RNA–Protein interactions for RNA: ENST00000368408.3

EFNA3-201, Transcript of ephrin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNA3, Length 1,782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3-201ENST00000368408 TMEM2Q9UHN6 1383 aa35.08■■■■□ 3.21
EFNA3-201ENST00000368408 ANKRD36BQ8N2N9 1353 aa35.07■■■■□ 3.2
EFNA3-201ENST00000368408 PRAM1Q96QH2 718 aa35.07■■■■□ 3.2
EFNA3-201ENST00000368408 C3P01024 1663 aa35.04■■■■□ 3.2
EFNA3-201ENST00000368408 ATAD2Q6PL18 1390 aa35.04■■■■□ 3.2
EFNA3-201ENST00000368408 POGKQ9P215 609 aa35.03■■■■□ 3.2
EFNA3-201ENST00000368408 NUDCQ9Y266 331 aa35.02■■■■□ 3.2
EFNA3-201ENST00000368408 FER1L4A9Z1Z3 1794 aa35.02■■■■□ 3.2
EFNA3-201ENST00000368408 KNDC1Q76NI1 1749 aa35■■■■□ 3.19
EFNA3-201ENST00000368408 CABP2Q9NPB3 220 aa35■■■■□ 3.19
EFNA3-201ENST00000368408 SIRT1Q96EB6 747 aa34.99■■■■□ 3.19
EFNA3-201ENST00000368408 NSD2O96028 1365 aa34.98■■■■□ 3.19
EFNA3-201ENST00000368408 TECPR2O15040 1411 aa34.98■■■■□ 3.19
EFNA3-201ENST00000368408 SAFB2Q14151 953 aaKnown RBP eCLIP34.97■■■■□ 3.19
EFNA3-201ENST00000368408 SENP3Q9H4L4 574 aaPredicted RBP34.97■■■■□ 3.19
EFNA3-201ENST00000368408 ADAMTSL3P82987 1691 aa34.96■■■■□ 3.19
EFNA3-201ENST00000368408 CGNL1Q0VF96 1302 aa34.95■■■■□ 3.19
EFNA3-201ENST00000368408 PDE3BQ13370 1112 aa34.95■■■■□ 3.19
EFNA3-201ENST00000368408 MINK1Q8N4C8 1332 aaPredicted RBP34.95■■■■□ 3.19
EFNA3-201ENST00000368408 ERICH6BQ5W0A0 696 aa34.95■■■■□ 3.18
EFNA3-201ENST00000368408 METP08581 1390 aa34.94■■■■□ 3.18
EFNA3-201ENST00000368408 FAM135BQ49AJ0 1406 aa34.93■■■■□ 3.18
EFNA3-201ENST00000368408 SRPK2P78362 688 aaKnown RBP34.92■■■■□ 3.18
EFNA3-201ENST00000368408 ADAMTS8Q9UP79 889 aa34.92■■■■□ 3.18
EFNA3-201ENST00000368408 POLR3AO14802 1390 aaPredicted RBP34.92■■■■□ 3.18
EFNA3-201ENST00000368408 PLEKHG1Q9ULL1 1385 aa34.92■■■■□ 3.18
EFNA3-201ENST00000368408 SLIT1O75093 1534 aa34.91■■■■□ 3.18
EFNA3-201ENST00000368408 ARHGAP23Q9P227 1491 aa34.91■■■■□ 3.18
EFNA3-201ENST00000368408 CPS1P31327 1500 aa34.9■■■■□ 3.18
EFNA3-201ENST00000368408 WDR43Q15061 677 aaKnown RBP eCLIP34.9■■■■□ 3.18
EFNA3-201ENST00000368408 CEBPAP49715 358 aaPredicted RBP34.89■■■■□ 3.18
EFNA3-201ENST00000368408 ADAMTS13Q76LX8 1427 aa34.89■■■■□ 3.18
EFNA3-201ENST00000368408 CDK19Q9BWU1 502 aa34.88■■■■□ 3.17
EFNA3-201ENST00000368408 A0A1W2PP64 1363 aa34.88■■■■□ 3.17
EFNA3-201ENST00000368408 MORC1Q86VD1 984 aa34.87■■■■□ 3.17
EFNA3-201ENST00000368408 CD163L1Q9NR16 1453 aa34.87■■■■□ 3.17
EFNA3-201ENST00000368408 PLEKHH1Q9ULM0 1364 aa34.86■■■■□ 3.17
EFNA3-201ENST00000368408 RNF123Q5XPI4 1314 aa34.86■■■■□ 3.17
EFNA3-201ENST00000368408 MED14O60244 1454 aa34.85■■■■□ 3.17
EFNA3-201ENST00000368408 TERF2IPQ9NYB0 399 aa34.85■■■■□ 3.17
EFNA3-201ENST00000368408 WAPLQ7Z5K2 1190 aa34.83■■■■□ 3.17
EFNA3-201ENST00000368408 LTKP29376 864 aa34.8■■■■□ 3.16
EFNA3-201ENST00000368408 ATP7BP35670 1465 aa34.78■■■■□ 3.16
EFNA3-201ENST00000368408 RIMS1Q86UR5 1692 aaKnown RBP34.77■■■■□ 3.16
EFNA3-201ENST00000368408 AEBP2Q6ZN18 517 aaPredicted RBP34.77■■■■□ 3.16
EFNA3-201ENST00000368408 ANKRD26Q9UPS8 1709 aa34.76■■■■□ 3.16
EFNA3-201ENST00000368408 BCANQ96GW7 911 aa34.76■■■■□ 3.15
EFNA3-201ENST00000368408 EID1Q9Y6B2 187 aa34.76■■■■□ 3.15
EFNA3-201ENST00000368408 SENP3-EIF4A1A0A087X0R7 540 aa34.75■■■■□ 3.15
EFNA3-201ENST00000368408 TXNDC2Q86VQ3 553 aa34.75■■■■□ 3.15
EFNA3-201ENST00000368408 WASLO00401 505 aaPredicted RBP34.74■■■■□ 3.15
EFNA3-201ENST00000368408 HDGFL2Q7Z4V5 671 aaPredicted RBP34.74■■■■□ 3.15
EFNA3-201ENST00000368408 THEMISQ8N1K5 641 aaPredicted RBP34.73■■■■□ 3.15
EFNA3-201ENST00000368408 SHPRHQ149N8 1683 aa34.73■■■■□ 3.15
EFNA3-201ENST00000368408 DIP2AQ14689 1571 aa34.7■■■■□ 3.15
EFNA3-201ENST00000368408 CABP1Q9NZU7 370 aa34.7■■■■□ 3.15
EFNA3-201ENST00000368408 ADGRB2O60241 1585 aa34.7■■■■□ 3.15
EFNA3-201ENST00000368408 NGEFQ8N5V2 710 aa34.69■■■■□ 3.14
EFNA3-201ENST00000368408 ZNF521Q96K83 1311 aa34.69■■■■□ 3.14
EFNA3-201ENST00000368408 PLPPR3Q6T4P5 718 aa34.67■■■■□ 3.14
EFNA3-201ENST00000368408 TBX22Q9Y458 520 aa34.67■■■■□ 3.14
EFNA3-201ENST00000368408 SALL2Q9Y467 1007 aaPredicted RBP34.67■■■■□ 3.14
EFNA3-201ENST00000368408 ROBO2Q9HCK4 1378 aa34.67■■■■□ 3.14
EFNA3-201ENST00000368408 FYB1O15117 783 aa34.65■■■■□ 3.14
EFNA3-201ENST00000368408 IRX6P78412 446 aaPredicted RBP34.65■■■■□ 3.14
EFNA3-201ENST00000368408 CPSF1Q10570 1443 aaKnown RBP34.65■■■■□ 3.14
EFNA3-201ENST00000368408 KIF20BQ96Q89 1820 aa34.64■■■■□ 3.14
EFNA3-201ENST00000368408 CEP170BQ9Y4F5 1589 aaPredicted RBP34.64■■■■□ 3.14
EFNA3-201ENST00000368408 MTHFSP49914 203 aa34.64■■■■□ 3.14
EFNA3-201ENST00000368408 CFAP53Q96M91 514 aa34.63■■■■□ 3.13
EFNA3-201ENST00000368408 PTPRUQ92729 1446 aa34.62■■■■□ 3.13
EFNA3-201ENST00000368408 CDCA7LQ96GN5 454 aa34.62■■■■□ 3.13
EFNA3-201ENST00000368408 PPP4R2Q9NY27 417 aa34.62■■■■□ 3.13
EFNA3-201ENST00000368408 TNNT2P45379 298 aaPredicted RBP34.61■■■■□ 3.13
EFNA3-201ENST00000368408 PPIP5K1Q6PFW1 1433 aa34.6■■■■□ 3.13
EFNA3-201ENST00000368408 CDC42BPGQ6DT37 1551 aa34.59■■■■□ 3.13
EFNA3-201ENST00000368408 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.58■■■■□ 3.13
EFNA3-201ENST00000368408 PTCH1Q13635 1447 aa34.58■■■■□ 3.13
EFNA3-201ENST00000368408 NUDT16Q96DE0 195 aaKnown RBP34.57■■■■□ 3.12
EFNA3-201ENST00000368408 GGNBP2Q9H3C7 697 aa34.57■■■■□ 3.12
EFNA3-201ENST00000368408 RCAN3Q9UKA8 241 aa34.57■■■■□ 3.12
EFNA3-201ENST00000368408 EDC4Q6P2E9 1401 aaKnown RBP34.56■■■■□ 3.12
EFNA3-201ENST00000368408 CCDC61Q9Y6R9 512 aa34.56■■■■□ 3.12
EFNA3-201ENST00000368408 ZNF142P52746 1687 aaPredicted RBP34.56■■■■□ 3.12
EFNA3-201ENST00000368408 CCDC146Q8IYE0 955 aa34.54■■■■□ 3.12
EFNA3-201ENST00000368408 SLC26A8Q96RN1 970 aa34.54■■■■□ 3.12
EFNA3-201ENST00000368408 MON2Q7Z3U7 1717 aa34.53■■■■□ 3.12
EFNA3-201ENST00000368408 COL3A1P02461 1466 aaPredicted RBP34.52■■■■□ 3.12
EFNA3-201ENST00000368408 APAF1O14727 1248 aa34.52■■■■□ 3.12
EFNA3-201ENST00000368408 AKAP12Q02952 1782 aa34.52■■■■□ 3.12
EFNA3-201ENST00000368408 GOLGA2Q08379 1002 aa34.51■■■■□ 3.12
EFNA3-201ENST00000368408 PIK3R4Q99570 1358 aa34.51■■■■□ 3.11
EFNA3-201ENST00000368408 NCBP3Q53F19 620 aaKnown RBP34.5■■■■□ 3.11
EFNA3-201ENST00000368408 XRN1Q8IZH2 1706 aaKnown RBP34.5■■■■□ 3.11
EFNA3-201ENST00000368408 TOPAZ1Q8N9V7 1692 aa34.5■■■■□ 3.11
EFNA3-201ENST00000368408 TRMT2AQ8IZ69 625 aaKnown RBP34.49■■■■□ 3.11
EFNA3-201ENST00000368408 RUNDC1Q96C34 613 aa34.49■■■■□ 3.11
EFNA3-201ENST00000368408 IQSEC2Q5JU85 1478 aa34.49■■■■□ 3.11
EFNA3-201ENST00000368408 RRP1P56182 461 aaKnown RBP34.48■■■■□ 3.11
EFNA3-201ENST00000368408 AMOTL2Q9Y2J4 779 aa34.48■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms