RNA–Protein interactions for RNA: ENST00000368905.8

SCNM1-202, Transcript of sodium channel modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCNM1, Length 2,016 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-202ENST00000368905 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.94□□□□□ -0.34
SCNM1-202ENST00000368905 ARHGEF12Q9NZN5 1544 aa12.94□□□□□ -0.34
SCNM1-202ENST00000368905 CNTLNQ9NXG0 1405 aa12.94□□□□□ -0.34
SCNM1-202ENST00000368905 RIOK3O14730 519 aaKnown RBP12.94□□□□□ -0.34
SCNM1-202ENST00000368905 CCDC97Q96F63 343 aaPredicted RBP12.94□□□□□ -0.34
SCNM1-202ENST00000368905 POLR1AO95602 1720 aaPredicted RBP12.94□□□□□ -0.34
SCNM1-202ENST00000368905 ASXL2Q76L83 1435 aa12.93□□□□□ -0.34
SCNM1-202ENST00000368905 NBPF8Q3BBV2 869 aa12.93□□□□□ -0.34
SCNM1-202ENST00000368905 KCNH8Q96L42 1107 aa12.93□□□□□ -0.34
SCNM1-202ENST00000368905 CCDC7Q96M83 1385 aa12.93□□□□□ -0.34
SCNM1-202ENST00000368905 TTC37Q6PGP7 1564 aa12.93□□□□□ -0.34
SCNM1-202ENST00000368905 VGFO15240 615 aaPredicted RBP12.93□□□□□ -0.34
SCNM1-202ENST00000368905 RINLQ6ZS11 566 aa12.93□□□□□ -0.34
SCNM1-202ENST00000368905 TSHZ1Q6ZSZ6 1077 aa12.93□□□□□ -0.34
SCNM1-202ENST00000368905 SERPINA10Q9UK55 444 aa12.93□□□□□ -0.34
SCNM1-202ENST00000368905 WDR7Q9Y4E6 1490 aa12.93□□□□□ -0.34
SCNM1-202ENST00000368905 MYCNP04198 464 aaPredicted RBP12.92□□□□□ -0.34
SCNM1-202ENST00000368905 SYCP2Q9BX26 1530 aa12.92□□□□□ -0.34
SCNM1-202ENST00000368905 SPATA31E1Q6ZUB1 1445 aa12.92□□□□□ -0.34
SCNM1-202ENST00000368905 PLXNC1O60486 1568 aa12.92□□□□□ -0.34
SCNM1-202ENST00000368905 DRC1Q96MC2 740 aa12.91□□□□□ -0.34
SCNM1-202ENST00000368905 UHRF1BP1Q6BDS2 1440 aa12.91□□□□□ -0.34
SCNM1-202ENST00000368905 ZMYND10O75800 440 aa12.91□□□□□ -0.34
SCNM1-202ENST00000368905 EFCAB2Q5VUJ9 269 aa12.91□□□□□ -0.34
SCNM1-202ENST00000368905 KDM4CQ9H3R0 1056 aa12.91□□□□□ -0.34
SCNM1-202ENST00000368905 ARIH1Q9Y4X5 557 aaPredicted RBP12.91□□□□□ -0.34
SCNM1-202ENST00000368905 TESPA1A2RU30 521 aaPredicted RBP12.9□□□□□ -0.34
SCNM1-202ENST00000368905 PLCH2O75038 1416 aa12.9□□□□□ -0.34
SCNM1-202ENST00000368905 FAM135AQ9P2D6 1515 aa12.89□□□□□ -0.35
SCNM1-202ENST00000368905 PROM2Q8N271 834 aa12.89□□□□□ -0.35
SCNM1-202ENST00000368905 UNC13BO14795 1591 aa12.89□□□□□ -0.35
SCNM1-202ENST00000368905 HMGB1P1B2RPK0 211 aaPredicted RBP12.88□□□□□ -0.35
SCNM1-202ENST00000368905 MCCD1P59942 119 aaPredicted RBP12.88□□□□□ -0.35
SCNM1-202ENST00000368905 ARAP3Q8WWN8 1544 aa12.88□□□□□ -0.35
SCNM1-202ENST00000368905 DUOX2Q9NRD8 1548 aa12.88□□□□□ -0.35
SCNM1-202ENST00000368905 RALGAPBQ86X10 1494 aa12.88□□□□□ -0.35
SCNM1-202ENST00000368905 MYBPC2Q14324 1141 aa12.88□□□□□ -0.35
SCNM1-202ENST00000368905 AXDND1Q5T1B0 1012 aaPredicted RBP12.88□□□□□ -0.35
SCNM1-202ENST00000368905 SLC4A2P04920 1241 aa12.87□□□□□ -0.35
SCNM1-202ENST00000368905 MMP14P50281 582 aa12.87□□□□□ -0.35
SCNM1-202ENST00000368905 SUPT16HQ9Y5B9 1047 aaKnown RBP12.87□□□□□ -0.35
SCNM1-202ENST00000368905 USP47Q96K76 1375 aa12.87□□□□□ -0.35
SCNM1-202ENST00000368905 ERBINQ96RT1 1412 aa12.87□□□□□ -0.35
SCNM1-202ENST00000368905 DIP2BQ9P265 1576 aa12.86□□□□□ -0.35
SCNM1-202ENST00000368905 GTPBP6O43824 516 aaPredicted RBP12.86□□□□□ -0.35
SCNM1-202ENST00000368905 STAC3Q96MF2 364 aa12.86□□□□□ -0.35
SCNM1-202ENST00000368905 MTA3Q9BTC8 594 aa12.86□□□□□ -0.35
SCNM1-202ENST00000368905 NKX1-1Q15270 411 aaPredicted RBP12.86□□□□□ -0.35
SCNM1-202ENST00000368905 ONECUT3O60422 494 aaPredicted RBP12.85□□□□□ -0.35
SCNM1-202ENST00000368905 UBA5Q9GZZ9 404 aa12.85□□□□□ -0.35
SCNM1-202ENST00000368905 ROCK2O75116 1388 aaKnown RBP12.85□□□□□ -0.35
SCNM1-202ENST00000368905 CCDC144AA2RUR9 1427 aa12.84□□□□□ -0.35
SCNM1-202ENST00000368905 TTC36A6NLP5 189 aa12.84□□□□□ -0.35
SCNM1-202ENST00000368905 SPDYE4A6NLX3 237 aa12.84□□□□□ -0.35
SCNM1-202ENST00000368905 KIF7Q2M1P5 1343 aa12.84□□□□□ -0.35
SCNM1-202ENST00000368905 MORC4Q8TE76 937 aa12.84□□□□□ -0.35
SCNM1-202ENST00000368905 IQGAP3Q86VI3 1631 aa12.84□□□□□ -0.35
SCNM1-202ENST00000368905 LONRF3Q496Y0 759 aa12.84□□□□□ -0.35
SCNM1-202ENST00000368905 GLI2P10070 1586 aa12.83□□□□□ -0.35
SCNM1-202ENST00000368905 ABCC1P33527 1531 aa12.83□□□□□ -0.35
SCNM1-202ENST00000368905 RAB11FIP3O75154 756 aa12.83□□□□□ -0.36
SCNM1-202ENST00000368905 FOXD4Q12950 439 aaPredicted RBP12.83□□□□□ -0.36
SCNM1-202ENST00000368905 KDM5CP41229 1560 aa12.83□□□□□ -0.36
SCNM1-202ENST00000368905 KIF13AQ9H1H9 1805 aa12.83□□□□□ -0.36
SCNM1-202ENST00000368905 NBPF11Q86T75 865 aa12.83□□□□□ -0.36
SCNM1-202ENST00000368905 EVI5LQ96CN4 794 aa12.83□□□□□ -0.36
SCNM1-202ENST00000368905 PRKRIP1Q9H875 184 aaPredicted RBP12.83□□□□□ -0.36
SCNM1-202ENST00000368905 ABCA9Q8IUA7 1624 aa12.82□□□□□ -0.36
SCNM1-202ENST00000368905 RTEL1-TNFRSF6BF6WH68 1400 aa12.82□□□□□ -0.36
SCNM1-202ENST00000368905 PEX14O75381 377 aa12.82□□□□□ -0.36
SCNM1-202ENST00000368905 CASC1Q6TDU7 716 aa12.82□□□□□ -0.36
SCNM1-202ENST00000368905 SREK1Q8WXA9 508 aaKnown RBP12.82□□□□□ -0.36
SCNM1-202ENST00000368905 CARD11Q9BXL7 1154 aa12.82□□□□□ -0.36
SCNM1-202ENST00000368905 C11orf95C9JLR9 678 aaPredicted RBP12.81□□□□□ -0.36
SCNM1-202ENST00000368905 FAM69CQ0P6D2 419 aa12.81□□□□□ -0.36
SCNM1-202ENST00000368905 KRBA2Q6ZNG9 492 aa12.81□□□□□ -0.36
SCNM1-202ENST00000368905 ZNF662Q6ZS27 426 aa12.81□□□□□ -0.36
SCNM1-202ENST00000368905 RPS6KL1Q9Y6S9 549 aa12.81□□□□□ -0.36
SCNM1-202ENST00000368905 MAGI2Q86UL8 1455 aa12.81□□□□□ -0.36
SCNM1-202ENST00000368905 ATP10AO60312 1499 aa12.8□□□□□ -0.36
SCNM1-202ENST00000368905 FOSBP53539 338 aa12.8□□□□□ -0.36
SCNM1-202ENST00000368905 NBPF1Q3BBV0 1214 aa12.8□□□□□ -0.36
SCNM1-202ENST00000368905 DCAF11Q8TEB1 546 aa12.8□□□□□ -0.36
SCNM1-202ENST00000368905 MAP3K4Q9Y6R4 1608 aa12.8□□□□□ -0.36
SCNM1-202ENST00000368905 PPFIA4O75335 1185 aa12.79□□□□□ -0.36
SCNM1-202ENST00000368905 SPAG9O60271 1321 aaKnown RBP12.78□□□□□ -0.36
SCNM1-202ENST00000368905 HNRNPUQ00839 825 aaKnown RBP eCLIP12.78□□□□□ -0.36
SCNM1-202ENST00000368905 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.78□□□□□ -0.36
SCNM1-202ENST00000368905 CD109Q6YHK3 1445 aa12.77□□□□□ -0.36
SCNM1-202ENST00000368905 KCNA1Q09470 495 aa12.77□□□□□ -0.37
SCNM1-202ENST00000368905 TSR1Q2NL82 804 aaKnown RBP12.77□□□□□ -0.37
SCNM1-202ENST00000368905 SDR16C5Q8N3Y7 309 aa12.77□□□□□ -0.37
SCNM1-202ENST00000368905 EIF2AK4Q9P2K8 1649 aaKnown RBP12.77□□□□□ -0.37
SCNM1-202ENST00000368905 MAP4K4O95819 1239 aaPredicted RBP12.76□□□□□ -0.37
SCNM1-202ENST00000368905 CALRP27797 417 aaKnown RBP12.76□□□□□ -0.37
SCNM1-202ENST00000368905 CDCA8Q53HL2 280 aa12.76□□□□□ -0.37
SCNM1-202ENST00000368905 MRS2Q9HD23 443 aa12.76□□□□□ -0.37
SCNM1-202ENST00000368905 KIAA1522Q9P206 1035 aaPredicted RBP12.76□□□□□ -0.37
SCNM1-202ENST00000368905 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.76□□□□□ -0.37
SCNM1-202ENST00000368905 PRAG1Q86YV5 1406 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms