RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 C10orf67Q8IYJ2 551 aa12.58□□□□□ -0.4
PRDM1-201ENST00000369089 NINLQ9Y2I6 1382 aa12.58□□□□□ -0.4
PRDM1-201ENST00000369089 FAM107BQ9H098 131 aa12.58□□□□□ -0.4
PRDM1-201ENST00000369089 FOXD4L5Q5VV16 416 aaPredicted RBP12.57□□□□□ -0.4
PRDM1-201ENST00000369089 ANKRD20A12PQ8NF67 263 aa12.57□□□□□ -0.4
PRDM1-201ENST00000369089 MYRIPQ8NFW9 859 aa12.57□□□□□ -0.4
PRDM1-201ENST00000369089 FOXD4L4Q8WXT5 416 aaPredicted RBP12.57□□□□□ -0.4
PRDM1-201ENST00000369089 CFAP53Q96M91 514 aa12.57□□□□□ -0.4
PRDM1-201ENST00000369089 FBXO3Q9UK99 471 aa12.57□□□□□ -0.4
PRDM1-201ENST00000369089 GOLGA2Q08379 1002 aa12.57□□□□□ -0.4
PRDM1-201ENST00000369089 LRCH2Q5VUJ6 765 aa12.57□□□□□ -0.4
PRDM1-201ENST00000369089 SMC4Q9NTJ3 1288 aa12.57□□□□□ -0.4
PRDM1-201ENST00000369089 PTPRGP23470 1445 aa12.57□□□□□ -0.4
PRDM1-201ENST00000369089 ARID4AP29374 1257 aaPredicted RBP12.57□□□□□ -0.4
PRDM1-201ENST00000369089 BMS1Q14692 1282 aaKnown RBP12.57□□□□□ -0.4
PRDM1-201ENST00000369089 NOL7Q9UMY1 257 aaKnown RBP12.57□□□□□ -0.4
PRDM1-201ENST00000369089 NPHP1O15259 732 aa12.56□□□□□ -0.4
PRDM1-201ENST00000369089 LIG1P18858 919 aa12.56□□□□□ -0.4
PRDM1-201ENST00000369089 HOMER1Q86YM7 354 aa12.56□□□□□ -0.4
PRDM1-201ENST00000369089 PHLDB1Q86UU1 1377 aa12.56□□□□□ -0.4
PRDM1-201ENST00000369089 PRXQ9BXM0 1461 aa12.56□□□□□ -0.4
PRDM1-201ENST00000369089 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.56□□□□□ -0.4
PRDM1-201ENST00000369089 MPNDQ8N594 471 aa12.56□□□□□ -0.4
PRDM1-201ENST00000369089 ERICH3Q5RHP9 1530 aa12.55□□□□□ -0.4
PRDM1-201ENST00000369089 GOLGA6L19H0YKK7 550 aa12.55□□□□□ -0.4
PRDM1-201ENST00000369089 ARAP1Q96P48 1450 aa12.55□□□□□ -0.4
PRDM1-201ENST00000369089 CDR1P51861 262 aa12.55□□□□□ -0.4
PRDM1-201ENST00000369089 FAM184AQ8NB25 1140 aa12.55□□□□□ -0.4
PRDM1-201ENST00000369089 DRC1Q96MC2 740 aa12.55□□□□□ -0.4
PRDM1-201ENST00000369089 PRPF40AO75400 957 aaKnown RBP12.55□□□□□ -0.4
PRDM1-201ENST00000369089 NLRP13Q86W25 1043 aa12.55□□□□□ -0.4
PRDM1-201ENST00000369089 TMX1Q9H3N1 280 aa12.55□□□□□ -0.4
PRDM1-201ENST00000369089 TTLL5Q6EMB2 1281 aa12.54□□□□□ -0.4
PRDM1-201ENST00000369089 TMCO3Q6UWJ1 677 aa12.54□□□□□ -0.4
PRDM1-201ENST00000369089 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.54□□□□□ -0.4
PRDM1-201ENST00000369089 CUX1P39880 1505 aa12.54□□□□□ -0.4
PRDM1-201ENST00000369089 KIF3BO15066 747 aa12.54□□□□□ -0.4
PRDM1-201ENST00000369089 TOP2BQ02880 1626 aa12.54□□□□□ -0.4
PRDM1-201ENST00000369089 NEFHP12036 1026 aa12.54□□□□□ -0.4
PRDM1-201ENST00000369089 DDX11Q96FC9 970 aa12.54□□□□□ -0.4
PRDM1-201ENST00000369089 ZBTB12Q9Y330 459 aaPredicted RBP12.54□□□□□ -0.4
PRDM1-201ENST00000369089 CC2D2AQ9P2K1 1620 aa12.54□□□□□ -0.4
PRDM1-201ENST00000369089 RABEP1Q15276 862 aa12.53□□□□□ -0.4
PRDM1-201ENST00000369089 NOLC1Q14978 699 aaKnown RBP eCLIP12.53□□□□□ -0.4
PRDM1-201ENST00000369089 PES1O00541 588 aaKnown RBP12.53□□□□□ -0.4
PRDM1-201ENST00000369089 POLR3GO15318 223 aaPredicted RBP12.53□□□□□ -0.4
PRDM1-201ENST00000369089 MLECQ14165 292 aa12.53□□□□□ -0.4
PRDM1-201ENST00000369089 SPAG9O60271 1321 aaKnown RBP12.53□□□□□ -0.4
PRDM1-201ENST00000369089 VGFO15240 615 aaPredicted RBP12.53□□□□□ -0.4
PRDM1-201ENST00000369089 TPM1P09493 284 aa12.53□□□□□ -0.4
PRDM1-201ENST00000369089 CNTLNQ9NXG0 1405 aa12.53□□□□□ -0.4
PRDM1-201ENST00000369089 KIAA0754O94854 1291 aa12.52□□□□□ -0.4
PRDM1-201ENST00000369089 IVLP07476 585 aa12.52□□□□□ -0.4
PRDM1-201ENST00000369089 CCDC191Q8NCU4 936 aa12.52□□□□□ -0.4
PRDM1-201ENST00000369089 TBC1D2Q9BYX2 928 aa12.52□□□□□ -0.4
PRDM1-201ENST00000369089 U2AF2P26368 475 aaKnown RBP eCLIP12.52□□□□□ -0.41
PRDM1-201ENST00000369089 NEUROD2Q15784 382 aa12.52□□□□□ -0.41
PRDM1-201ENST00000369089 TMEM51Q9NW97 253 aa12.52□□□□□ -0.41
PRDM1-201ENST00000369089 ATP6V1DQ9Y5K8 247 aa12.52□□□□□ -0.41
PRDM1-201ENST00000369089 LRRC9Q6ZRR7 1453 aa12.51□□□□□ -0.41
PRDM1-201ENST00000369089 SOX12O15370 315 aa12.51□□□□□ -0.41
PRDM1-201ENST00000369089 ATP6V1AP38606 617 aa12.51□□□□□ -0.41
PRDM1-201ENST00000369089 RGS22Q8NE09 1264 aa12.51□□□□□ -0.41
PRDM1-201ENST00000369089 FGD6Q6ZV73 1430 aa12.51□□□□□ -0.41
PRDM1-201ENST00000369089 STK11IPQ8N1F8 1099 aa12.51□□□□□ -0.41
PRDM1-201ENST00000369089 ERCC4Q92889 916 aaPredicted RBP12.51□□□□□ -0.41
PRDM1-201ENST00000369089 EIF3JO75822 258 aaKnown RBP12.5□□□□□ -0.41
PRDM1-201ENST00000369089 NF2P35240 595 aa12.5□□□□□ -0.41
PRDM1-201ENST00000369089 BRMS1Q9HCU9 246 aa12.5□□□□□ -0.41
PRDM1-201ENST00000369089 CPSF2Q9P2I0 782 aaKnown RBP12.5□□□□□ -0.41
PRDM1-201ENST00000369089 ROCK2O75116 1388 aaKnown RBP12.5□□□□□ -0.41
PRDM1-201ENST00000369089 MYBBP1AQ9BQG0 1328 aaKnown RBP12.5□□□□□ -0.41
PRDM1-201ENST00000369089 MYCNP04198 464 aaPredicted RBP12.5□□□□□ -0.41
PRDM1-201ENST00000369089 MAP2K2P36507 400 aa12.5□□□□□ -0.41
PRDM1-201ENST00000369089 IRX5P78411 483 aaPredicted RBP12.5□□□□□ -0.41
PRDM1-201ENST00000369089 SETSIPP0DME0 302 aa12.5□□□□□ -0.41
PRDM1-201ENST00000369089 TOPBP1Q92547 1522 aa12.5□□□□□ -0.41
PRDM1-201ENST00000369089 EIF3AQ14152 1382 aaKnown RBP12.5□□□□□ -0.41
PRDM1-201ENST00000369089 ZNF500O60304 480 aaPredicted RBP12.49□□□□□ -0.41
PRDM1-201ENST00000369089 SPC24Q8NBT2 197 aa12.49□□□□□ -0.41
PRDM1-201ENST00000369089 CASKIN1Q8WXD9 1431 aa12.49□□□□□ -0.41
PRDM1-201ENST00000369089 BECN2A8MW95 431 aa12.49□□□□□ -0.41
PRDM1-201ENST00000369089 KLHL40Q2TBA0 621 aa12.49□□□□□ -0.41
PRDM1-201ENST00000369089 POLA1P09884 1462 aaPredicted RBP12.49□□□□□ -0.41
PRDM1-201ENST00000369089 ZNF644Q9H582 1327 aaPredicted RBP12.49□□□□□ -0.41
PRDM1-201ENST00000369089 MYOM3Q5VTT5 1437 aa12.49□□□□□ -0.41
PRDM1-201ENST00000369089 KIF2AO00139 706 aaPredicted RBP12.49□□□□□ -0.41
PRDM1-201ENST00000369089 TNPO1Q92973 898 aaKnown RBP12.49□□□□□ -0.41
PRDM1-201ENST00000369089 RIPK4P57078 832 aa12.48□□□□□ -0.41
PRDM1-201ENST00000369089 GRIN2BQ13224 1484 aa12.48□□□□□ -0.41
PRDM1-201ENST00000369089 RPAINQ86UA6 219 aa12.48□□□□□ -0.41
PRDM1-201ENST00000369089 FSD2A1L4K1 749 aa12.48□□□□□ -0.41
PRDM1-201ENST00000369089 RTF1Q92541 710 aaKnown RBP12.47□□□□□ -0.41
PRDM1-201ENST00000369089 PAXBP1Q9Y5B6 917 aa12.47□□□□□ -0.41
PRDM1-201ENST00000369089 TMCO5BA8MYB1 307 aa12.47□□□□□ -0.41
PRDM1-201ENST00000369089 LMAN1P49257 510 aa12.47□□□□□ -0.41
PRDM1-201ENST00000369089 SAFB2Q14151 953 aaKnown RBP eCLIP12.47□□□□□ -0.41
PRDM1-201ENST00000369089 FILIP1Q7Z7B0 1213 aa12.47□□□□□ -0.41
PRDM1-201ENST00000369089 ZNF397Q8NF99 534 aaPredicted RBP12.47□□□□□ -0.41
PRDM1-201ENST00000369089 UBXN4Q92575 508 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms