RNA–Protein interactions for RNA: ENST00000368063.5

NCSTN-202, Transcript of nicastrin, humanhuman

TSL 1 (best) BASIC

Gene NCSTN, Length 3,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-202ENST00000368063 TAF3Q5VWG9 929 aa16.38■□□□□ 0.21
NCSTN-202ENST00000368063 CLEC17AQ6ZS10 378 aa16.38■□□□□ 0.21
NCSTN-202ENST00000368063 VGLL3A8MV65 326 aa16.37■□□□□ 0.21
NCSTN-202ENST00000368063 PKD2Q13563 968 aa16.37■□□□□ 0.21
NCSTN-202ENST00000368063 FAM135AQ9P2D6 1515 aa16.37■□□□□ 0.21
NCSTN-202ENST00000368063 RBSNQ9H1K0 784 aa16.37■□□□□ 0.21
NCSTN-202ENST00000368063 TRPM1Q7Z4N2 1603 aa16.36■□□□□ 0.21
NCSTN-202ENST00000368063 JPH4Q96JJ6 628 aa16.36■□□□□ 0.21
NCSTN-202ENST00000368063 ITSN2Q9NZM3 1697 aa16.36■□□□□ 0.21
NCSTN-202ENST00000368063 HSP90AB1P08238 724 aaKnown RBP16.36■□□□□ 0.21
NCSTN-202ENST00000368063 JARID2Q92833 1246 aaPredicted RBP16.36■□□□□ 0.21
NCSTN-202ENST00000368063 TROQ12816 1431 aaPredicted RBP16.36■□□□□ 0.21
NCSTN-202ENST00000368063 DDX49Q9Y6V7 483 aaKnown RBP16.35■□□□□ 0.21
NCSTN-202ENST00000368063 DISP3Q9P2K9 1392 aa16.35■□□□□ 0.21
NCSTN-202ENST00000368063 ABCC2Q92887 1545 aa16.35■□□□□ 0.21
NCSTN-202ENST00000368063 E9PSI1 815 aa16.35■□□□□ 0.21
NCSTN-202ENST00000368063 RBM25P49756 843 aaKnown RBP16.35■□□□□ 0.21
NCSTN-202ENST00000368063 GTF2F1P35269 517 aaKnown RBP eCLIP16.35■□□□□ 0.21
NCSTN-202ENST00000368063 RSPH4AQ5TD94 716 aa16.35■□□□□ 0.21
NCSTN-202ENST00000368063 ABCA8O94911 1581 aa16.34■□□□□ 0.21
NCSTN-202ENST00000368063 PPP2R1AP30153 589 aa16.33■□□□□ 0.21
NCSTN-202ENST00000368063 SSFA2P28290 1259 aa16.33■□□□□ 0.2
NCSTN-202ENST00000368063 ZSCAN23Q3MJ62 389 aa16.33■□□□□ 0.2
NCSTN-202ENST00000368063 CCDC39Q9UFE4 941 aa16.33■□□□□ 0.2
NCSTN-202ENST00000368063 ADGBQ8N7X0 1667 aa16.33■□□□□ 0.2
NCSTN-202ENST00000368063 GOLGA6L22H0YM25 854 aa16.32■□□□□ 0.2
NCSTN-202ENST00000368063 TSC1Q92574 1164 aa16.32■□□□□ 0.2
NCSTN-202ENST00000368063 KDM2AQ9Y2K7 1162 aa16.32■□□□□ 0.2
NCSTN-202ENST00000368063 AEBP2Q6ZN18 517 aaPredicted RBP16.32■□□□□ 0.2
NCSTN-202ENST00000368063 DMRT2Q9Y5R5 561 aa16.32■□□□□ 0.2
NCSTN-202ENST00000368063 KDM5DQ9BY66 1539 aa16.31■□□□□ 0.2
NCSTN-202ENST00000368063 BAG4O95429 457 aaKnown RBP16.31■□□□□ 0.2
NCSTN-202ENST00000368063 ZBTB22O15209 634 aa16.3■□□□□ 0.2
NCSTN-202ENST00000368063 FBLN2P98095 1184 aa16.3■□□□□ 0.2
NCSTN-202ENST00000368063 PAXIP1Q6ZW49 1069 aaPredicted RBP16.3■□□□□ 0.2
NCSTN-202ENST00000368063 PRIMPOLQ96LW4 560 aa16.3■□□□□ 0.2
NCSTN-202ENST00000368063 RWDD1Q9H446 243 aaPredicted RBP16.3■□□□□ 0.2
NCSTN-202ENST00000368063 PLCD3Q8N3E9 789 aa16.3■□□□□ 0.2
NCSTN-202ENST00000368063 TESK2Q96S53 571 aa16.29■□□□□ 0.2
NCSTN-202ENST00000368063 LAMC1P11047 1609 aa16.29■□□□□ 0.2
NCSTN-202ENST00000368063 CCDC146Q8IYE0 955 aa16.29■□□□□ 0.2
NCSTN-202ENST00000368063 PLB1Q6P1J6 1458 aa16.29■□□□□ 0.2
NCSTN-202ENST00000368063 RLBP1P12271 317 aa16.29■□□□□ 0.2
NCSTN-202ENST00000368063 PRIM1P49642 420 aaKnown RBP16.29■□□□□ 0.2
NCSTN-202ENST00000368063 HMGN5P82970 282 aaKnown RBP16.29■□□□□ 0.2
NCSTN-202ENST00000368063 CGNQ9P2M7 1197 aaKnown RBP16.29■□□□□ 0.2
NCSTN-202ENST00000368063 CAVIN1Q6NZI2 390 aaKnown RBP16.28■□□□□ 0.2
NCSTN-202ENST00000368063 PRAG1Q86YV5 1406 aa16.28■□□□□ 0.2
NCSTN-202ENST00000368063 ZNF644Q9H582 1327 aaPredicted RBP16.28■□□□□ 0.2
NCSTN-202ENST00000368063 GPRASP1Q5JY77 1395 aa16.28■□□□□ 0.2
NCSTN-202ENST00000368063 APAF1O14727 1248 aa16.28■□□□□ 0.2
NCSTN-202ENST00000368063 PRDM15P57071 1507 aaPredicted RBP16.28■□□□□ 0.2
NCSTN-202ENST00000368063 PIK3C2GO75747 1445 aa16.28■□□□□ 0.2
NCSTN-202ENST00000368063 KIAA2012Q0VF49 1180 aa16.27■□□□□ 0.2
NCSTN-202ENST00000368063 CHD1O14646 1710 aa16.27■□□□□ 0.2
NCSTN-202ENST00000368063 CD2BP2O95400 341 aaKnown RBP16.27■□□□□ 0.2
NCSTN-202ENST00000368063 ERBINQ96RT1 1412 aa16.27■□□□□ 0.19
NCSTN-202ENST00000368063 KIF2CQ99661 725 aa16.27■□□□□ 0.19
NCSTN-202ENST00000368063 TNNQ9UQP3 1299 aa16.26■□□□□ 0.19
NCSTN-202ENST00000368063 ADGRL2O95490 1459 aa16.26■□□□□ 0.19
NCSTN-202ENST00000368063 FOXD4L1Q9NU39 408 aa16.26■□□□□ 0.19
NCSTN-202ENST00000368063 MAGI2Q86UL8 1455 aa16.26■□□□□ 0.19
NCSTN-202ENST00000368063 FTSJ3Q8IY81 847 aaKnown RBP16.25■□□□□ 0.19
NCSTN-202ENST00000368063 SPDYE4A6NLX3 237 aa16.24■□□□□ 0.19
NCSTN-202ENST00000368063 LMBRD1Q9NUN5 540 aa16.24■□□□□ 0.19
NCSTN-202ENST00000368063 K7ELQ4 463 aaPredicted RBP16.24■□□□□ 0.19
NCSTN-202ENST00000368063 NBPF1Q3BBV0 1214 aa16.24■□□□□ 0.19
NCSTN-202ENST00000368063 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.24■□□□□ 0.194e-6■■□□□ 11.4
NCSTN-202ENST00000368063 IRX5P78411 483 aaPredicted RBP16.23■□□□□ 0.19
NCSTN-202ENST00000368063 GAS2L2Q8NHY3 880 aa16.23■□□□□ 0.19
NCSTN-202ENST00000368063 BCL2L12Q9HB09 334 aa16.23■□□□□ 0.19
NCSTN-202ENST00000368063 PRG4Q92954 1404 aaPredicted RBP16.23■□□□□ 0.19
NCSTN-202ENST00000368063 ABCC10Q5T3U5 1492 aa16.23■□□□□ 0.19
NCSTN-202ENST00000368063 IGSF3O75054 1194 aa16.23■□□□□ 0.19
NCSTN-202ENST00000368063 RARSP54136 660 aaKnown RBP16.23■□□□□ 0.19
NCSTN-202ENST00000368063 GPATCH8Q9UKJ3 1502 aaKnown RBP16.22■□□□□ 0.19
NCSTN-202ENST00000368063 WDR7Q9Y4E6 1490 aa16.22■□□□□ 0.19
NCSTN-202ENST00000368063 CDK11BP21127 795 aaKnown RBP16.22■□□□□ 0.19
NCSTN-202ENST00000368063 KIF3AQ9Y496 699 aa16.22■□□□□ 0.19
NCSTN-202ENST00000368063 CROCC2H7BZ55 1655 aa16.22■□□□□ 0.19
NCSTN-202ENST00000368063 AK9Q5TCS8 1911 aa16.22■□□□□ 0.19
NCSTN-202ENST00000368063 VGFO15240 615 aaPredicted RBP16.21■□□□□ 0.19
NCSTN-202ENST00000368063 SLC20A2Q08357 652 aa16.21■□□□□ 0.19
NCSTN-202ENST00000368063 AMER1Q5JTC6 1135 aaPredicted RBP16.21■□□□□ 0.19
NCSTN-202ENST00000368063 MCTP1Q6DN14 999 aa16.21■□□□□ 0.19
NCSTN-202ENST00000368063 PDCL2Q8N4E4 241 aa16.21■□□□□ 0.19
NCSTN-202ENST00000368063 FAM177BA6PVY3 158 aa16.21■□□□□ 0.18
NCSTN-202ENST00000368063 DNTTIP2Q5QJE6 756 aaKnown RBP16.21■□□□□ 0.18
NCSTN-202ENST00000368063 LRSAM1Q6UWE0 723 aa16.21■□□□□ 0.18
NCSTN-202ENST00000368063 ATP10BO94823 1461 aa16.21■□□□□ 0.18
NCSTN-202ENST00000368063 NGEFQ8N5V2 710 aa16.2■□□□□ 0.18
NCSTN-202ENST00000368063 PIBF1Q8WXW3 757 aa16.2■□□□□ 0.18
NCSTN-202ENST00000368063 PTPRGP23470 1445 aa16.19■□□□□ 0.18
NCSTN-202ENST00000368063 PLEKHD1A6NEE1 506 aa16.19■□□□□ 0.18
NCSTN-202ENST00000368063 CYP2E1P05181 493 aaPredicted RBP16.19■□□□□ 0.18
NCSTN-202ENST00000368063 U2AF2P26368 475 aaKnown RBP eCLIP16.19■□□□□ 0.187e-9■□□□□ 10.9
NCSTN-202ENST00000368063 ZNF771Q7L3S4 317 aaPredicted RBP16.19■□□□□ 0.18
NCSTN-202ENST00000368063 ANKRD7Q92527 254 aa16.19■□□□□ 0.18
NCSTN-202ENST00000368063 RBM27Q9P2N5 1060 aaKnown RBP16.19■□□□□ 0.18
NCSTN-202ENST00000368063 ARID3CA6NKF2 412 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms