RNA–Protein interactions for RNA: ENST00000367868.3

GPA33-201, Transcript of glycoprotein A33, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPA33, Length 2,802 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPA33-201ENST00000367868 NPC1L1Q9UHC9 1359 aa16.95■□□□□ 0.3
GPA33-201ENST00000367868 TNPO1Q92973 898 aaKnown RBP16.94■□□□□ 0.3
GPA33-201ENST00000367868 ZNF692Q9BU19 519 aaPredicted RBP16.94■□□□□ 0.3
GPA33-201ENST00000367868 IQGAP1P46940 1657 aa16.94■□□□□ 0.3
GPA33-201ENST00000367868 DDX11L8A8MPP1 907 aa16.94■□□□□ 0.3
GPA33-201ENST00000367868 DZIP1LQ8IYY4 767 aaKnown RBP16.94■□□□□ 0.3
GPA33-201ENST00000367868 SLC12A5Q9H2X9 1139 aa16.94■□□□□ 0.3
GPA33-201ENST00000367868 IQGAP3Q86VI3 1631 aa16.94■□□□□ 0.3
GPA33-201ENST00000367868 RRP9O43818 475 aaKnown RBP16.93■□□□□ 0.3
GPA33-201ENST00000367868 MTHFSP49914 203 aa16.93■□□□□ 0.3
GPA33-201ENST00000367868 ZKSCAN2Q63HK3 967 aa16.93■□□□□ 0.3
GPA33-201ENST00000367868 SMC4Q9NTJ3 1288 aa16.93■□□□□ 0.3
GPA33-201ENST00000367868 HSP90AB1P08238 724 aaKnown RBP16.92■□□□□ 0.3
GPA33-201ENST00000367868 U2AF1L5P0DN76 240 aaPredicted RBP16.92■□□□□ 0.3
GPA33-201ENST00000367868 U2AF1Q01081 240 aaKnown RBP eCLIP16.92■□□□□ 0.3
GPA33-201ENST00000367868 LNPKQ9C0E8 428 aa16.92■□□□□ 0.3
GPA33-201ENST00000367868 ADGRF5Q8IZF2 1346 aa16.91■□□□□ 0.3
GPA33-201ENST00000367868 NGEFQ8N5V2 710 aa16.91■□□□□ 0.3
GPA33-201ENST00000367868 PREX2Q70Z35 1606 aa16.91■□□□□ 0.3
GPA33-201ENST00000367868 NSD3Q9BZ95 1437 aa16.9■□□□□ 0.3
GPA33-201ENST00000367868 POLR3AO14802 1390 aaPredicted RBP16.9■□□□□ 0.3
GPA33-201ENST00000367868 TRIM27P14373 513 aa16.9■□□□□ 0.3
GPA33-201ENST00000367868 ERVK-7P63135 1459 aa16.9■□□□□ 0.3
GPA33-201ENST00000367868 MAST1Q9Y2H9 1570 aa16.89■□□□□ 0.3
GPA33-201ENST00000367868 PLXNC1O60486 1568 aa16.89■□□□□ 0.29
GPA33-201ENST00000367868 TTC37Q6PGP7 1564 aa16.89■□□□□ 0.29
GPA33-201ENST00000367868 ATP10AO60312 1499 aa16.89■□□□□ 0.29
GPA33-201ENST00000367868 EXOSC9Q06265 439 aaKnown RBP16.89■□□□□ 0.29
GPA33-201ENST00000367868 TRAK1Q9UPV9 953 aa16.89■□□□□ 0.29
GPA33-201ENST00000367868 CD2BP2O95400 341 aaKnown RBP16.88■□□□□ 0.29
GPA33-201ENST00000367868 WDR63Q8IWG1 891 aa16.88■□□□□ 0.29
GPA33-201ENST00000367868 SENP3Q9H4L4 574 aaPredicted RBP16.88■□□□□ 0.29
GPA33-201ENST00000367868 KDM5AP29375 1690 aaKnown RBP16.88■□□□□ 0.29
GPA33-201ENST00000367868 RBM42Q9BTD8 480 aaKnown RBP16.88■□□□□ 0.29
GPA33-201ENST00000367868 CHGAP10645 457 aaKnown RBP16.87■□□□□ 0.29
GPA33-201ENST00000367868 AFAP1Q8N556 730 aa16.87■□□□□ 0.29
GPA33-201ENST00000367868 SSH1Q8WYL5 1049 aa16.87■□□□□ 0.29
GPA33-201ENST00000367868 AAMPQ13685 434 aa16.86■□□□□ 0.29
GPA33-201ENST00000367868 TMEM57Q8N5G2 664 aa16.86■□□□□ 0.29
GPA33-201ENST00000367868 NOB1Q9ULX3 412 aaKnown RBP16.86■□□□□ 0.29
GPA33-201ENST00000367868 CEP152O94986 1710 aa16.86■□□□□ 0.29
GPA33-201ENST00000367868 PHF23Q9BUL5 403 aaPredicted RBP16.85■□□□□ 0.29
GPA33-201ENST00000367868 DUOX2Q9NRD8 1548 aa16.85■□□□□ 0.29
GPA33-201ENST00000367868 SCAPERQ9BY12 1400 aa16.85■□□□□ 0.29
GPA33-201ENST00000367868 U2SURPO15042 1029 aaKnown RBP16.85■□□□□ 0.29
GPA33-201ENST00000367868 KIAA1211Q6ZU35 1233 aa16.85■□□□□ 0.29
GPA33-201ENST00000367868 ERCC6Q03468 1493 aa16.85■□□□□ 0.29
GPA33-201ENST00000367868 GBP4Q96PP9 640 aa16.84■□□□□ 0.29
GPA33-201ENST00000367868 SSFA2P28290 1259 aa16.84■□□□□ 0.29
GPA33-201ENST00000367868 DDIT3P35638 169 aa16.84■□□□□ 0.29
GPA33-201ENST00000367868 RBM10P98175 930 aaKnown RBP16.84■□□□□ 0.29
GPA33-201ENST00000367868 ZMYM3Q14202 1370 aa16.83■□□□□ 0.28
GPA33-201ENST00000367868 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.83■□□□□ 0.28
GPA33-201ENST00000367868 ARID3AQ99856 593 aa16.83■□□□□ 0.28
GPA33-201ENST00000367868 TMEM132EQ6IEE7 984 aa16.82■□□□□ 0.28
GPA33-201ENST00000367868 CFAP53Q96M91 514 aa16.82■□□□□ 0.28
GPA33-201ENST00000367868 RAB3GAP1Q15042 981 aa16.82■□□□□ 0.28
GPA33-201ENST00000367868 ATF7IPQ6VMQ6 1270 aa16.82■□□□□ 0.28
GPA33-201ENST00000367868 C1orf115Q9H7X2 142 aa16.82■□□□□ 0.28
GPA33-201ENST00000367868 DDX19BQ9UMR2 479 aa16.82■□□□□ 0.28
GPA33-201ENST00000367868 TRAPPC8Q9Y2L5 1435 aa16.82■□□□□ 0.28
GPA33-201ENST00000367868 IQSEC2Q5JU85 1478 aa16.81■□□□□ 0.28
GPA33-201ENST00000367868 CLTCL1P53675 1640 aa16.81■□□□□ 0.28
GPA33-201ENST00000367868 NCLP19338 710 aaKnown RBP16.81■□□□□ 0.28
GPA33-201ENST00000367868 NASPP49321 788 aaPredicted RBP16.81■□□□□ 0.28
GPA33-201ENST00000367868 HDAC1Q13547 482 aaPredicted RBP16.81■□□□□ 0.28
GPA33-201ENST00000367868 UGGT1Q9NYU2 1555 aa16.81■□□□□ 0.28
GPA33-201ENST00000367868 SHPRHQ149N8 1683 aa16.8■□□□□ 0.28
GPA33-201ENST00000367868 SPHKAPQ2M3C7 1700 aa16.8■□□□□ 0.28
GPA33-201ENST00000367868 SMC5Q8IY18 1101 aa16.8■□□□□ 0.28
GPA33-201ENST00000367868 RBM25P49756 843 aaKnown RBP16.8■□□□□ 0.28
GPA33-201ENST00000367868 SPAG9O60271 1321 aaKnown RBP16.79■□□□□ 0.28
GPA33-201ENST00000367868 KIF3BO15066 747 aa16.79■□□□□ 0.28
GPA33-201ENST00000367868 DDX49Q9Y6V7 483 aaKnown RBP16.79■□□□□ 0.28
GPA33-201ENST00000367868 ANKRD45Q5TZF3 282 aa16.79■□□□□ 0.28
GPA33-201ENST00000367868 GAS2L2Q8NHY3 880 aa16.79■□□□□ 0.28
GPA33-201ENST00000367868 KIF2CQ99661 725 aa16.79■□□□□ 0.28
GPA33-201ENST00000367868 SAFB2Q14151 953 aaKnown RBP eCLIP16.78■□□□□ 0.28
GPA33-201ENST00000367868 NCOA3Q9Y6Q9 1424 aa16.78■□□□□ 0.28
GPA33-201ENST00000367868 SNX21Q969T3 373 aa16.78■□□□□ 0.28
GPA33-201ENST00000367868 NUTM2DQ5VT03 806 aaPredicted RBP16.77■□□□□ 0.28
GPA33-201ENST00000367868 CHD1LQ86WJ1 897 aa16.77■□□□□ 0.28
GPA33-201ENST00000367868 ZBTB40Q9NUA8 1239 aa16.77■□□□□ 0.28
GPA33-201ENST00000367868 PTPRTO14522 1441 aa16.77■□□□□ 0.28
GPA33-201ENST00000367868 NUCB1Q02818 461 aa16.77■□□□□ 0.27
GPA33-201ENST00000367868 CCDC27Q2M243 656 aa16.77■□□□□ 0.27
GPA33-201ENST00000367868 EFCAB2Q5VUJ9 269 aa16.77■□□□□ 0.27
GPA33-201ENST00000367868 ISY1Q9ULR0 285 aaKnown RBP16.77■□□□□ 0.27
GPA33-201ENST00000367868 TRPM2O94759 1503 aa16.77■□□□□ 0.27
GPA33-201ENST00000367868 K7ELQ4 463 aaPredicted RBP16.75■□□□□ 0.27
GPA33-201ENST00000367868 TPM2P07951 284 aa16.75■□□□□ 0.27
GPA33-201ENST00000367868 MSNP26038 577 aaKnown RBP16.75■□□□□ 0.27
GPA33-201ENST00000367868 SKOR2Q2VWA4 1001 aaPredicted RBP16.75■□□□□ 0.27
GPA33-201ENST00000367868 ANP32BQ92688 251 aaKnown RBP16.75■□□□□ 0.27
GPA33-201ENST00000367868 AK9Q5TCS8 1911 aa16.75■□□□□ 0.27
GPA33-201ENST00000367868 ZBTB7CA1YPR0 619 aa16.74■□□□□ 0.27
GPA33-201ENST00000367868 CCDC173Q0VFZ6 552 aa16.74■□□□□ 0.27
GPA33-201ENST00000367868 FAM13BQ9NYF5 915 aa16.74■□□□□ 0.27
GPA33-201ENST00000367868 ZNF518AQ6AHZ1 1483 aa16.74■□□□□ 0.27
GPA33-201ENST00000367868 TMPOP42166 694 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms