RNA–Protein interactions for RNA: ENST00000369047.8

ECM1-202, Transcript of extracellular matrix protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ECM1, Length 2,070 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-202ENST00000369047 MED14O60244 1454 aa17.56■□□□□ 0.4
ECM1-202ENST00000369047 TXNDC2Q86VQ3 553 aa17.56■□□□□ 0.4
ECM1-202ENST00000369047 PIK3C2GO75747 1445 aa17.56■□□□□ 0.4
ECM1-202ENST00000369047 ZFYVE9O95405 1425 aa17.55■□□□□ 0.4
ECM1-202ENST00000369047 NPHP4O75161 1426 aaPredicted RBP17.54■□□□□ 0.4
ECM1-202ENST00000369047 PPP2R1AP30153 589 aa17.54■□□□□ 0.4
ECM1-202ENST00000369047 NCKAP5LQ9HCH0 1330 aa17.54■□□□□ 0.4
ECM1-202ENST00000369047 CENPJQ9HC77 1338 aaPredicted RBP17.53■□□□□ 0.4
ECM1-202ENST00000369047 VGFO15240 615 aaPredicted RBP17.52■□□□□ 0.4
ECM1-202ENST00000369047 NEXMIFQ5QGS0 1516 aa17.52■□□□□ 0.39
ECM1-202ENST00000369047 PLEKHG1Q9ULL1 1385 aa17.51■□□□□ 0.39
ECM1-202ENST00000369047 RBM19Q9Y4C8 960 aaKnown RBP17.51■□□□□ 0.39
ECM1-202ENST00000369047 ADGRB1O14514 1584 aa17.49■□□□□ 0.39
ECM1-202ENST00000369047 PUS7Q96PZ0 661 aaKnown RBP17.49■□□□□ 0.39
ECM1-202ENST00000369047 LTKP29376 864 aa17.49■□□□□ 0.39
ECM1-202ENST00000369047 DIP2AQ14689 1571 aa17.48■□□□□ 0.39
ECM1-202ENST00000369047 WDR43Q15061 677 aaKnown RBP eCLIP17.48■□□□□ 0.39
ECM1-202ENST00000369047 RCAN3Q9UKA8 241 aa17.48■□□□□ 0.39
ECM1-202ENST00000369047 B4GALNT3Q6L9W6 998 aa17.47■□□□□ 0.39
ECM1-202ENST00000369047 ADAMTS8Q9UP79 889 aa17.47■□□□□ 0.39
ECM1-202ENST00000369047 QRICH2Q9H0J4 1663 aa17.45■□□□□ 0.38
ECM1-202ENST00000369047 TRAK1Q9UPV9 953 aa17.44■□□□□ 0.38
ECM1-202ENST00000369047 SENP3-EIF4A1A0A087X0R7 540 aa17.44■□□□□ 0.38
ECM1-202ENST00000369047 RRP1P56182 461 aaKnown RBP17.44■□□□□ 0.38
ECM1-202ENST00000369047 MYT1Q01538 1121 aa17.43■□□□□ 0.38
ECM1-202ENST00000369047 CARD14Q9BXL6 1004 aa17.43■□□□□ 0.38
ECM1-202ENST00000369047 SALL2Q9Y467 1007 aaPredicted RBP17.43■□□□□ 0.38
ECM1-202ENST00000369047 CCDC136Q96JN2 1154 aa17.42■□□□□ 0.38
ECM1-202ENST00000369047 NGEFQ8N5V2 710 aa17.41■□□□□ 0.38
ECM1-202ENST00000369047 TBX22Q9Y458 520 aa17.41■□□□□ 0.38
ECM1-202ENST00000369047 PIK3R4Q99570 1358 aa17.41■□□□□ 0.38
ECM1-202ENST00000369047 NUTM2DQ5VT03 806 aaPredicted RBP17.4■□□□□ 0.38
ECM1-202ENST00000369047 TMEM132EQ6IEE7 984 aa17.4■□□□□ 0.38
ECM1-202ENST00000369047 CDCA7LQ96GN5 454 aa17.4■□□□□ 0.38
ECM1-202ENST00000369047 EVC2Q86UK5 1308 aa17.38■□□□□ 0.37
ECM1-202ENST00000369047 NRXN3Q9Y4C0 1643 aa17.38■□□□□ 0.37
ECM1-202ENST00000369047 ADAMTS13Q76LX8 1427 aa17.38■□□□□ 0.37
ECM1-202ENST00000369047 CPS1P31327 1500 aa17.37■□□□□ 0.37
ECM1-202ENST00000369047 ARHGEF28Q8N1W1 1705 aaKnown RBP17.37■□□□□ 0.37
ECM1-202ENST00000369047 USP32Q8NFA0 1604 aa17.37■□□□□ 0.37
ECM1-202ENST00000369047 POLR3AO14802 1390 aaPredicted RBP17.37■□□□□ 0.37
ECM1-202ENST00000369047 ZNF521Q96K83 1311 aa17.36■□□□□ 0.37
ECM1-202ENST00000369047 SLC26A8Q96RN1 970 aa17.35■□□□□ 0.37
ECM1-202ENST00000369047 ALKQ9UM73 1620 aa17.35■□□□□ 0.37
ECM1-202ENST00000369047 NWD1Q149M9 1564 aa17.35■□□□□ 0.37
ECM1-202ENST00000369047 FANCIQ9NVI1 1328 aa17.35■□□□□ 0.37
ECM1-202ENST00000369047 GOLGA2Q08379 1002 aa17.35■□□□□ 0.37
ECM1-202ENST00000369047 SLC12A5Q9H2X9 1139 aa17.34■□□□□ 0.37
ECM1-202ENST00000369047 NSD3Q9BZ95 1437 aa17.33■□□□□ 0.37
ECM1-202ENST00000369047 KCNA6P17658 529 aa17.33■□□□□ 0.37
ECM1-202ENST00000369047 NINLQ9Y2I6 1382 aa17.33■□□□□ 0.37
ECM1-202ENST00000369047 MORC1Q86VD1 984 aa17.33■□□□□ 0.36
ECM1-202ENST00000369047 NKTRP30414 1462 aaKnown RBP17.33■□□□□ 0.36
ECM1-202ENST00000369047 CHD2O14647 1828 aaKnown RBP17.33■□□□□ 0.36
ECM1-202ENST00000369047 CGNL1Q0VF96 1302 aa17.32■□□□□ 0.36
ECM1-202ENST00000369047 SETD1AO15047 1707 aaKnown RBP17.32■□□□□ 0.36
ECM1-202ENST00000369047 NSD2O96028 1365 aa17.32■□□□□ 0.36
ECM1-202ENST00000369047 PLEKHH1Q9ULM0 1364 aa17.32■□□□□ 0.36
ECM1-202ENST00000369047 ZNF335Q9H4Z2 1342 aaPredicted RBP17.31■□□□□ 0.36
ECM1-202ENST00000369047 ANKRD36BQ8N2N9 1353 aa17.31■□□□□ 0.36
ECM1-202ENST00000369047 LTBP4Q8N2S1 1624 aa17.31■□□□□ 0.36
ECM1-202ENST00000369047 IQSEC2Q5JU85 1478 aa17.3■□□□□ 0.36
ECM1-202ENST00000369047 DUSP27Q5VZP5 1158 aa17.3■□□□□ 0.36
ECM1-202ENST00000369047 TULP4Q9NRJ4 1543 aa17.3■□□□□ 0.36
ECM1-202ENST00000369047 EXOC6Q8TAG9 804 aa17.3■□□□□ 0.36
ECM1-202ENST00000369047 SLFN5Q08AF3 891 aa17.29■□□□□ 0.36
ECM1-202ENST00000369047 TRMT2AQ8IZ69 625 aaKnown RBP17.29■□□□□ 0.36
ECM1-202ENST00000369047 XRN1Q8IZH2 1706 aaKnown RBP17.28■□□□□ 0.36
ECM1-202ENST00000369047 SENP3Q9H4L4 574 aaPredicted RBP17.27■□□□□ 0.36
ECM1-202ENST00000369047 METP08581 1390 aa17.26■□□□□ 0.35
ECM1-202ENST00000369047 APAF1O14727 1248 aa17.26■□□□□ 0.35
ECM1-202ENST00000369047 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.26■□□□□ 0.35
ECM1-202ENST00000369047 STRCP1A6NGW2 1772 aa17.26■□□□□ 0.35
ECM1-202ENST00000369047 YTHDC2Q9H6S0 1430 aaKnown RBP17.26■□□□□ 0.35
ECM1-202ENST00000369047 CFAP53Q96M91 514 aa17.25■□□□□ 0.35
ECM1-202ENST00000369047 AMOTL2Q9Y2J4 779 aa17.25■□□□□ 0.35
ECM1-202ENST00000369047 KNDC1Q76NI1 1749 aa17.25■□□□□ 0.35
ECM1-202ENST00000369047 NCOA3Q9Y6Q9 1424 aa17.25■□□□□ 0.35
ECM1-202ENST00000369047 E9PSI1 815 aa17.25■□□□□ 0.35
ECM1-202ENST00000369047 ATAD2Q6PL18 1390 aa17.25■□□□□ 0.35
ECM1-202ENST00000369047 CCDC146Q8IYE0 955 aa17.24■□□□□ 0.35
ECM1-202ENST00000369047 PTCH1Q13635 1447 aa17.24■□□□□ 0.35
ECM1-202ENST00000369047 NCBP3Q53F19 620 aaKnown RBP17.24■□□□□ 0.35
ECM1-202ENST00000369047 LRRC7Q96NW7 1537 aa17.23■□□□□ 0.35
ECM1-202ENST00000369047 PTPRUQ92729 1446 aa17.23■□□□□ 0.35
ECM1-202ENST00000369047 CERKQ8TCT0 537 aa17.23■□□□□ 0.35
ECM1-202ENST00000369047 CABP2Q9NPB3 220 aa17.23■□□□□ 0.35
ECM1-202ENST00000369047 STK26Q9P289 416 aa17.23■□□□□ 0.35
ECM1-202ENST00000369047 TECPR2O15040 1411 aa17.22■□□□□ 0.35
ECM1-202ENST00000369047 PROSER2Q86WR7 435 aaPredicted RBP17.22■□□□□ 0.35
ECM1-202ENST00000369047 POGKQ9P215 609 aa17.22■□□□□ 0.35
ECM1-202ENST00000369047 SHPRHQ149N8 1683 aa17.22■□□□□ 0.35
ECM1-202ENST00000369047 ABCC11Q96J66 1382 aa17.22■□□□□ 0.35
ECM1-202ENST00000369047 ANP32EQ9BTT0 268 aa17.22■□□□□ 0.35
ECM1-202ENST00000369047 TERF2IPQ9NYB0 399 aa17.22■□□□□ 0.35
ECM1-202ENST00000369047 SRPK2P78362 688 aaKnown RBP17.21■□□□□ 0.35
ECM1-202ENST00000369047 RUNDC1Q96C34 613 aa17.21■□□□□ 0.35
ECM1-202ENST00000369047 SIRT1Q96EB6 747 aa17.2■□□□□ 0.34
ECM1-202ENST00000369047 PRAM1Q96QH2 718 aa17.2■□□□□ 0.34
ECM1-202ENST00000369047 DLC1Q96QB1 1528 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms