091 NOL7Q9UMY1 257 aaKnown RBP23.41■■□□□ 1.34
PRDM1-202ENST00000369091 ZNF500O60304 480 aaPredicted RBP23.4■■□□□ 1.34
PRDM1-202ENST00000369091 PTMSP20962 102 aa23.4■■□□□ 1.34
PRDM1-202ENST00000369091 PLB1Q6P1J6 1458 aa23.39■■□□□ 1.34
PRDM1-202ENST00000369091 NCLP19338 710 aaKnown RBP23.39■■□□□ 1.33
PRDM1-202ENST00000369091 KLHL40Q2TBA0 621 aa23.39■■□□□ 1.33
PRDM1-202ENST00000369091 RBM42Q9BTD8 480 aaKnown RBP23.39■■□□□ 1.33
PRDM1-202ENST00000369091 FGD1P98174 961 aa23.38■■□□□ 1.33
PRDM1-202ENST00000369091 KIF2CQ99661 725 aa23.38■■□□□ 1.33
PRDM1-202ENST00000369091 RBSNQ9H1K0 784 aa23.38■■□□□ 1.33
PRDM1-202ENST00000369091 FTSJ3Q8IY81 847 aaKnown RBP23.38■■□□□ 1.33
PRDM1-202ENST00000369091 TARBP1Q13395 1621 aaKnown RBP23.37■■□□□ 1.33
PRDM1-202ENST00000369091 CAVIN1Q6NZI2 390 aaKnown RBP23.37■■□□□ 1.33
PRDM1-202ENST00000369091 SCAPERQ9BY12 1400 aa23.37■■□□□ 1.33
PRDM1-202ENST00000369091 BAG4O95429 457 aaKnown RBP23.37■■□□□ 1.33
PRDM1-202ENST00000369091 GAS2L2Q8NHY3 880 aa23.37■■□□□ 1.33
PRDM1-202ENST00000369091 RNF17Q9BXT8 1623 aaKnown RBP23.37■■□□□ 1.33
PRDM1-202ENST00000369091 NGEFQ8N5V2 710 aa23.36■■□□□ 1.33
PRDM1-202ENST00000369091 IFT140Q96RY7 1462 aa23.36■■□□□ 1.33
PRDM1-202ENST00000369091 NUP160Q12769 1436 aa23.36■■□□□ 1.33
PRDM1-202ENST00000369091 GOLGA6L22H0YM25 854 aa23.36■■□□□ 1.33
PRDM1-202ENST00000369091 DYNC1I1O14576 645 aa23.36■■□□□ 1.33
PRDM1-202ENST00000369091 ZBTB7CA1YPR0 619 aa23.35■■□□□ 1.33
PRDM1-202ENST00000369091 MYOM1P52179 1685 aa23.35■■□□□ 1.33
PRDM1-202ENST00000369091 IBTKQ9P2D0 1353 aaPredicted RBP23.34■■□□□ 1.33
PRDM1-202ENST00000369091 JARID2Q92833 1246 aaPredicted RBP23.34■■□□□ 1.33
PRDM1-202ENST00000369091 NPC1L1Q9UHC9 1359 aa23.34■■□□□ 1.33
PRDM1-202ENST00000369091 ZSCAN23Q3MJ62 389 aa23.34■■□□□ 1.33
PRDM1-202ENST00000369091 DZIP1LQ8IYY4 767 aaKnown RBP23.34■■□□□ 1.33
PRDM1-202ENST00000369091 TCP11L2Q8N4U5 519 aa23.34■■□□□ 1.33
PRDM1-202ENST00000369091 SYNJ2O15056 1496 aa23.34■■□□□ 1.33
PRDM1-202ENST00000369091 K7ELQ4 463 aaPredicted RBP23.33■■□□□ 1.33
PRDM1-202ENST00000369091 HS1BP3Q53T59 392 aa23.33■■□□□ 1.33
PRDM1-202ENST00000369091 MCTP1Q6DN14 999 aa23.33■■□□□ 1.33
PRDM1-202ENST00000369091 ZNF445P59923 1031 aa23.32■■□□□ 1.32
PRDM1-202ENST00000369091 PDLIM2Q96JY6 352 aa23.32■■□□□ 1.32
PRDM1-202ENST00000369091 ZKSCAN5Q9Y2L8 839 aa23.32■■□□□ 1.32
PRDM1-202ENST00000369091 DMTNQ08495 405 aa23.32■■□□□ 1.32
PRDM1-202ENST00000369091 CDCA8Q53HL2 280 aa23.32■■□□□ 1.32
PRDM1-202ENST00000369091 ZKSCAN2Q63HK3 967 aa23.32■■□□□ 1.32
PRDM1-202ENST00000369091 PRIM1P49642 420 aaKnown RBP23.31■■□□□ 1.32
PRDM1-202ENST00000369091 MTERF4Q7Z6M4 381 aaKnown RBP23.31■■□□□ 1.32
PRDM1-202ENST00000369091 LNPKQ9C0E8 428 aa23.31■■□□□ 1.32
PRDM1-202ENST00000369091 TNNT2P45379 298 aaPredicted RBP23.3■■□□□ 1.32
PRDM1-202ENST00000369091 ITPRIPQ8IWB1 547 aa23.3■■□□□ 1.32
PRDM1-202ENST00000369091 CARD14Q9BXL6 1004 aa23.3■■□□□ 1.32
PRDM1-202ENST00000369091 HDAC1Q13547 482 aaPredicted RBP23.3■■□□□ 1.32
PRDM1-202ENST00000369091 SASS6Q6UVJ0 657 aa23.3■■□□□ 1.32
PRDM1-202ENST00000369091 RBM27Q9P2N5 1060 aaKnown RBP23.29■■□□□ 1.32
PRDM1-202ENST00000369091 SHROOM2Q13796 1616 aa23.29■■□□□ 1.32
PRDM1-202ENST00000369091 CCDC94Q9BW85 323 aaPredicted RBP23.29■■□□□ 1.32
PRDM1-202ENST00000369091 GRIN2AQ12879 1464 aa23.29■■□□□ 1.32
PRDM1-202ENST00000369091 ZSCAN20P17040 1043 aaPredicted RBP23.29■■□□□ 1.32
PRDM1-202ENST00000369091 TSC1Q92574 1164 aa23.28■■□□□ 1.32
PRDM1-202ENST00000369091 RUNDC1Q96C34 613 aa23.28■■□□□ 1.32
PRDM1-202ENST00000369091 AK9Q5TCS8 1911 aa23.28■■□□□ 1.32
PRDM1-202ENST00000369091 IQGAP1P46940 1657 aa23.28■■□□□ 1.32
PRDM1-202ENST00000369091 TRIM27P14373 513 aa23.26■■□□□ 1.31
PRDM1-202ENST00000369091 CSPP1Q1MSJ5 1256 aa23.26■■□□□ 1.31
PRDM1-202ENST00000369091 IQSEC2Q5JU85 1478 aa23.25■■□□□ 1.31
PRDM1-202ENST00000369091 UTP14CQ5TAP6 766 aaKnown RBP23.25■■□□□ 1.31
PRDM1-202ENST00000369091 CLEC17AQ6ZS10 378 aa23.25■■□□□ 1.31
PRDM1-202ENST00000369091 WDR63Q8IWG1 891 aa23.25■■□□□ 1.31
PRDM1-202ENST00000369091 TSR2Q969E8 191 aaKnown RBP23.25■■□□□ 1.31
PRDM1-202ENST00000369091 PHF23Q9BUL5 403 aaPredicted RBP23.25■■□□□ 1.31
PRDM1-202ENST00000369091 LMBRD1Q9NUN5 540 aa23.25■■□□□ 1.31
PRDM1-202ENST00000369091 FBLN2P98095 1184 aa23.24■■□□□ 1.31
PRDM1-202ENST00000369091 PKP1Q13835 747 aa23.24■■□□□ 1.31
PRDM1-202ENST00000369091 SMC4Q9NTJ3 1288 aa23.24■■□□□ 1.31
PRDM1-202ENST00000369091 POLR3AO14802 1390 aaPredicted RBP23.24■■□□□ 1.31
PRDM1-202ENST00000369091 SCAF11Q99590 1463 aaKnown RBP23.22■■□□□ 1.31
PRDM1-202ENST00000369091 PLEKHD1A6NEE1 506 aa23.22■■□□□ 1.31
PRDM1-202ENST00000369091 NUCB1Q02818 461 aa23.22■■□□□ 1.31
PRDM1-202ENST00000369091 SHPRHQ149N8 1683 aa23.21■■□□□ 1.31
PRDM1-202ENST00000369091 CBX1P83916 185 aa23.21■■□□□ 1.31
PRDM1-202ENST00000369091 CHAMP1Q96JM3 812 aa23.21■■□□□ 1.31
PRDM1-202ENST00000369091 MADDQ8WXG6 1647 aa23.2■■□□□ 1.3
PRDM1-202ENST00000369091 GPT2Q8TD30 523 aa23.2■■□□□ 1.3
PRDM1-202ENST00000369091 DDX19BQ9UMR2 479 aa23.2■■□□□ 1.3
PRDM1-202ENST00000369091 TMEM57Q8N5G2 664 aa23.19■■□□□ 1.3
PRDM1-202ENST00000369091 TBC1D9Q6ZT07 1266 aa23.19■■□□□ 1.3
PRDM1-202ENST00000369091 ZNF710Q8N1W2 664 aa23.19■■□□□ 1.3
PRDM1-202ENST00000369091 CCDC39Q9UFE4 941 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms