RNA–Protein interactions for RNA: ENST00000368209.9

HDGF-203, Transcript of heparin binding growth factor, humanhuman

TSL 2 BASIC

Gene HDGF, Length 2,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-203ENST00000368209 CC2D1BQ5T0F9 858 aaKnown RBP18.17■□□□□ 0.5
HDGF-203ENST00000368209 PLEKHH1Q9ULM0 1364 aa18.17■□□□□ 0.5
HDGF-203ENST00000368209 CPS1P31327 1500 aa18.16■□□□□ 0.5
HDGF-203ENST00000368209 ZNF142P52746 1687 aaPredicted RBP18.16■□□□□ 0.5
HDGF-203ENST00000368209 KNSTRNQ9Y448 316 aa18.15■□□□□ 0.5
HDGF-203ENST00000368209 TXNDC2Q86VQ3 553 aa18.14■□□□□ 0.49
HDGF-203ENST00000368209 PNISRQ8TF01 805 aaKnown RBP18.14■□□□□ 0.49
HDGF-203ENST00000368209 SLC12A5Q9H2X9 1139 aa18.14■□□□□ 0.49
HDGF-203ENST00000368209 MINK1Q8N4C8 1332 aaPredicted RBP18.14■□□□□ 0.49
HDGF-203ENST00000368209 WAPLQ7Z5K2 1190 aa18.13■□□□□ 0.49
HDGF-203ENST00000368209 NLRP13Q86W25 1043 aa18.13■□□□□ 0.49
HDGF-203ENST00000368209 FAM9BQ8IZU0 186 aa18.13■□□□□ 0.49
HDGF-203ENST00000368209 THEMISQ8N1K5 641 aaPredicted RBP18.13■□□□□ 0.49
HDGF-203ENST00000368209 CABP2Q9NPB3 220 aa18.13■□□□□ 0.49
HDGF-203ENST00000368209 POGKQ9P215 609 aa18.13■□□□□ 0.49
HDGF-203ENST00000368209 FAM135BQ49AJ0 1406 aa18.13■□□□□ 0.49
HDGF-203ENST00000368209 USP32Q8NFA0 1604 aa18.12■□□□□ 0.49
HDGF-203ENST00000368209 SIRT1Q96EB6 747 aa18.11■□□□□ 0.49
HDGF-203ENST00000368209 PTPRUQ92729 1446 aa18.11■□□□□ 0.49
HDGF-203ENST00000368209 SETD1BQ9UPS6 1966 aaKnown RBP18.1■□□□□ 0.49
HDGF-203ENST00000368209 TMC1Q8TDI8 760 aa18.1■□□□□ 0.49
HDGF-203ENST00000368209 EID1Q9Y6B2 187 aa18.1■□□□□ 0.49
HDGF-203ENST00000368209 HNRNPUQ00839 825 aaKnown RBP eCLIP18.1■□□□□ 0.49
HDGF-203ENST00000368209 ANKRD36BQ8N2N9 1353 aa18.1■□□□□ 0.49
HDGF-203ENST00000368209 NSD3Q9BZ95 1437 aa18.09■□□□□ 0.49
HDGF-203ENST00000368209 CD163L1Q9NR16 1453 aa18.09■□□□□ 0.49
HDGF-203ENST00000368209 ROBO2Q9HCK4 1378 aa18.08■□□□□ 0.49
HDGF-203ENST00000368209 NINLQ9Y2I6 1382 aa18.08■□□□□ 0.49
HDGF-203ENST00000368209 DIP2AQ14689 1571 aa18.08■□□□□ 0.48
HDGF-203ENST00000368209 ATAD2Q6PL18 1390 aa18.08■□□□□ 0.48
HDGF-203ENST00000368209 CDK19Q9BWU1 502 aa18.07■□□□□ 0.48
HDGF-203ENST00000368209 PPP2R1AP30153 589 aa18.06■□□□□ 0.48
HDGF-203ENST00000368209 SRPK2P78362 688 aaKnown RBP18.06■□□□□ 0.48
HDGF-203ENST00000368209 BCANQ96GW7 911 aa18.06■□□□□ 0.48
HDGF-203ENST00000368209 SLC26A8Q96RN1 970 aa18.06■□□□□ 0.48
HDGF-203ENST00000368209 TBX22Q9Y458 520 aa18.06■□□□□ 0.48
HDGF-203ENST00000368209 GTF3C3Q9Y5Q9 886 aa18.06■□□□□ 0.48
HDGF-203ENST00000368209 A0A1W2PP64 1363 aa18.05■□□□□ 0.48
HDGF-203ENST00000368209 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.05■□□□□ 0.48
HDGF-203ENST00000368209 ADGRB2O60241 1585 aa18.04■□□□□ 0.48
HDGF-203ENST00000368209 XRN1Q8IZH2 1706 aaKnown RBP18.03■□□□□ 0.48
HDGF-203ENST00000368209 ZBED9Q6R2W3 1325 aa18.02■□□□□ 0.47
HDGF-203ENST00000368209 WASLO00401 505 aaPredicted RBP18.01■□□□□ 0.47
HDGF-203ENST00000368209 PTCH1Q13635 1447 aa18.01■□□□□ 0.47
HDGF-203ENST00000368209 INSRP06213 1382 aa17.99■□□□□ 0.47
HDGF-203ENST00000368209 AMOTL2Q9Y2J4 779 aa17.98■□□□□ 0.47
HDGF-203ENST00000368209 CABP1Q9NZU7 370 aa17.98■□□□□ 0.47
HDGF-203ENST00000368209 ATP7BP35670 1465 aa17.98■□□□□ 0.47
HDGF-203ENST00000368209 CGNL1Q0VF96 1302 aa17.98■□□□□ 0.47
HDGF-203ENST00000368209 NSD2O96028 1365 aa17.97■□□□□ 0.47
HDGF-203ENST00000368209 PIK3R4Q99570 1358 aa17.97■□□□□ 0.47
HDGF-203ENST00000368209 ANKLE2Q86XL3 938 aa17.96■□□□□ 0.47
HDGF-203ENST00000368209 BLMP54132 1417 aaPredicted RBP17.96■□□□□ 0.47
HDGF-203ENST00000368209 PRR36Q9H6K5 1346 aa17.95■□□□□ 0.46
HDGF-203ENST00000368209 CPSF1Q10570 1443 aaKnown RBP17.95■□□□□ 0.46
HDGF-203ENST00000368209 TERF2IPQ9NYB0 399 aa17.95■□□□□ 0.46
HDGF-203ENST00000368209 TOPAZ1Q8N9V7 1692 aa17.95■□□□□ 0.46
HDGF-203ENST00000368209 ANKRD26Q9UPS8 1709 aa17.95■□□□□ 0.46
HDGF-203ENST00000368209 CHD2O14647 1828 aaKnown RBP17.94■□□□□ 0.46
HDGF-203ENST00000368209 PPIP5K1Q6PFW1 1433 aa17.94■□□□□ 0.46
HDGF-203ENST00000368209 CDC42BPGQ6DT37 1551 aa17.93■□□□□ 0.46
HDGF-203ENST00000368209 NCKAP5LQ9HCH0 1330 aa17.93■□□□□ 0.46
HDGF-203ENST00000368209 NUDT16Q96DE0 195 aaKnown RBP17.93■□□□□ 0.46
HDGF-203ENST00000368209 MORC1Q86VD1 984 aa17.92■□□□□ 0.46
HDGF-203ENST00000368209 AKAP12Q02952 1782 aa17.91■□□□□ 0.46
HDGF-203ENST00000368209 MON2Q7Z3U7 1717 aa17.91■□□□□ 0.46
HDGF-203ENST00000368209 POLR3AO14802 1390 aaPredicted RBP17.91■□□□□ 0.46
HDGF-203ENST00000368209 KIF20BQ96Q89 1820 aa17.91■□□□□ 0.46
HDGF-203ENST00000368209 FYB1O15117 783 aa17.91■□□□□ 0.46
HDGF-203ENST00000368209 KCNA6P17658 529 aa17.91■□□□□ 0.46
HDGF-203ENST00000368209 HDGFL2Q7Z4V5 671 aaPredicted RBP17.9■□□□□ 0.46
HDGF-203ENST00000368209 ADAMTS8Q9UP79 889 aa17.9■□□□□ 0.46
HDGF-203ENST00000368209 CCDC61Q9Y6R9 512 aa17.9■□□□□ 0.46
HDGF-203ENST00000368209 SHPRHQ149N8 1683 aa17.9■□□□□ 0.46
HDGF-203ENST00000368209 NPHP4O75161 1426 aaPredicted RBP17.89■□□□□ 0.45
HDGF-203ENST00000368209 SENP3-EIF4A1A0A087X0R7 540 aa17.88■□□□□ 0.45
HDGF-203ENST00000368209 NKTRP30414 1462 aaKnown RBP17.88■□□□□ 0.45
HDGF-203ENST00000368209 GGNBP2Q9H3C7 697 aa17.87■□□□□ 0.45
HDGF-203ENST00000368209 EDC4Q6P2E9 1401 aaKnown RBP17.87■□□□□ 0.45
HDGF-203ENST00000368209 ITSN1Q15811 1721 aa17.87■□□□□ 0.45
HDGF-203ENST00000368209 TNNT2P45379 298 aaPredicted RBP17.86■□□□□ 0.45
HDGF-203ENST00000368209 NRKQ7Z2Y5 1582 aa17.86■□□□□ 0.45
HDGF-203ENST00000368209 NALCNQ8IZF0 1738 aa17.84■□□□□ 0.45
HDGF-203ENST00000368209 PLEKHG3A1L390 1219 aa17.84■□□□□ 0.45
HDGF-203ENST00000368209 SMG6Q86US8 1419 aaKnown RBP17.83■□□□□ 0.45
HDGF-203ENST00000368209 RGPD8O14715 1765 aaPredicted RBP17.83■□□□□ 0.45
HDGF-203ENST00000368209 MTHFSP49914 203 aa17.83■□□□□ 0.45
HDGF-203ENST00000368209 NWD1Q149M9 1564 aa17.83■□□□□ 0.44
HDGF-203ENST00000368209 WDR43Q15061 677 aaKnown RBP eCLIP17.83■□□□□ 0.446e-7■□□□□ 10.3
HDGF-203ENST00000368209 FMN2Q9NZ56 1722 aa17.83■□□□□ 0.44
HDGF-203ENST00000368209 KDM4FA0A1W2PPD8 638 aa17.82■□□□□ 0.44
HDGF-203ENST00000368209 COL3A1P02461 1466 aaPredicted RBP17.82■□□□□ 0.44
HDGF-203ENST00000368209 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.81■□□□□ 0.44
HDGF-203ENST00000368209 SSH2Q76I76 1423 aa17.8■□□□□ 0.44
HDGF-203ENST00000368209 NUTM2FA1L443 756 aa17.8■□□□□ 0.44
HDGF-203ENST00000368209 ZNF692Q9BU19 519 aaPredicted RBP17.79■□□□□ 0.44
HDGF-203ENST00000368209 ACEP12821 1306 aa17.79■□□□□ 0.44
HDGF-203ENST00000368209 ANKARQ7Z5J8 1434 aa17.79■□□□□ 0.44
HDGF-203ENST00000368209 USP6P35125 1406 aa17.79■□□□□ 0.44
HDGF-203ENST00000368209 NME9Q86XW9 330 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms